RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 MTF1Q14872 753 aa7.5□□□□□ -1.21
CSDE1-203ENST00000358528 SPECC1LQ69YQ0 1117 aa7.5□□□□□ -1.21
CSDE1-203ENST00000358528 WASF1Q92558 559 aa7.5□□□□□ -1.21
CSDE1-203ENST00000358528 EEF2KMTQ96G04 330 aa7.5□□□□□ -1.21
CSDE1-203ENST00000358528 GUCA1BQ9UMX6 200 aa7.5□□□□□ -1.21
CSDE1-203ENST00000358528 MROH7-TTC4A0A0A0MT08 1334 aa7.5□□□□□ -1.21
CSDE1-203ENST00000358528 AKR1B15C9JRZ8 316 aaPredicted RBP7.5□□□□□ -1.21
CSDE1-203ENST00000358528 RFX5P48382 616 aaPredicted RBP7.5□□□□□ -1.21
CSDE1-203ENST00000358528 NR5A1Q13285 461 aa7.5□□□□□ -1.21
CSDE1-203ENST00000358528 ZNF174Q15697 407 aa7.5□□□□□ -1.21
CSDE1-203ENST00000358528 FKBP15Q5T1M5 1219 aa7.5□□□□□ -1.21
CSDE1-203ENST00000358528 RRAGBQ5VZM2 374 aa7.5□□□□□ -1.21
CSDE1-203ENST00000358528 WWC2Q6AWC2 1192 aa7.5□□□□□ -1.21
CSDE1-203ENST00000358528 TXLNBQ8N3L3 684 aa7.5□□□□□ -1.21
CSDE1-203ENST00000358528 PLIN2Q99541 437 aa7.5□□□□□ -1.21
CSDE1-203ENST00000358528 SENP2Q9HC62 589 aa7.5□□□□□ -1.21
CSDE1-203ENST00000358528 BRMS1Q9HCU9 246 aa7.5□□□□□ -1.21
CSDE1-203ENST00000358528 RSPH14Q9UHP6 348 aa7.5□□□□□ -1.21
CSDE1-203ENST00000358528 GOLGA6L9A6NEM1 432 aa7.49□□□□□ -1.21
CSDE1-203ENST00000358528 SOWAHDA6NJG2 315 aa7.49□□□□□ -1.21
CSDE1-203ENST00000358528 MAP3K12Q12852 859 aa7.49□□□□□ -1.21
CSDE1-203ENST00000358528 KIAA1328Q86T90 577 aa7.49□□□□□ -1.21
CSDE1-203ENST00000358528 SLC4A4Q9Y6R1 1079 aa7.49□□□□□ -1.21
CSDE1-203ENST00000358528 EFCAB8A8MWE9 144 aa7.49□□□□□ -1.21
CSDE1-203ENST00000358528 CUTAO60888 179 aa7.49□□□□□ -1.21
CSDE1-203ENST00000358528 PRDM1O75626 825 aa7.49□□□□□ -1.21
CSDE1-203ENST00000358528 MATR3P43243 847 aaKnown RBP eCLIP7.49□□□□□ -1.21
CSDE1-203ENST00000358528 ST5P78524 1137 aa7.49□□□□□ -1.21
CSDE1-203ENST00000358528 APOA5Q6Q788 366 aa7.49□□□□□ -1.21
CSDE1-203ENST00000358528 SHC4Q6S5L8 630 aa7.49□□□□□ -1.21
CSDE1-203ENST00000358528 ATG9AQ7Z3C6 839 aa7.49□□□□□ -1.21
CSDE1-203ENST00000358528 NUTM2AQ8IVF1 878 aaPredicted RBP7.49□□□□□ -1.21
CSDE1-203ENST00000358528 PARD6BQ9BYG5 372 aa7.49□□□□□ -1.21
CSDE1-203ENST00000358528 BLZF1Q9H2G9 400 aa7.49□□□□□ -1.21
CSDE1-203ENST00000358528 ACBD3Q9H3P7 528 aa7.49□□□□□ -1.21
CSDE1-203ENST00000358528 ZNF446Q9NWS9 450 aa7.49□□□□□ -1.21
CSDE1-203ENST00000358528 TECPR2O15040 1411 aa7.49□□□□□ -1.21
CSDE1-203ENST00000358528 VWA3AA6NCI4 1184 aa7.49□□□□□ -1.21
CSDE1-203ENST00000358528 ANKRD65E5RJM6 399 aa7.49□□□□□ -1.21
CSDE1-203ENST00000358528 PRR29P0C7W0 189 aa7.49□□□□□ -1.21
CSDE1-203ENST00000358528 ITGA6P23229 1130 aa7.49□□□□□ -1.21
CSDE1-203ENST00000358528 CDC27P30260 824 aa7.49□□□□□ -1.21
CSDE1-203ENST00000358528 EIF5P55010 431 aaKnown RBP7.49□□□□□ -1.21
CSDE1-203ENST00000358528 ZSCAN26Q16670 478 aa7.49□□□□□ -1.21
CSDE1-203ENST00000358528 CYB5R4Q7L1T6 521 aa7.49□□□□□ -1.21
CSDE1-203ENST00000358528 VSTM4Q8IW00 320 aa7.49□□□□□ -1.21
CSDE1-203ENST00000358528 DRC1Q96MC2 740 aa7.49□□□□□ -1.21
CSDE1-203ENST00000358528 TMOD3Q9NYL9 352 aa7.49□□□□□ -1.21
CSDE1-203ENST00000358528 CTAGE9A4FU28 777 aa7.48□□□□□ -1.21
CSDE1-203ENST00000358528 CYP27B1O15528 508 aa7.48□□□□□ -1.21
CSDE1-203ENST00000358528 PPARDQ03181 441 aa7.48□□□□□ -1.21
CSDE1-203ENST00000358528 PDE11AQ9HCR9 933 aa7.48□□□□□ -1.21
CSDE1-203ENST00000358528 VPS54Q9P1Q0 977 aa7.48□□□□□ -1.21
CSDE1-203ENST00000358528 CEP131Q9UPN4 1083 aa7.48□□□□□ -1.21
CSDE1-203ENST00000358528 CTNND2Q9UQB3 1225 aa7.48□□□□□ -1.21
CSDE1-203ENST00000358528 ERBB3P21860 1342 aa7.48□□□□□ -1.21
CSDE1-203ENST00000358528 CTAGE15A4D2H0 777 aa7.48□□□□□ -1.21
CSDE1-203ENST00000358528 CTAGE8P0CG41 777 aa7.48□□□□□ -1.21
CSDE1-203ENST00000358528 PDE4BQ07343 736 aa7.48□□□□□ -1.21
CSDE1-203ENST00000358528 CTAGE6Q86UF2 777 aa7.48□□□□□ -1.21
CSDE1-203ENST00000358528 CTAGE4Q8IX94 777 aa7.48□□□□□ -1.21
CSDE1-203ENST00000358528 ZCRB1Q8TBF4 217 aaKnown RBP7.48□□□□□ -1.21
CSDE1-203ENST00000358528 SLF1Q9BQI6 1058 aa7.48□□□□□ -1.21
CSDE1-203ENST00000358528 PLEKHA4Q9H4M7 779 aa7.48□□□□□ -1.21
CSDE1-203ENST00000358528 C3P01024 1663 aa7.48□□□□□ -1.21
CSDE1-203ENST00000358528 PXDNQ92626 1479 aa7.48□□□□□ -1.21
CSDE1-203ENST00000358528 IKBKBO14920 756 aa7.48□□□□□ -1.21
CSDE1-203ENST00000358528 FOXO4P98177 505 aa7.48□□□□□ -1.21
CSDE1-203ENST00000358528 TBC1D10CQ8IV04 446 aa7.48□□□□□ -1.21
CSDE1-203ENST00000358528 NOSTRINQ8IVI9 506 aa7.48□□□□□ -1.21
CSDE1-203ENST00000358528 TAB2Q9NYJ8 693 aa7.48□□□□□ -1.21
CSDE1-203ENST00000358528 MAN1B1Q9UKM7 699 aa7.48□□□□□ -1.21
CSDE1-203ENST00000358528 ZMYM6O95789 1325 aa7.48□□□□□ -1.21
CSDE1-203ENST00000358528 TRIM75PA6NK02 468 aa7.47□□□□□ -1.21
CSDE1-203ENST00000358528 TUBB4AP04350 444 aa7.47□□□□□ -1.21
CSDE1-203ENST00000358528 PHKA1P46020 1223 aa7.47□□□□□ -1.21
CSDE1-203ENST00000358528 IRX5P78411 483 aaPredicted RBP7.47□□□□□ -1.21
CSDE1-203ENST00000358528 GRIN1Q05586 938 aa7.47□□□□□ -1.21
CSDE1-203ENST00000358528 METTL16Q86W50 562 aaKnown RBP7.47□□□□□ -1.21
CSDE1-203ENST00000358528 GPR161Q8N6U8 529 aaKnown RBP7.47□□□□□ -1.21
CSDE1-203ENST00000358528 MAGEC2Q9UBF1 373 aaPredicted RBP7.47□□□□□ -1.21
CSDE1-203ENST00000358528 WWC3Q9ULE0 1092 aa7.47□□□□□ -1.21
CSDE1-203ENST00000358528 PCDHB6Q9Y5E3 794 aa7.47□□□□□ -1.21
CSDE1-203ENST00000358528 PHLPP2Q6ZVD8 1323 aa7.47□□□□□ -1.21
CSDE1-203ENST00000358528 NBPF26B4DH59 902 aa7.47□□□□□ -1.21
CSDE1-203ENST00000358528 TEX33O43247 280 aa7.47□□□□□ -1.21
CSDE1-203ENST00000358528 ERCC3P19447 782 aa7.47□□□□□ -1.21
CSDE1-203ENST00000358528 PLA2G4AP47712 749 aa7.47□□□□□ -1.21
CSDE1-203ENST00000358528 ANTXR2P58335 489 aa7.47□□□□□ -1.21
CSDE1-203ENST00000358528 TTF1Q15361 905 aaPredicted RBP7.47□□□□□ -1.21
CSDE1-203ENST00000358528 LONRF2Q1L5Z9 754 aa7.47□□□□□ -1.21
CSDE1-203ENST00000358528 NOM1Q5C9Z4 860 aaKnown RBP7.47□□□□□ -1.21
CSDE1-203ENST00000358528 NBPF14Q5TI25 921 aa7.47□□□□□ -1.21
CSDE1-203ENST00000358528 NBPF10Q6P3W6 841 aaKnown RBP7.47□□□□□ -1.21
CSDE1-203ENST00000358528 MB21D2Q8IYB1 491 aaPredicted RBP7.47□□□□□ -1.21
CSDE1-203ENST00000358528 KLHL34Q8N239 644 aa7.47□□□□□ -1.21
CSDE1-203ENST00000358528 NBPF15Q8N660 670 aa7.47□□□□□ -1.21
CSDE1-203ENST00000358528 ACRBPQ8NEB7 543 aa7.47□□□□□ -1.21
CSDE1-203ENST00000358528 CDC5LQ99459 802 aaKnown RBP7.47□□□□□ -1.21
CSDE1-203ENST00000358528 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms