RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 MLKLQ8NB16 471 aa20.34■□□□□ 0.85
RTN4-204ENST00000357732 MNS1Q8NEH6 495 aa20.34■□□□□ 0.85
RTN4-204ENST00000357732 IGDCC4Q8TDY8 1250 aa20.34■□□□□ 0.85
RTN4-204ENST00000357732 MTA3Q9BTC8 594 aa20.34■□□□□ 0.85
RTN4-204ENST00000357732 TIAM2Q8IVF5 1701 aa20.34■□□□□ 0.85
RTN4-204ENST00000357732 CLCN6P51797 869 aa20.34■□□□□ 0.85
RTN4-204ENST00000357732 TBX2Q13207 712 aaPredicted RBP20.34■□□□□ 0.85
RTN4-204ENST00000357732 PNOCQ13519 176 aa20.34■□□□□ 0.85
RTN4-204ENST00000357732 ARHGAP29Q52LW3 1261 aa20.34■□□□□ 0.85
RTN4-204ENST00000357732 METTL24Q5JXM2 366 aa20.34■□□□□ 0.85
RTN4-204ENST00000357732 CNNM2Q9H8M5 875 aa20.34■□□□□ 0.85
RTN4-204ENST00000357732 TBC1D2BQ9UPU7 963 aa20.34■□□□□ 0.85
RTN4-204ENST00000357732 UQCRFS1P1P0C7P4 283 aa20.33■□□□□ 0.85
RTN4-204ENST00000357732 ZNF579Q8NAF0 562 aaKnown RBP20.33■□□□□ 0.85
RTN4-204ENST00000357732 GOLGA8AA7E2F4 631 aa20.32■□□□□ 0.84
RTN4-204ENST00000357732 RCAN1P53805 252 aa20.32■□□□□ 0.84
RTN4-204ENST00000357732 KANK3Q6NY19 840 aa20.32■□□□□ 0.84
RTN4-204ENST00000357732 LY9Q9HBG7 655 aa20.32■□□□□ 0.84
RTN4-204ENST00000357732 FHOD1Q9Y613 1164 aa20.32■□□□□ 0.84
RTN4-204ENST00000357732 UBN2Q6ZU65 1347 aa20.32■□□□□ 0.84
RTN4-204ENST00000357732 TADA3O75528 432 aa20.32■□□□□ 0.84
RTN4-204ENST00000357732 ZRANB2O95218 330 aaKnown RBP eCLIP20.32■□□□□ 0.84
RTN4-204ENST00000357732 FMNL1O95466 1100 aaPredicted RBP20.32■□□□□ 0.84
RTN4-204ENST00000357732 ARID4AP29374 1257 aaPredicted RBP20.32■□□□□ 0.84
RTN4-204ENST00000357732 CDC27P30260 824 aa20.32■□□□□ 0.84
RTN4-204ENST00000357732 MDM2Q00987 491 aaPredicted RBP20.32■□□□□ 0.84
RTN4-204ENST00000357732 SSRP1Q08945 709 aaKnown RBP20.32■□□□□ 0.84
RTN4-204ENST00000357732 SAFBQ15424 915 aaKnown RBP eCLIP20.32■□□□□ 0.841e-6■■□□□ 14.5
RTN4-204ENST00000357732 TMCO3Q6UWJ1 677 aa20.32■□□□□ 0.84
RTN4-204ENST00000357732 RAB11FIP4Q86YS3 637 aa20.32■□□□□ 0.84
RTN4-204ENST00000357732 TMEM139Q8IV31 216 aa20.32■□□□□ 0.84
RTN4-204ENST00000357732 NOSTRINQ8IVI9 506 aa20.32■□□□□ 0.84
RTN4-204ENST00000357732 ENOX1Q8TC92 643 aaKnown RBP20.32■□□□□ 0.84
RTN4-204ENST00000357732 DPF2Q92785 391 aa20.32■□□□□ 0.84
RTN4-204ENST00000357732 STRN4Q9NRL3 753 aa20.32■□□□□ 0.84
RTN4-204ENST00000357732 PCDHA5Q9Y5H7 936 aa20.32■□□□□ 0.84
RTN4-204ENST00000357732 IFNAR1P17181 557 aa20.31■□□□□ 0.84
RTN4-204ENST00000357732 LONRF3Q496Y0 759 aa20.31■□□□□ 0.84
RTN4-204ENST00000357732 RILPL1Q5EBL4 403 aa20.31■□□□□ 0.84
RTN4-204ENST00000357732 SYNE4Q8N205 404 aa20.31■□□□□ 0.84
RTN4-204ENST00000357732 UTP14AQ9BVJ6 771 aaKnown RBP20.31■□□□□ 0.84
RTN4-204ENST00000357732 CARD10Q9BWT7 1032 aa20.31■□□□□ 0.84
RTN4-204ENST00000357732 FANCLQ9NW38 375 aa20.31■□□□□ 0.84
RTN4-204ENST00000357732 SHANK3Q9BYB0 1731 aa20.31■□□□□ 0.84
RTN4-204ENST00000357732 LDHAL6AQ6ZMR3 332 aa20.31■□□□□ 0.84
RTN4-204ENST00000357732 AIFM3Q96NN9 605 aa20.31■□□□□ 0.84
RTN4-204ENST00000357732 FOXP1Q9H334 677 aaPredicted RBP20.31■□□□□ 0.84
RTN4-204ENST00000357732 PPP2R2CQ9Y2T4 447 aa20.31■□□□□ 0.84
RTN4-204ENST00000357732 PARP3Q9Y6F1 533 aa20.31■□□□□ 0.84
RTN4-204ENST00000357732 ARAP2Q8WZ64 1704 aa20.31■□□□□ 0.84
RTN4-204ENST00000357732 NFXL1Q6ZNB6 911 aa20.3■□□□□ 0.84
RTN4-204ENST00000357732 MICU3Q86XE3 530 aa20.3■□□□□ 0.84
RTN4-204ENST00000357732 VGLL2Q8N8G2 317 aa20.3■□□□□ 0.84
RTN4-204ENST00000357732 MYH3P11055 1940 aa20.3■□□□□ 0.84
RTN4-204ENST00000357732 ANKRD18BA2A2Z9 1011 aa20.3■□□□□ 0.84
RTN4-204ENST00000357732 PNMA6AP0CW24 399 aaPredicted RBP20.3■□□□□ 0.84
RTN4-204ENST00000357732 ZNF18P17022 549 aa20.3■□□□□ 0.84
RTN4-204ENST00000357732 TMEM67Q5HYA8 995 aa20.3■□□□□ 0.84
RTN4-204ENST00000357732 SPECC1LQ69YQ0 1117 aa20.3■□□□□ 0.84
RTN4-204ENST00000357732 DNAJC10Q8IXB1 793 aa20.3■□□□□ 0.84
RTN4-204ENST00000357732 CCDC34Q96HJ3 373 aa20.3■□□□□ 0.84
RTN4-204ENST00000357732 BAG1Q99933 345 aaPredicted RBP20.3■□□□□ 0.84
RTN4-204ENST00000357732 KRT23Q9C075 422 aa20.3■□□□□ 0.84
RTN4-204ENST00000357732 FAM217BQ9NTX9 383 aaPredicted RBP20.3■□□□□ 0.84
RTN4-204ENST00000357732 TMOD3Q9NYL9 352 aa20.3■□□□□ 0.84
RTN4-204ENST00000357732 CEP131Q9UPN4 1083 aa20.3■□□□□ 0.84
RTN4-204ENST00000357732 SLC12A7Q9Y666 1083 aa20.3■□□□□ 0.84
RTN4-204ENST00000357732 B4E1Z4 1266 aa20.29■□□□□ 0.84
RTN4-204ENST00000357732 RANBP6O60518 1105 aaKnown RBP20.29■□□□□ 0.84
RTN4-204ENST00000357732 PTPREP23469 700 aa20.29■□□□□ 0.84
RTN4-204ENST00000357732 SARSP49591 514 aaKnown RBP20.29■□□□□ 0.84
RTN4-204ENST00000357732 POSTNQ15063 836 aa20.29■□□□□ 0.84
RTN4-204ENST00000357732 ISM2Q6H9L7 571 aa20.29■□□□□ 0.84
RTN4-204ENST00000357732 GIGYF2Q6Y7W6 1299 aaKnown RBP20.29■□□□□ 0.84
RTN4-204ENST00000357732 NUTM2AQ8IVF1 878 aaPredicted RBP20.29■□□□□ 0.84
RTN4-204ENST00000357732 PHKBQ93100 1093 aa20.29■□□□□ 0.84
RTN4-204ENST00000357732 ZNF532Q9HCE3 1301 aa20.29■□□□□ 0.84
RTN4-204ENST00000357732 TCRBV5S4A2TA0A5A2 114 aa20.29■□□□□ 0.84
RTN4-204ENST00000357732 VWA3AA6NCI4 1184 aa20.29■□□□□ 0.84
RTN4-204ENST00000357732 IGSF3O75054 1194 aa20.29■□□□□ 0.84
RTN4-204ENST00000357732 MMP1P03956 469 aa20.29■□□□□ 0.84
RTN4-204ENST00000357732 APPP05067 770 aa20.29■□□□□ 0.84
RTN4-204ENST00000357732 PDE6AP16499 860 aa20.29■□□□□ 0.84
RTN4-204ENST00000357732 FOXP4Q8IVH2 680 aaPredicted RBP20.29■□□□□ 0.84
RTN4-204ENST00000357732 STRBPQ96SI9 672 aaKnown RBP20.29■□□□□ 0.84
RTN4-204ENST00000357732 ASAP1Q9ULH1 1129 aa20.29■□□□□ 0.84
RTN4-204ENST00000357732 CHD4Q14839 1912 aa20.29■□□□□ 0.84
RTN4-204ENST00000357732 PATL2C9JE40 543 aaKnown RBP20.28■□□□□ 0.84
RTN4-204ENST00000357732 URI1O94763 535 aaPredicted RBP20.28■□□□□ 0.84
RTN4-204ENST00000357732 PDE8BO95263 885 aa20.28■□□□□ 0.84
RTN4-204ENST00000357732 ITGA6P23229 1130 aa20.28■□□□□ 0.84
RTN4-204ENST00000357732 TRIM22Q8IYM9 498 aa20.28■□□□□ 0.84
RTN4-204ENST00000357732 GPR161Q8N6U8 529 aaKnown RBP20.28■□□□□ 0.84
RTN4-204ENST00000357732 TTLL11Q8NHH1 800 aa20.28■□□□□ 0.84
RTN4-204ENST00000357732 AIDAQ96BJ3 306 aa20.28■□□□□ 0.84
RTN4-204ENST00000357732 CLIC6Q96NY7 704 aa20.28■□□□□ 0.84
RTN4-204ENST00000357732 LRP5O75197 1615 aa20.28■□□□□ 0.84
RTN4-204ENST00000357732 ANKRD36CQ5JPF3 1778 aa20.28■□□□□ 0.84
RTN4-204ENST00000357732 ERCC5P28715 1186 aaPredicted RBP20.28■□□□□ 0.84
RTN4-204ENST00000357732 CTSWP56202 376 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms