RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 MFSD6Q6ZSS7 791 aa20.17■□□□□ 0.82
TPM1-205ENST00000357980 CHST3Q7LGC8 479 aa20.17■□□□□ 0.82
TPM1-205ENST00000357980 TAOK3Q9H2K8 898 aa20.17■□□□□ 0.82
TPM1-205ENST00000357980 CNNM2Q9H8M5 875 aa20.17■□□□□ 0.82
TPM1-205ENST00000357980 CHMP5Q9NZZ3 219 aa20.17■□□□□ 0.82
TPM1-205ENST00000357980 ARPP21Q9UBL0 812 aaPredicted RBP20.17■□□□□ 0.82
TPM1-205ENST00000357980 CIZ1Q9ULV3 898 aaPredicted RBP20.17■□□□□ 0.82
TPM1-205ENST00000357980 CYP2D7A0A087X1C5 515 aa20.16■□□□□ 0.82
TPM1-205ENST00000357980 B4E1Z4 1266 aa20.16■□□□□ 0.82
TPM1-205ENST00000357980 PRC1O43663 620 aa20.16■□□□□ 0.82
TPM1-205ENST00000357980 IARSP41252 1262 aaKnown RBP20.16■□□□□ 0.82
TPM1-205ENST00000357980 ST3GAL1Q11201 340 aa20.16■□□□□ 0.82
TPM1-205ENST00000357980 BRF1Q92994 677 aa20.16■□□□□ 0.82
TPM1-205ENST00000357980 MRIQ9BWK5 157 aa20.16■□□□□ 0.82
TPM1-205ENST00000357980 CWC22Q9HCG8 908 aaKnown RBP20.16■□□□□ 0.82
TPM1-205ENST00000357980 BCS1LQ9Y276 419 aa20.16■□□□□ 0.82
TPM1-205ENST00000357980 MYH1P12882 1939 aa20.16■□□□□ 0.82
TPM1-205ENST00000357980 USP5P45974 858 aa20.16■□□□□ 0.82
TPM1-205ENST00000357980 SCNN1DP51172 638 aa20.16■□□□□ 0.82
TPM1-205ENST00000357980 CYB5R4Q7L1T6 521 aa20.16■□□□□ 0.82
TPM1-205ENST00000357980 TGFBRAP1Q8WUH2 860 aa20.16■□□□□ 0.82
TPM1-205ENST00000357980 TEKT1Q969V4 418 aa20.16■□□□□ 0.82
TPM1-205ENST00000357980 RNF41Q9H4P4 317 aaPredicted RBP20.16■□□□□ 0.82
TPM1-205ENST00000357980 FGRP09769 529 aa20.15■□□□□ 0.82
TPM1-205ENST00000357980 HDLBPQ00341 1268 aaKnown RBP20.15■□□□□ 0.82
TPM1-205ENST00000357980 KIAA0825Q8IV33 1275 aa20.15■□□□□ 0.82
TPM1-205ENST00000357980 TEX11Q8IYF3 940 aa20.15■□□□□ 0.82
TPM1-205ENST00000357980 KRT23Q9C075 422 aa20.15■□□□□ 0.82
TPM1-205ENST00000357980 LTBP3Q9NS15 1303 aa20.15■□□□□ 0.82
TPM1-205ENST00000357980 EVCP57679 992 aa20.14■□□□□ 0.81
TPM1-205ENST00000357980 FGD1P98174 961 aa20.14■□□□□ 0.81
TPM1-205ENST00000357980 EVX2Q03828 476 aa20.14■□□□□ 0.81
TPM1-205ENST00000357980 ZDHHC15Q96MV8 337 aa20.14■□□□□ 0.81
TPM1-205ENST00000357980 MCM9Q9NXL9 1143 aa20.14■□□□□ 0.81
TPM1-205ENST00000357980 USP17L8P0C7I0 530 aa20.13■□□□□ 0.81
TPM1-205ENST00000357980 PCP11498 1178 aaKnown RBP20.13■□□□□ 0.81
TPM1-205ENST00000357980 CRKP46108 304 aa20.13■□□□□ 0.81
TPM1-205ENST00000357980 APOBEC3HQ6NTF7 200 aaKnown RBP20.13■□□□□ 0.81
TPM1-205ENST00000357980 NIM1KQ8IY84 436 aa20.13■□□□□ 0.81
TPM1-205ENST00000357980 GPHNQ9NQX3 736 aaPredicted RBP20.13■□□□□ 0.81
TPM1-205ENST00000357980 ZNRF3Q9ULT6 936 aa20.13■□□□□ 0.81
TPM1-205ENST00000357980 FLT1P17948 1338 aa20.13■□□□□ 0.81
TPM1-205ENST00000357980 ROBO3Q96MS0 1386 aa20.13■□□□□ 0.81
TPM1-205ENST00000357980 KDM4AO75164 1064 aa20.13■□□□□ 0.81
TPM1-205ENST00000357980 VIL1P09327 827 aaKnown RBP20.13■□□□□ 0.81
TPM1-205ENST00000357980 CYP2D6P10635 497 aa20.13■□□□□ 0.81
TPM1-205ENST00000357980 C12orf60Q5U649 245 aa20.13■□□□□ 0.81
TPM1-205ENST00000357980 CCDC83Q8IWF9 413 aa20.13■□□□□ 0.81
TPM1-205ENST00000357980 NECAB1Q8N987 351 aa20.13■□□□□ 0.81
TPM1-205ENST00000357980 ZSWIM5Q9P217 1185 aa20.13■□□□□ 0.81
TPM1-205ENST00000357980 MYO3BQ8WXR4 1341 aa20.12■□□□□ 0.81
TPM1-205ENST00000357980 APOBRQ0VD83 1088 aa20.12■□□□□ 0.81
TPM1-205ENST00000357980 RSBN1LQ6PCB5 846 aaPredicted RBP20.12■□□□□ 0.81
TPM1-205ENST00000357980 MAPKAPK5Q8IW41 473 aa20.12■□□□□ 0.81
TPM1-205ENST00000357980 GMLQ99445 158 aa20.12■□□□□ 0.81
TPM1-205ENST00000357980 SERPINA10Q9UK55 444 aa20.12■□□□□ 0.81
TPM1-205ENST00000357980 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.12■□□□□ 0.81
TPM1-205ENST00000357980 PSMD14O00487 310 aa20.11■□□□□ 0.81
TPM1-205ENST00000357980 RAD17O75943 681 aa20.11■□□□□ 0.81
TPM1-205ENST00000357980 STK11IPQ8N1F8 1099 aa20.11■□□□□ 0.81
TPM1-205ENST00000357980 TMEM87BQ96K49 555 aa20.11■□□□□ 0.81
TPM1-205ENST00000357980 WDHD1O75717 1129 aaPredicted RBP20.11■□□□□ 0.81
TPM1-205ENST00000357980 RRP12Q5JTH9 1297 aaKnown RBP20.11■□□□□ 0.81
TPM1-205ENST00000357980 IGDCC4Q8TDY8 1250 aa20.11■□□□□ 0.81
TPM1-205ENST00000357980 GTF3C6Q969F1 213 aa20.11■□□□□ 0.81
TPM1-205ENST00000357980 ZNF274Q96GC6 653 aaPredicted RBP20.11■□□□□ 0.81
TPM1-205ENST00000357980 FHDC1Q9C0D6 1143 aaPredicted RBP20.11■□□□□ 0.81
TPM1-205ENST00000357980 ANGEL1Q9UNK9 670 aaKnown RBP20.11■□□□□ 0.81
TPM1-205ENST00000357980 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.11■□□□□ 0.81
TPM1-205ENST00000357980 SH2B2O14492 632 aaPredicted RBP20.1■□□□□ 0.81
TPM1-205ENST00000357980 ORC4O43929 436 aa20.1■□□□□ 0.81
TPM1-205ENST00000357980 PFKFB2O60825 505 aa20.1■□□□□ 0.81
TPM1-205ENST00000357980 CDC42EP5Q6NZY7 148 aa20.1■□□□□ 0.81
TPM1-205ENST00000357980 MTA3Q9BTC8 594 aa20.1■□□□□ 0.81
TPM1-205ENST00000357980 ESR2Q92731 530 aa20.09■□□□□ 0.81
TPM1-205ENST00000357980 TOMM22Q9NS69 142 aa20.09■□□□□ 0.81
TPM1-205ENST00000357980 USP40Q9NVE5 1235 aa20.09■□□□□ 0.81
TPM1-205ENST00000357980 PCDHAC2Q9Y5I4 1007 aa20.09■□□□□ 0.81
TPM1-205ENST00000357980 SLC3A2P08195 630 aaKnown RBP20.09■□□□□ 0.81
TPM1-205ENST00000357980 PDIA3P30101 505 aaKnown RBP20.09■□□□□ 0.81
TPM1-205ENST00000357980 STK3Q13188 491 aa20.09■□□□□ 0.81
TPM1-205ENST00000357980 LY9Q9HBG7 655 aa20.09■□□□□ 0.81
TPM1-205ENST00000357980 SAP30BPQ9UHR5 308 aaKnown RBP20.09■□□□□ 0.81
TPM1-205ENST00000357980 BRPF3Q9ULD4 1205 aa20.09■□□□□ 0.81
TPM1-205ENST00000357980 PLCD1P51178 756 aa20.08■□□□□ 0.8
TPM1-205ENST00000357980 PRELPP51888 382 aa20.08■□□□□ 0.8
TPM1-205ENST00000357980 RASSF7Q02833 373 aa20.08■□□□□ 0.8
TPM1-205ENST00000357980 CXCL9Q07325 125 aa20.08■□□□□ 0.8
TPM1-205ENST00000357980 RAB3GAP1Q15042 981 aa20.08■□□□□ 0.8
TPM1-205ENST00000357980 AMOTL1Q8IY63 956 aa20.08■□□□□ 0.8
TPM1-205ENST00000357980 DDX4Q9NQI0 724 aaKnown RBP20.08■□□□□ 0.8
TPM1-205ENST00000357980 PRDM1O75626 825 aa20.07■□□□□ 0.8
TPM1-205ENST00000357980 LIFRP42702 1097 aa20.07■□□□□ 0.8
TPM1-205ENST00000357980 SCRN1Q12765 414 aa20.07■□□□□ 0.8
TPM1-205ENST00000357980 SLC4A8Q2Y0W8 1093 aa20.07■□□□□ 0.8
TPM1-205ENST00000357980 SRCAPQ6ZRS2 3230 aa20.07■□□□□ 0.8
TPM1-205ENST00000357980 SGMS1Q86VZ5 419 aa20.07■□□□□ 0.8
TPM1-205ENST00000357980 JDP2Q8WYK2 163 aa20.07■□□□□ 0.8
TPM1-205ENST00000357980 POLR3DP05423 398 aaPredicted RBP20.06■□□□□ 0.8
TPM1-205ENST00000357980 PDE4BQ07343 736 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms