RNA–Protein interactions for RNA: ENST00000358771.4

SIRPA-202, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-202ENST00000358771 CASP7P55210 303 aa16.33■□□□□ 0.2
SIRPA-202ENST00000358771 PNOCQ13519 176 aa16.33■□□□□ 0.2
SIRPA-202ENST00000358771 RCOR1Q9UKL0 485 aa16.33■□□□□ 0.2
SIRPA-202ENST00000358771 SOS2Q07890 1332 aaPredicted RBP16.32■□□□□ 0.2
SIRPA-202ENST00000358771 ERVV-1B6SEH8 477 aa16.32■□□□□ 0.2
SIRPA-202ENST00000358771 PDCL2Q8N4E4 241 aa16.32■□□□□ 0.2
SIRPA-202ENST00000358771 CNBD1Q8NA66 436 aa16.32■□□□□ 0.2
SIRPA-202ENST00000358771 TSGA10IPQ3SY00 556 aa16.32■□□□□ 0.2
SIRPA-202ENST00000358771 SPTY2D1Q68D10 685 aaPredicted RBP16.32■□□□□ 0.2
SIRPA-202ENST00000358771 MAP7D2Q96T17 732 aa16.32■□□□□ 0.2
SIRPA-202ENST00000358771 DEXIO95424 95 aa16.32■□□□□ 0.2
SIRPA-202ENST00000358771 ZNF827Q17R98 1081 aa16.32■□□□□ 0.2
SIRPA-202ENST00000358771 KIF18AQ8NI77 898 aa16.32■□□□□ 0.2
SIRPA-202ENST00000358771 ZMYM6O95789 1325 aa16.32■□□□□ 0.2
SIRPA-202ENST00000358771 URI1O94763 535 aaPredicted RBP16.31■□□□□ 0.2
SIRPA-202ENST00000358771 KIAA1468Q9P260 1216 aa16.31■□□□□ 0.2
SIRPA-202ENST00000358771 SEC63Q9UGP8 760 aaKnown RBP16.31■□□□□ 0.2
SIRPA-202ENST00000358771 KNDC1Q76NI1 1749 aa16.31■□□□□ 0.2
SIRPA-202ENST00000358771 YEATS4O95619 227 aa16.31■□□□□ 0.2
SIRPA-202ENST00000358771 CEP135Q66GS9 1140 aa16.31■□□□□ 0.2
SIRPA-202ENST00000358771 FANCBQ8NB91 859 aa16.31■□□□□ 0.2
SIRPA-202ENST00000358771 PALLDQ8WX93 1383 aa16.31■□□□□ 0.2
SIRPA-202ENST00000358771 CBX1P83916 185 aa16.31■□□□□ 0.2
SIRPA-202ENST00000358771 NR5A1Q13285 461 aa16.31■□□□□ 0.2
SIRPA-202ENST00000358771 PRDM10Q9NQV6 1147 aa16.31■□□□□ 0.2
SIRPA-202ENST00000358771 USP21Q9UK80 565 aa16.31■□□□□ 0.2
SIRPA-202ENST00000358771 LDHCP07864 332 aa16.3■□□□□ 0.2
SIRPA-202ENST00000358771 UBA7P41226 1012 aa16.3■□□□□ 0.2
SIRPA-202ENST00000358771 GSDMDP57764 484 aa16.3■□□□□ 0.2
SIRPA-202ENST00000358771 LINC00301Q8NCQ3 95 aa16.3■□□□□ 0.2
SIRPA-202ENST00000358771 ZNF500O60304 480 aaPredicted RBP16.3■□□□□ 0.2
SIRPA-202ENST00000358771 KIF23Q02241 960 aaPredicted RBP16.3■□□□□ 0.2
SIRPA-202ENST00000358771 DPCR1Q3MIW9 517 aa16.3■□□□□ 0.2
SIRPA-202ENST00000358771 PIK3AP1Q6ZUJ8 805 aa16.3■□□□□ 0.2
SIRPA-202ENST00000358771 TRMT44Q8IYL2 757 aaKnown RBP16.3■□□□□ 0.2
SIRPA-202ENST00000358771 PDLIM2Q96JY6 352 aa16.3■□□□□ 0.2
SIRPA-202ENST00000358771 KRT2P35908 639 aa16.3■□□□□ 0.2
SIRPA-202ENST00000358771 EXOSC10Q01780 885 aaKnown RBP16.3■□□□□ 0.2
SIRPA-202ENST00000358771 MAPKAPK5Q8IW41 473 aa16.3■□□□□ 0.2
SIRPA-202ENST00000358771 MAGEC2Q9UBF1 373 aaPredicted RBP16.3■□□□□ 0.2
SIRPA-202ENST00000358771 MAPK8IP1Q9UQF2 711 aa16.3■□□□□ 0.2
SIRPA-202ENST00000358771 NEDD4P46934 1319 aa16.3■□□□□ 0.2
SIRPA-202ENST00000358771 SPDYE4A6NLX3 237 aa16.29■□□□□ 0.2
SIRPA-202ENST00000358771 UFL1O94874 794 aa16.29■□□□□ 0.2
SIRPA-202ENST00000358771 EIF6P56537 245 aaKnown RBP16.29■□□□□ 0.2
SIRPA-202ENST00000358771 CCDC96Q2M329 555 aa16.29■□□□□ 0.2
SIRPA-202ENST00000358771 ZNF622Q969S3 477 aaKnown RBP eCLIP16.29■□□□□ 0.2
SIRPA-202ENST00000358771 SH2B2O14492 632 aaPredicted RBP16.29■□□□□ 0.2
SIRPA-202ENST00000358771 SNW1Q13573 536 aaKnown RBP16.29■□□□□ 0.2
SIRPA-202ENST00000358771 RILPL1Q5EBL4 403 aa16.29■□□□□ 0.2
SIRPA-202ENST00000358771 GPR101Q96P66 508 aaPredicted RBP16.29■□□□□ 0.2
SIRPA-202ENST00000358771 ZNF287Q9HBT7 754 aa16.29■□□□□ 0.2
SIRPA-202ENST00000358771 SENP2Q9HC62 589 aa16.29■□□□□ 0.2
SIRPA-202ENST00000358771 OVOS2A0A0G2JMS6 1433 aa16.29■□□□□ 0.2
SIRPA-202ENST00000358771 NKX1-1Q15270 411 aaPredicted RBP16.29■□□□□ 0.2
SIRPA-202ENST00000358771 MB21D2Q8IYB1 491 aaPredicted RBP16.29■□□□□ 0.2
SIRPA-202ENST00000358771 CRACR2BQ8N4Y2 399 aaPredicted RBP16.29■□□□□ 0.2
SIRPA-202ENST00000358771 CELF1Q92879 486 aaKnown RBP16.29■□□□□ 0.2
SIRPA-202ENST00000358771 PRIMPOLQ96LW4 560 aa16.29■□□□□ 0.2
SIRPA-202ENST00000358771 ANKRD2Q9GZV1 360 aa16.29■□□□□ 0.2
SIRPA-202ENST00000358771 DNAJC5Q9H3Z4 198 aa16.29■□□□□ 0.2
SIRPA-202ENST00000358771 GOLPH3LQ9H4A5 285 aa16.29■□□□□ 0.2
SIRPA-202ENST00000358771 RTEL1Q9NZ71 1219 aa16.29■□□□□ 0.2
SIRPA-202ENST00000358771 DYNC1I1O14576 645 aa16.28■□□□□ 0.2
SIRPA-202ENST00000358771 CSF1RP07333 972 aa16.28■□□□□ 0.2
SIRPA-202ENST00000358771 MTERF4Q7Z6M4 381 aaKnown RBP16.28■□□□□ 0.2
SIRPA-202ENST00000358771 CTDNEP1O95476 244 aa16.28■□□□□ 0.2
SIRPA-202ENST00000358771 CDC27P30260 824 aa16.28■□□□□ 0.2
SIRPA-202ENST00000358771 NOSTRINQ8IVI9 506 aa16.28■□□□□ 0.2
SIRPA-202ENST00000358771 XPO4Q9C0E2 1151 aaKnown RBP16.28■□□□□ 0.2
SIRPA-202ENST00000358771 TFAP4Q01664 338 aa16.28■□□□□ 0.2
SIRPA-202ENST00000358771 TGFBRAP1Q8WUH2 860 aa16.28■□□□□ 0.2
SIRPA-202ENST00000358771 PPP1R1BQ9UD71 204 aaPredicted RBP16.28■□□□□ 0.2
SIRPA-202ENST00000358771 RTL9Q8NET4 1388 aa16.28■□□□□ 0.2
SIRPA-202ENST00000358771 ST5P78524 1137 aa16.28■□□□□ 0.2
SIRPA-202ENST00000358771 SMARCC2Q8TAQ2 1214 aa16.28■□□□□ 0.2
SIRPA-202ENST00000358771 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.28■□□□□ 0.2
SIRPA-202ENST00000358771 NEMFO60524 1076 aa16.27■□□□□ 0.2
SIRPA-202ENST00000358771 MYL5Q02045 173 aa16.27■□□□□ 0.2
SIRPA-202ENST00000358771 STIM1Q13586 685 aa16.27■□□□□ 0.2
SIRPA-202ENST00000358771 CPDO75976 1380 aa16.27■□□□□ 0.2
SIRPA-202ENST00000358771 NAP1L1P55209 391 aaKnown RBP16.27■□□□□ 0.19
SIRPA-202ENST00000358771 RRAGBQ5VZM2 374 aa16.27■□□□□ 0.19
SIRPA-202ENST00000358771 MARCH10Q8NA82 808 aaPredicted RBP16.27■□□□□ 0.19
SIRPA-202ENST00000358771 ZNF804AQ7Z570 1209 aa16.27■□□□□ 0.19
SIRPA-202ENST00000358771 ZBTB9Q96C00 473 aa16.27■□□□□ 0.19
SIRPA-202ENST00000358771 ZSWIM4Q9H7M6 989 aa16.27■□□□□ 0.19
SIRPA-202ENST00000358771 UBN2Q6ZU65 1347 aa16.26■□□□□ 0.19
SIRPA-202ENST00000358771 KRT18P05783 430 aaKnown RBP16.26■□□□□ 0.19
SIRPA-202ENST00000358771 IDEP14735 1019 aa16.26■□□□□ 0.19
SIRPA-202ENST00000358771 FANCCQ00597 558 aa16.26■□□□□ 0.19
SIRPA-202ENST00000358771 ARID5BQ14865 1188 aa16.26■□□□□ 0.19
SIRPA-202ENST00000358771 SERTAD1Q9UHV2 236 aa16.26■□□□□ 0.19
SIRPA-202ENST00000358771 DNAI1Q9UI46 699 aa16.26■□□□□ 0.19
SIRPA-202ENST00000358771 CDHR2Q9BYE9 1310 aa16.26■□□□□ 0.19
SIRPA-202ENST00000358771 NFAT5O94916 1531 aa16.26■□□□□ 0.19
SIRPA-202ENST00000358771 RIOK3O14730 519 aaKnown RBP16.26■□□□□ 0.19
SIRPA-202ENST00000358771 EIF5P55010 431 aaKnown RBP16.26■□□□□ 0.19
SIRPA-202ENST00000358771 ITPK1Q13572 414 aa16.26■□□□□ 0.19
SIRPA-202ENST00000358771 AEBP2Q6ZN18 517 aaPredicted RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms