RNA–Protein interactions for RNA: ENST00000358392.6

COL11A1-202, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-202ENST00000358392 CABS1Q96KC9 395 aa12.47□□□□□ -0.41
COL11A1-202ENST00000358392 RBSNQ9H1K0 784 aa12.47□□□□□ -0.41
COL11A1-202ENST00000358392 PCDHB15Q9Y5E8 787 aa12.47□□□□□ -0.41
COL11A1-202ENST00000358392 ARHGAP42A6NI28 874 aa12.47□□□□□ -0.41
COL11A1-202ENST00000358392 MX2P20592 715 aa12.47□□□□□ -0.41
COL11A1-202ENST00000358392 COG7P83436 770 aa12.47□□□□□ -0.41
COL11A1-202ENST00000358392 LMBR1LQ6UX01 489 aa12.47□□□□□ -0.41
COL11A1-202ENST00000358392 MRPL46Q9H2W6 279 aaKnown RBP12.47□□□□□ -0.41
COL11A1-202ENST00000358392 ELP1O95163 1332 aa12.47□□□□□ -0.41
COL11A1-202ENST00000358392 PHLDB2Q86SQ0 1253 aa12.47□□□□□ -0.41
COL11A1-202ENST00000358392 SMAP1Q8IYB5 467 aaPredicted RBP12.47□□□□□ -0.41
COL11A1-202ENST00000358392 SYNJ2O15056 1496 aa12.47□□□□□ -0.41
COL11A1-202ENST00000358392 DHX29Q7Z478 1369 aaKnown RBP12.47□□□□□ -0.41
COL11A1-202ENST00000358392 SYNRGQ9UMZ2 1314 aa12.46□□□□□ -0.41
COL11A1-202ENST00000358392 GIGYF1O75420 1035 aaPredicted RBP12.46□□□□□ -0.41
COL11A1-202ENST00000358392 TUBB4BP68371 445 aa12.46□□□□□ -0.41
COL11A1-202ENST00000358392 COPS6Q7L5N1 327 aa12.46□□□□□ -0.41
COL11A1-202ENST00000358392 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.46□□□□□ -0.41
COL11A1-202ENST00000358392 POLR2DO15514 142 aaKnown RBP12.46□□□□□ -0.41
COL11A1-202ENST00000358392 SNRPA1P09661 255 aaKnown RBP12.46□□□□□ -0.41
COL11A1-202ENST00000358392 XAB2Q9HCS7 855 aaKnown RBP12.46□□□□□ -0.41
COL11A1-202ENST00000358392 PPP1R12AO14974 1030 aaPredicted RBP12.46□□□□□ -0.41
COL11A1-202ENST00000358392 STK10O94804 968 aaKnown RBP12.46□□□□□ -0.41
COL11A1-202ENST00000358392 CAPN12Q6ZSI9 719 aa12.46□□□□□ -0.41
COL11A1-202ENST00000358392 ZNF804AQ7Z570 1209 aa12.46□□□□□ -0.41
COL11A1-202ENST00000358392 OGFOD1Q8N543 542 aa12.46□□□□□ -0.41
COL11A1-202ENST00000358392 SLC52A1Q9NWF4 448 aa12.46□□□□□ -0.41
COL11A1-202ENST00000358392 TUBB4AP04350 444 aa12.46□□□□□ -0.41
COL11A1-202ENST00000358392 PEX19P40855 299 aa12.46□□□□□ -0.41
COL11A1-202ENST00000358392 TRPC3Q13507 836 aa12.46□□□□□ -0.41
COL11A1-202ENST00000358392 PIK3AP1Q6ZUJ8 805 aa12.46□□□□□ -0.41
COL11A1-202ENST00000358392 FCHSD1Q86WN1 690 aa12.46□□□□□ -0.41
COL11A1-202ENST00000358392 IQUBQ8NA54 791 aa12.46□□□□□ -0.41
COL11A1-202ENST00000358392 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.46□□□□□ -0.41
COL11A1-202ENST00000358392 SECISBP2LQ93073 1101 aaKnown RBP12.46□□□□□ -0.41
COL11A1-202ENST00000358392 VPS37BQ9H9H4 285 aa12.46□□□□□ -0.41
COL11A1-202ENST00000358392 SPECC1L-ADORA2AF8WAN1 911 aa12.46□□□□□ -0.42
COL11A1-202ENST00000358392 RPL13P26373 211 aaKnown RBP12.46□□□□□ -0.42
COL11A1-202ENST00000358392 IFNL2Q8IZJ0 200 aa12.46□□□□□ -0.42
COL11A1-202ENST00000358392 TFCP2Q12800 502 aa12.46□□□□□ -0.42
COL11A1-202ENST00000358392 MICAL1Q8TDZ2 1067 aa12.46□□□□□ -0.42
COL11A1-202ENST00000358392 IL1RL1Q01638 556 aa12.45□□□□□ -0.42
COL11A1-202ENST00000358392 CCDC105Q8IYK2 499 aa12.45□□□□□ -0.42
COL11A1-202ENST00000358392 BANK1Q8NDB2 785 aa12.45□□□□□ -0.42
COL11A1-202ENST00000358392 NOX5Q96PH1 765 aa12.45□□□□□ -0.42
COL11A1-202ENST00000358392 IGF1RP08069 1367 aa12.45□□□□□ -0.42
COL11A1-202ENST00000358392 PARP1P09874 1014 aaKnown RBP12.45□□□□□ -0.42
COL11A1-202ENST00000358392 GCKP35557 465 aa12.45□□□□□ -0.42
COL11A1-202ENST00000358392 LIN9Q5TKA1 542 aa12.45□□□□□ -0.42
COL11A1-202ENST00000358392 TTC19Q6DKK2 380 aaPredicted RBP12.45□□□□□ -0.42
COL11A1-202ENST00000358392 FNBP4Q8N3X1 1017 aaPredicted RBP12.45□□□□□ -0.42
COL11A1-202ENST00000358392 SUDS3Q9H7L9 328 aaPredicted RBP12.45□□□□□ -0.42
COL11A1-202ENST00000358392 WDR46O15213 610 aaKnown RBP12.45□□□□□ -0.42
COL11A1-202ENST00000358392 NIP7Q9Y221 180 aaKnown RBP eCLIP12.45□□□□□ -0.42
COL11A1-202ENST00000358392 DENND2CQ68D51 928 aa12.45□□□□□ -0.42
COL11A1-202ENST00000358392 HINFPQ9BQA5 517 aa12.45□□□□□ -0.42
COL11A1-202ENST00000358392 RIPOR2Q9Y4F9 1068 aa12.45□□□□□ -0.42
COL11A1-202ENST00000358392 GRM8O00222 908 aa12.45□□□□□ -0.42
COL11A1-202ENST00000358392 CALUO43852 315 aaPredicted RBP12.45□□□□□ -0.42
COL11A1-202ENST00000358392 NACA2Q9H009 215 aa12.45□□□□□ -0.42
COL11A1-202ENST00000358392 CTTNBP2NLQ9P2B4 639 aa12.45□□□□□ -0.42
COL11A1-202ENST00000358392 POLKQ9UBT6 870 aa12.45□□□□□ -0.42
COL11A1-202ENST00000358392 RNF113AO15541 343 aaKnown RBP12.44□□□□□ -0.42
COL11A1-202ENST00000358392 ZYXQ15942 572 aaKnown RBP12.44□□□□□ -0.42
COL11A1-202ENST00000358392 TNNQ9UQP3 1299 aa12.44□□□□□ -0.42
COL11A1-202ENST00000358392 KRT19P08727 400 aa12.44□□□□□ -0.42
COL11A1-202ENST00000358392 NCAPH2Q6IBW4 605 aa12.44□□□□□ -0.42
COL11A1-202ENST00000358392 DYMQ7RTS9 669 aa12.44□□□□□ -0.42
COL11A1-202ENST00000358392 CCDC89Q8N998 374 aa12.44□□□□□ -0.42
COL11A1-202ENST00000358392 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.44□□□□□ -0.42
COL11A1-202ENST00000358392 CAPN7Q9Y6W3 813 aa12.44□□□□□ -0.42
COL11A1-202ENST00000358392 EHBP1L1Q8N3D4 1523 aa12.44□□□□□ -0.42
COL11A1-202ENST00000358392 LRMPQ12912 555 aa12.44□□□□□ -0.42
COL11A1-202ENST00000358392 BIRC2Q13490 618 aa12.44□□□□□ -0.42
COL11A1-202ENST00000358392 TAB2Q9NYJ8 693 aa12.44□□□□□ -0.42
COL11A1-202ENST00000358392 MGEA5O60502 916 aa12.44□□□□□ -0.42
COL11A1-202ENST00000358392 GNA11P29992 359 aa12.44□□□□□ -0.42
COL11A1-202ENST00000358392 TXKP42681 527 aa12.44□□□□□ -0.42
COL11A1-202ENST00000358392 SND1Q7KZF4 910 aaKnown RBP eCLIP12.44□□□□□ -0.42
COL11A1-202ENST00000358392 CSGALNACT2Q8N6G5 542 aa12.44□□□□□ -0.42
COL11A1-202ENST00000358392 FAM135AQ9P2D6 1515 aa12.44□□□□□ -0.42
COL11A1-202ENST00000358392 SLC8A3P57103 927 aa12.44□□□□□ -0.42
COL11A1-202ENST00000358392 FANCCQ00597 558 aa12.44□□□□□ -0.42
COL11A1-202ENST00000358392 ARHGAP24Q8N264 748 aa12.44□□□□□ -0.42
COL11A1-202ENST00000358392 PDCD7Q8N8D1 485 aaKnown RBP12.44□□□□□ -0.42
COL11A1-202ENST00000358392 CACYBPQ9HB71 228 aaKnown RBP12.44□□□□□ -0.42
COL11A1-202ENST00000358392 PRG4Q92954 1404 aaPredicted RBP12.44□□□□□ -0.42
COL11A1-202ENST00000358392 TAB3Q8N5C8 712 aaPredicted RBP12.43□□□□□ -0.42
COL11A1-202ENST00000358392 EFCC1Q9HA90 598 aa12.43□□□□□ -0.42
COL11A1-202ENST00000358392 BIN2Q9UBW5 565 aaPredicted RBP12.43□□□□□ -0.42
COL11A1-202ENST00000358392 MTX1Q13505 466 aa12.43□□□□□ -0.42
COL11A1-202ENST00000358392 MYCLP12524 364 aaPredicted RBP12.43□□□□□ -0.42
COL11A1-202ENST00000358392 ATP1A2P50993 1020 aa12.43□□□□□ -0.42
COL11A1-202ENST00000358392 RPS6KA2Q15349 733 aa12.43□□□□□ -0.42
COL11A1-202ENST00000358392 DCUN1D2Q6PH85 259 aa12.43□□□□□ -0.42
COL11A1-202ENST00000358392 KRT28Q7Z3Y7 464 aa12.43□□□□□ -0.42
COL11A1-202ENST00000358392 BRAPQ7Z569 592 aa12.43□□□□□ -0.42
COL11A1-202ENST00000358392 PDZD8Q8NEN9 1154 aa12.43□□□□□ -0.42
COL11A1-202ENST00000358392 PHF8Q9UPP1 1060 aa12.43□□□□□ -0.42
COL11A1-202ENST00000358392 DAPK1P53355 1430 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms