RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 CHMP4CQ96CF2 233 aa6□□□□□ -1.45
ATXN3-202ENST00000359366 ZKSCAN3Q9BRR0 538 aa6□□□□□ -1.45
ATXN3-202ENST00000359366 TMEM106CQ9BVX2 250 aa6□□□□□ -1.45
ATXN3-202ENST00000359366 TOMM22Q9NS69 142 aa6□□□□□ -1.45
ATXN3-202ENST00000359366 CNPY2Q9Y2B0 182 aa6□□□□□ -1.45
ATXN3-202ENST00000359366 DDX11L8A8MPP1 907 aa6□□□□□ -1.45
ATXN3-202ENST00000359366 MINDY4BA8MYZ0 360 aa6□□□□□ -1.45
ATXN3-202ENST00000359366 RIMBP2O15034 1052 aa6□□□□□ -1.45
ATXN3-202ENST00000359366 STX6O43752 255 aa6□□□□□ -1.45
ATXN3-202ENST00000359366 GADD45BO75293 160 aaPredicted RBP6□□□□□ -1.45
ATXN3-202ENST00000359366 ECM2O94769 699 aaPredicted RBP6□□□□□ -1.45
ATXN3-202ENST00000359366 UFL1O94874 794 aa6□□□□□ -1.45
ATXN3-202ENST00000359366 TDO2P48775 406 aa6□□□□□ -1.45
ATXN3-202ENST00000359366 GUCY1B3Q02153 619 aa6□□□□□ -1.45
ATXN3-202ENST00000359366 MECOMQ03112 1051 aa6□□□□□ -1.45
ATXN3-202ENST00000359366 FBXO33Q7Z6M2 555 aa6□□□□□ -1.45
ATXN3-202ENST00000359366 IFNL3Q8IZI9 196 aa6□□□□□ -1.45
ATXN3-202ENST00000359366 MYL10Q9BUA6 226 aa6□□□□□ -1.45
ATXN3-202ENST00000359366 GNL3LQ9NVN8 582 aaKnown RBP6□□□□□ -1.45
ATXN3-202ENST00000359366 AATFQ9NY61 560 aaKnown RBP eCLIP6□□□□□ -1.45
ATXN3-202ENST00000359366 ZSCAN21Q9Y5A6 473 aaPredicted RBP6□□□□□ -1.45
ATXN3-202ENST00000359366 PCDHB13Q9Y5F0 798 aa6□□□□□ -1.45
ATXN3-202ENST00000359366 DDX49Q9Y6V7 483 aaKnown RBP6□□□□□ -1.45
ATXN3-202ENST00000359366 DOCK2Q92608 1830 aa5.99□□□□□ -1.45
ATXN3-202ENST00000359366 PNPLA7Q6ZV29 1317 aa5.99□□□□□ -1.45
ATXN3-202ENST00000359366 PRDM1O75626 825 aa5.99□□□□□ -1.45
ATXN3-202ENST00000359366 CTDNEP1O95476 244 aa5.99□□□□□ -1.45
ATXN3-202ENST00000359366 DIXDC1Q155Q3 683 aa5.99□□□□□ -1.45
ATXN3-202ENST00000359366 LARP1BQ659C4 914 aaKnown RBP5.99□□□□□ -1.45
ATXN3-202ENST00000359366 MTERF4Q7Z6M4 381 aaKnown RBP5.99□□□□□ -1.45
ATXN3-202ENST00000359366 GTF3C6Q969F1 213 aa5.99□□□□□ -1.45
ATXN3-202ENST00000359366 FBXW7Q969H0 707 aa5.99□□□□□ -1.45
ATXN3-202ENST00000359366 ZSCAN31Q96LW9 406 aaPredicted RBP5.99□□□□□ -1.45
ATXN3-202ENST00000359366 NAPBQ9H115 298 aa5.99□□□□□ -1.45
ATXN3-202ENST00000359366 SH2B1Q9NRF2 756 aaPredicted RBP5.99□□□□□ -1.45
ATXN3-202ENST00000359366 GJB4Q9NTQ9 266 aa5.99□□□□□ -1.45
ATXN3-202ENST00000359366 LMBRD1Q9NUN5 540 aa5.99□□□□□ -1.45
ATXN3-202ENST00000359366 POLLQ9UGP5 575 aa5.99□□□□□ -1.45
ATXN3-202ENST00000359366 BAZ2BQ9UIF8 2168 aaKnown RBP5.99□□□□□ -1.45
ATXN3-202ENST00000359366 MAGEB6P1A0A0J9YX57 407 aa5.99□□□□□ -1.45
ATXN3-202ENST00000359366 UBE2Q2LH0YL09 131 aa5.99□□□□□ -1.45
ATXN3-202ENST00000359366 C6orf229H3BNL8 230 aa5.99□□□□□ -1.45
ATXN3-202ENST00000359366 FIBPO43427 364 aa5.99□□□□□ -1.45
ATXN3-202ENST00000359366 ZSCAN22P10073 491 aaPredicted RBP5.99□□□□□ -1.45
ATXN3-202ENST00000359366 DNM1Q05193 864 aaKnown RBP5.99□□□□□ -1.45
ATXN3-202ENST00000359366 TMEM132AQ24JP5 1023 aa5.99□□□□□ -1.45
ATXN3-202ENST00000359366 OTUD7BQ6GQQ9 843 aa5.99□□□□□ -1.45
ATXN3-202ENST00000359366 NAA16Q6N069 864 aaPredicted RBP5.99□□□□□ -1.45
ATXN3-202ENST00000359366 CAVIN1Q6NZI2 390 aaKnown RBP5.99□□□□□ -1.45
ATXN3-202ENST00000359366 RALYLQ86SE5 291 aaKnown RBP5.99□□□□□ -1.45
ATXN3-202ENST00000359366 MB21D2Q8IYB1 491 aaPredicted RBP5.99□□□□□ -1.45
ATXN3-202ENST00000359366 GPT2Q8TD30 523 aa5.99□□□□□ -1.45
ATXN3-202ENST00000359366 MXD3Q9BW11 206 aa5.99□□□□□ -1.45
ATXN3-202ENST00000359366 ANKRD2Q9GZV1 360 aa5.99□□□□□ -1.45
ATXN3-202ENST00000359366 CTNNA3Q9UI47 895 aa5.99□□□□□ -1.45
ATXN3-202ENST00000359366 MTMR6Q9Y217 621 aa5.99□□□□□ -1.45
ATXN3-202ENST00000359366 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.99□□□□□ -1.45
ATXN3-202ENST00000359366 CACNA1SQ13698 1873 aa5.98□□□□□ -1.45
ATXN3-202ENST00000359366 KLF18A0A0U1RQI7 1052 aa5.98□□□□□ -1.45
ATXN3-202ENST00000359366 GOLGA8BA8MQT2 603 aa5.98□□□□□ -1.45
ATXN3-202ENST00000359366 PATL2C9JE40 543 aaKnown RBP5.98□□□□□ -1.45
ATXN3-202ENST00000359366 CYP2D6P10635 497 aa5.98□□□□□ -1.45
ATXN3-202ENST00000359366 PDIA3P30101 505 aaKnown RBP5.98□□□□□ -1.45
ATXN3-202ENST00000359366 CHRNA5P30532 468 aa5.98□□□□□ -1.45
ATXN3-202ENST00000359366 CLCN1P35523 988 aa5.98□□□□□ -1.45
ATXN3-202ENST00000359366 ANKRD1Q15327 319 aa5.98□□□□□ -1.45
ATXN3-202ENST00000359366 CRY2Q49AN0 593 aa5.98□□□□□ -1.45
ATXN3-202ENST00000359366 ZNF622Q969S3 477 aaKnown RBP eCLIP5.98□□□□□ -1.45
ATXN3-202ENST00000359366 RNF25Q96BH1 459 aaPredicted RBP5.98□□□□□ -1.45
ATXN3-202ENST00000359366 NSUN4Q96CB9 384 aaKnown RBP5.98□□□□□ -1.45
ATXN3-202ENST00000359366 ANKRD31Q8N7Z5 1873 aa5.98□□□□□ -1.45
ATXN3-202ENST00000359366 WDR33Q9C0J8 1336 aaKnown RBP5.98□□□□□ -1.45
ATXN3-202ENST00000359366 IRS2Q9Y4H2 1338 aa5.98□□□□□ -1.45
ATXN3-202ENST00000359366 F8W031 263 aaPredicted RBP5.98□□□□□ -1.45
ATXN3-202ENST00000359366 GOLGA6L22H0YM25 854 aa5.98□□□□□ -1.45
ATXN3-202ENST00000359366 PLSCR1O15162 318 aa5.98□□□□□ -1.45
ATXN3-202ENST00000359366 F13A1P00488 732 aa5.98□□□□□ -1.45
ATXN3-202ENST00000359366 GRIPAP1Q4V328 841 aa5.98□□□□□ -1.45
ATXN3-202ENST00000359366 USP48Q86UV5 1035 aa5.98□□□□□ -1.45
ATXN3-202ENST00000359366 GAS2L3Q86XJ1 694 aa5.98□□□□□ -1.45
ATXN3-202ENST00000359366 CMTR1Q8N1G2 835 aaKnown RBP5.98□□□□□ -1.45
ATXN3-202ENST00000359366 NCOA7Q8NI08 942 aa5.98□□□□□ -1.45
ATXN3-202ENST00000359366 RBM17Q96I25 401 aaKnown RBP5.98□□□□□ -1.45
ATXN3-202ENST00000359366 RIOK1Q9BRS2 568 aaKnown RBP5.98□□□□□ -1.45
ATXN3-202ENST00000359366 IRX2Q9BZI1 471 aaPredicted RBP5.98□□□□□ -1.45
ATXN3-202ENST00000359366 TFIP11Q9UBB9 837 aaKnown RBP5.98□□□□□ -1.45
ATXN3-202ENST00000359366 CHD4Q14839 1912 aa5.98□□□□□ -1.45
ATXN3-202ENST00000359366 MYH2Q9UKX2 1941 aa5.98□□□□□ -1.45
ATXN3-202ENST00000359366 XDHP47989 1333 aa5.97□□□□□ -1.45
ATXN3-202ENST00000359366 PTPDC1A2A3K4 754 aa5.97□□□□□ -1.45
ATXN3-202ENST00000359366 MCM5P33992 734 aa5.97□□□□□ -1.45
ATXN3-202ENST00000359366 MMP14P50281 582 aa5.97□□□□□ -1.45
ATXN3-202ENST00000359366 CEBPZQ03701 1054 aaKnown RBP5.97□□□□□ -1.45
ATXN3-202ENST00000359366 DOK7Q18PE1 504 aa5.97□□□□□ -1.45
ATXN3-202ENST00000359366 MICU3Q86XE3 530 aa5.97□□□□□ -1.45
ATXN3-202ENST00000359366 DZIP1Q86YF9 867 aaKnown RBP5.97□□□□□ -1.45
ATXN3-202ENST00000359366 CNPY4Q8N129 248 aa5.97□□□□□ -1.45
ATXN3-202ENST00000359366 CCDC82Q8N4S0 544 aa5.97□□□□□ -1.45
ATXN3-202ENST00000359366 NSUN7Q8NE18 718 aaKnown RBP5.97□□□□□ -1.45
ATXN3-202ENST00000359366 AIFM3Q96NN9 605 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms