RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 CARMIL3Q8ND23 1372 aa10.72□□□□□ -0.69
SMARCAL1-202ENST00000358207 CCDC69A6NI79 296 aa10.72□□□□□ -0.69
SMARCAL1-202ENST00000358207 RTN2O75298 545 aa10.72□□□□□ -0.69
SMARCAL1-202ENST00000358207 FAM163BP0C2L3 166 aa10.72□□□□□ -0.69
SMARCAL1-202ENST00000358207 CCDC158Q5M9N0 1113 aa10.72□□□□□ -0.69
SMARCAL1-202ENST00000358207 E4F1Q66K89 784 aaPredicted RBP10.72□□□□□ -0.69
SMARCAL1-202ENST00000358207 INTS3Q68E01 1043 aaKnown RBP10.72□□□□□ -0.69
SMARCAL1-202ENST00000358207 PLEKHM2Q8IWE5 1019 aa10.72□□□□□ -0.69
SMARCAL1-202ENST00000358207 A1CFQ9NQ94 594 aaKnown RBP10.72□□□□□ -0.69
SMARCAL1-202ENST00000358207 KCND1Q9NSA2 647 aa10.72□□□□□ -0.69
SMARCAL1-202ENST00000358207 DBF4Q9UBU7 674 aaPredicted RBP10.72□□□□□ -0.69
SMARCAL1-202ENST00000358207 ZNF646O15015 1829 aaPredicted RBP10.72□□□□□ -0.69
SMARCAL1-202ENST00000358207 WDR33Q9C0J8 1336 aaKnown RBP10.72□□□□□ -0.69
SMARCAL1-202ENST00000358207 COQ9O75208 318 aa10.72□□□□□ -0.69
SMARCAL1-202ENST00000358207 GCFC2P16383 781 aaKnown RBP10.72□□□□□ -0.69
SMARCAL1-202ENST00000358207 ANAPC15P60006 121 aa10.72□□□□□ -0.69
SMARCAL1-202ENST00000358207 CAMK4Q16566 473 aa10.72□□□□□ -0.69
SMARCAL1-202ENST00000358207 CEP85Q6P2H3 762 aa10.72□□□□□ -0.69
SMARCAL1-202ENST00000358207 INTS4Q96HW7 963 aaKnown RBP10.72□□□□□ -0.69
SMARCAL1-202ENST00000358207 CLIC6Q96NY7 704 aa10.72□□□□□ -0.69
SMARCAL1-202ENST00000358207 USP44Q9H0E7 712 aa10.72□□□□□ -0.69
SMARCAL1-202ENST00000358207 NUCKS1Q9H1E3 243 aaKnown RBP10.72□□□□□ -0.69
SMARCAL1-202ENST00000358207 VEZTQ9HBM0 779 aa10.72□□□□□ -0.69
SMARCAL1-202ENST00000358207 PDE11AQ9HCR9 933 aa10.72□□□□□ -0.69
SMARCAL1-202ENST00000358207 AP1G2O75843 785 aa10.71□□□□□ -0.69
SMARCAL1-202ENST00000358207 UBTFL1P0CB47 393 aaPredicted RBP10.71□□□□□ -0.69
SMARCAL1-202ENST00000358207 TDRD7Q8NHU6 1098 aaKnown RBP10.71□□□□□ -0.69
SMARCAL1-202ENST00000358207 CCDC26Q8TAB7 109 aa10.71□□□□□ -0.69
SMARCAL1-202ENST00000358207 KLHDC4Q8TBB5 520 aa10.71□□□□□ -0.69
SMARCAL1-202ENST00000358207 C9orf78Q9NZ63 289 aaPredicted RBP10.71□□□□□ -0.69
SMARCAL1-202ENST00000358207 TAOK2Q9UL54 1235 aa10.71□□□□□ -0.69
SMARCAL1-202ENST00000358207 MAP2K7O14733 419 aa10.71□□□□□ -0.69
SMARCAL1-202ENST00000358207 RFC4P35249 363 aa10.71□□□□□ -0.69
SMARCAL1-202ENST00000358207 NEDD9Q14511 834 aa10.71□□□□□ -0.69
SMARCAL1-202ENST00000358207 SKIDA1Q1XH10 827 aa10.71□□□□□ -0.69
SMARCAL1-202ENST00000358207 TTLL7Q6ZT98 887 aa10.71□□□□□ -0.69
SMARCAL1-202ENST00000358207 MYD88Q99836 296 aa10.71□□□□□ -0.69
SMARCAL1-202ENST00000358207 CARD6Q9BX69 1037 aa10.71□□□□□ -0.69
SMARCAL1-202ENST00000358207 FAN1Q9Y2M0 1017 aa10.71□□□□□ -0.69
SMARCAL1-202ENST00000358207 HSPA6P17066 643 aa10.71□□□□□ -0.7
SMARCAL1-202ENST00000358207 ERCC3P19447 782 aa10.71□□□□□ -0.7
SMARCAL1-202ENST00000358207 GCC1Q96CN9 775 aa10.71□□□□□ -0.7
SMARCAL1-202ENST00000358207 PPP1R13BQ96KQ4 1090 aa10.71□□□□□ -0.7
SMARCAL1-202ENST00000358207 FMNL2Q96PY5 1086 aa10.71□□□□□ -0.7
SMARCAL1-202ENST00000358207 TACO1Q9BSH4 297 aaKnown RBP10.71□□□□□ -0.7
SMARCAL1-202ENST00000358207 SIL1Q9H173 461 aa10.71□□□□□ -0.7
SMARCAL1-202ENST00000358207 ARFGAP3Q9NP61 516 aa10.71□□□□□ -0.7
SMARCAL1-202ENST00000358207 PPFIA4O75335 1185 aa10.7□□□□□ -0.7
SMARCAL1-202ENST00000358207 EVCP57679 992 aa10.7□□□□□ -0.7
SMARCAL1-202ENST00000358207 DHX8Q14562 1220 aaKnown RBP10.7□□□□□ -0.7
SMARCAL1-202ENST00000358207 MSL1Q68DK7 614 aa10.7□□□□□ -0.7
SMARCAL1-202ENST00000358207 CLEC4GQ6UXB4 293 aa10.7□□□□□ -0.7
SMARCAL1-202ENST00000358207 ERC1Q8IUD2 1116 aa10.7□□□□□ -0.7
SMARCAL1-202ENST00000358207 DNAJC10Q8IXB1 793 aa10.7□□□□□ -0.7
SMARCAL1-202ENST00000358207 CKAP2LQ8IYA6 745 aa10.7□□□□□ -0.7
SMARCAL1-202ENST00000358207 TRIM6Q9C030 488 aaPredicted RBP10.7□□□□□ -0.7
SMARCAL1-202ENST00000358207 CD248Q9HCU0 757 aa10.7□□□□□ -0.7
SMARCAL1-202ENST00000358207 PA2G4Q9UQ80 394 aaKnown RBP10.7□□□□□ -0.7
SMARCAL1-202ENST00000358207 GNAI3P08754 354 aa10.7□□□□□ -0.7
SMARCAL1-202ENST00000358207 CDC25BP30305 580 aa10.7□□□□□ -0.7
SMARCAL1-202ENST00000358207 APOBRQ0VD83 1088 aa10.7□□□□□ -0.7
SMARCAL1-202ENST00000358207 PDIA6Q15084 440 aa10.7□□□□□ -0.7
SMARCAL1-202ENST00000358207 TTC22Q5TAA0 569 aa10.7□□□□□ -0.7
SMARCAL1-202ENST00000358207 AP1ARQ63HQ0 302 aa10.7□□□□□ -0.7
SMARCAL1-202ENST00000358207 ISM2Q6H9L7 571 aa10.7□□□□□ -0.7
SMARCAL1-202ENST00000358207 ZKSCAN4Q969J2 545 aaPredicted RBP10.7□□□□□ -0.7
SMARCAL1-202ENST00000358207 BICC1Q9H694 974 aaKnown RBP10.7□□□□□ -0.7
SMARCAL1-202ENST00000358207 TRPM7Q96QT4 1865 aa10.69□□□□□ -0.7
SMARCAL1-202ENST00000358207 GNAI2P04899 355 aa10.69□□□□□ -0.7
SMARCAL1-202ENST00000358207 SNRPA1P09661 255 aaKnown RBP10.69□□□□□ -0.7
SMARCAL1-202ENST00000358207 CCT4P50991 539 aaKnown RBP10.69□□□□□ -0.7
SMARCAL1-202ENST00000358207 MTA1Q13330 715 aa10.69□□□□□ -0.7
SMARCAL1-202ENST00000358207 LONRF2Q1L5Z9 754 aa10.69□□□□□ -0.7
SMARCAL1-202ENST00000358207 STYK1Q6J9G0 422 aa10.69□□□□□ -0.7
SMARCAL1-202ENST00000358207 FMNL3Q8IVF7 1028 aa10.69□□□□□ -0.7
SMARCAL1-202ENST00000358207 PSMD1Q99460 953 aa10.69□□□□□ -0.7
SMARCAL1-202ENST00000358207 PIM2Q9P1W9 311 aa10.69□□□□□ -0.7
SMARCAL1-202ENST00000358207 EFCAB8A8MWE9 144 aa10.69□□□□□ -0.7
SMARCAL1-202ENST00000358207 NBPF26B4DH59 902 aa10.69□□□□□ -0.7
SMARCAL1-202ENST00000358207 NEMFO60524 1076 aa10.69□□□□□ -0.7
SMARCAL1-202ENST00000358207 SNX1Q13596 522 aa10.69□□□□□ -0.7
SMARCAL1-202ENST00000358207 NBPF15Q8N660 670 aa10.69□□□□□ -0.7
SMARCAL1-202ENST00000358207 PARD6BQ9BYG5 372 aa10.69□□□□□ -0.7
SMARCAL1-202ENST00000358207 CHMP3Q9Y3E7 222 aa10.69□□□□□ -0.7
SMARCAL1-202ENST00000358207 CACNA1FO60840 1977 aa10.69□□□□□ -0.7
SMARCAL1-202ENST00000358207 ZNF609O15014 1411 aa10.69□□□□□ -0.7
SMARCAL1-202ENST00000358207 SRGAP3O43295 1099 aa10.69□□□□□ -0.7
SMARCAL1-202ENST00000358207 SKAP2O75563 359 aaPredicted RBP10.69□□□□□ -0.7
SMARCAL1-202ENST00000358207 MAP4K4O95819 1239 aaPredicted RBP10.69□□□□□ -0.7
SMARCAL1-202ENST00000358207 DPEP1P16444 411 aa10.69□□□□□ -0.7
SMARCAL1-202ENST00000358207 USP8P40818 1118 aa10.69□□□□□ -0.7
SMARCAL1-202ENST00000358207 TBC1D25Q3MII6 688 aa10.69□□□□□ -0.7
SMARCAL1-202ENST00000358207 CHMLP26374 656 aa10.68□□□□□ -0.7
SMARCAL1-202ENST00000358207 APLP1P51693 650 aa10.68□□□□□ -0.7
SMARCAL1-202ENST00000358207 PSMD2Q13200 908 aa10.68□□□□□ -0.7
SMARCAL1-202ENST00000358207 MAP3K11Q16584 847 aa10.68□□□□□ -0.7
SMARCAL1-202ENST00000358207 ANKRD23Q86SG2 305 aa10.68□□□□□ -0.7
SMARCAL1-202ENST00000358207 PALD1Q9ULE6 856 aa10.68□□□□□ -0.7
SMARCAL1-202ENST00000358207 SURF6O75683 361 aaKnown RBP10.68□□□□□ -0.7
SMARCAL1-202ENST00000358207 ZSCAN22P10073 491 aaPredicted RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms