RNA–Protein interactions for RNA: ENST00000357710.8

PSEN1-202, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-202ENST00000357710 PAPOLAP51003 745 aaKnown RBP12.81□□□□□ -0.36
PSEN1-202ENST00000357710 ETF1P62495 437 aaKnown RBP12.81□□□□□ -0.36
PSEN1-202ENST00000357710 DCTN1Q14203 1278 aa12.81□□□□□ -0.36
PSEN1-202ENST00000357710 CCDC57Q2TAC2 916 aa12.81□□□□□ -0.36
PSEN1-202ENST00000357710 SFMBT2Q5VUG0 894 aa12.81□□□□□ -0.36
PSEN1-202ENST00000357710 LRRN4CLQ8ND94 238 aa12.81□□□□□ -0.36
PSEN1-202ENST00000357710 CABLES1Q8TDN4 633 aa12.81□□□□□ -0.36
PSEN1-202ENST00000357710 EPAS1Q99814 870 aa12.81□□□□□ -0.36
PSEN1-202ENST00000357710 TRIM35Q9UPQ4 493 aa12.81□□□□□ -0.36
PSEN1-202ENST00000357710 RGPD2P0DJD1 1756 aa12.81□□□□□ -0.36
PSEN1-202ENST00000357710 PHLPP1O60346 1717 aa12.81□□□□□ -0.36
PSEN1-202ENST00000357710 TOM1O60784 492 aa12.81□□□□□ -0.36
PSEN1-202ENST00000357710 IQCF2Q8IXL9 164 aa12.81□□□□□ -0.36
PSEN1-202ENST00000357710 TRIM58Q8NG06 486 aa12.81□□□□□ -0.36
PSEN1-202ENST00000357710 GOLGA1Q92805 767 aa12.81□□□□□ -0.36
PSEN1-202ENST00000357710 CCDC47Q96A33 483 aaKnown RBP12.81□□□□□ -0.36
PSEN1-202ENST00000357710 PPP1R13BQ96KQ4 1090 aa12.81□□□□□ -0.36
PSEN1-202ENST00000357710 IMPACTQ9P2X3 320 aa12.81□□□□□ -0.36
PSEN1-202ENST00000357710 DDX20Q9UHI6 824 aaKnown RBP12.81□□□□□ -0.36
PSEN1-202ENST00000357710 WDR37Q9Y2I8 494 aa12.81□□□□□ -0.36
PSEN1-202ENST00000357710 PCDHGC5Q9Y5F6 944 aa12.81□□□□□ -0.36
PSEN1-202ENST00000357710 COL22A1Q8NFW1 1626 aaPredicted RBP12.8□□□□□ -0.36
PSEN1-202ENST00000357710 F8VZ95 297 aa12.8□□□□□ -0.36
PSEN1-202ENST00000357710 KIF5CO60282 957 aa12.8□□□□□ -0.36
PSEN1-202ENST00000357710 TXLNAP40222 546 aa12.8□□□□□ -0.36
PSEN1-202ENST00000357710 KIF4BQ2VIQ3 1234 aa12.8□□□□□ -0.36
PSEN1-202ENST00000357710 PAGR1Q9BTK6 254 aa12.8□□□□□ -0.36
PSEN1-202ENST00000357710 KIAA0232Q92628 1395 aa12.8□□□□□ -0.36
PSEN1-202ENST00000357710 NCAPD2Q15021 1401 aa12.8□□□□□ -0.36
PSEN1-202ENST00000357710 CCDC69A6NI79 296 aa12.8□□□□□ -0.36
PSEN1-202ENST00000357710 RASSF9O75901 435 aa12.8□□□□□ -0.36
PSEN1-202ENST00000357710 PUS10Q3MIT2 529 aaKnown RBP12.8□□□□□ -0.36
PSEN1-202ENST00000357710 VPS53Q5VIR6 699 aa12.8□□□□□ -0.36
PSEN1-202ENST00000357710 ZKSCAN2Q63HK3 967 aa12.8□□□□□ -0.36
PSEN1-202ENST00000357710 MIS18BP1Q6P0N0 1132 aa12.8□□□□□ -0.36
PSEN1-202ENST00000357710 ANKRD24Q8TF21 1146 aa12.8□□□□□ -0.36
PSEN1-202ENST00000357710 ARHGAP45Q92619 1136 aa12.8□□□□□ -0.36
PSEN1-202ENST00000357710 RBM41Q96IZ5 413 aaKnown RBP12.8□□□□□ -0.36
PSEN1-202ENST00000357710 TRIM4Q9C037 500 aa12.8□□□□□ -0.36
PSEN1-202ENST00000357710 VIPAS39Q9H9C1 493 aa12.8□□□□□ -0.36
PSEN1-202ENST00000357710 SPATA7Q9P0W8 599 aa12.8□□□□□ -0.36
PSEN1-202ENST00000357710 LMO7Q8WWI1 1683 aa12.79□□□□□ -0.36
PSEN1-202ENST00000357710 MAP3K11Q16584 847 aa12.79□□□□□ -0.36
PSEN1-202ENST00000357710 CCDC150Q8NCX0 1101 aa12.79□□□□□ -0.36
PSEN1-202ENST00000357710 LRRC59Q96AG4 307 aaKnown RBP12.79□□□□□ -0.36
PSEN1-202ENST00000357710 PARD6BQ9BYG5 372 aa12.79□□□□□ -0.36
PSEN1-202ENST00000357710 TMEM98Q9Y2Y6 226 aa12.79□□□□□ -0.36
PSEN1-202ENST00000357710 COL16A1Q07092 1604 aaPredicted RBP12.79□□□□□ -0.36
PSEN1-202ENST00000357710 SYT1P21579 422 aa12.79□□□□□ -0.36
PSEN1-202ENST00000357710 CCDC144BQ3MJ40 725 aa12.79□□□□□ -0.36
PSEN1-202ENST00000357710 GIMAP6Q6P9H5 292 aa12.79□□□□□ -0.36
PSEN1-202ENST00000357710 CCDC144CPQ8IYA2 1237 aa12.79□□□□□ -0.36
PSEN1-202ENST00000357710 JAKMIP2Q96AA8 810 aa12.79□□□□□ -0.36
PSEN1-202ENST00000357710 ENO4A6NNW6 628 aa12.78□□□□□ -0.36
PSEN1-202ENST00000357710 SMARCA5O60264 1052 aaPredicted RBP12.78□□□□□ -0.36
PSEN1-202ENST00000357710 TRPC1P48995 793 aa12.78□□□□□ -0.36
PSEN1-202ENST00000357710 AARSP49588 968 aaKnown RBP eCLIP12.78□□□□□ -0.36
PSEN1-202ENST00000357710 TYRO3Q06418 890 aa12.78□□□□□ -0.36
PSEN1-202ENST00000357710 CCDC181Q5TID7 509 aa12.78□□□□□ -0.36
PSEN1-202ENST00000357710 GBP7Q8N8V2 638 aaPredicted RBP12.78□□□□□ -0.36
PSEN1-202ENST00000357710 PHC3Q8NDX5 983 aa12.78□□□□□ -0.36
PSEN1-202ENST00000357710 MPHOSPH8Q99549 860 aa12.78□□□□□ -0.36
PSEN1-202ENST00000357710 GORASP1Q9BQQ3 440 aa12.78□□□□□ -0.36
PSEN1-202ENST00000357710 VCPKMTQ9H867 229 aa12.78□□□□□ -0.36
PSEN1-202ENST00000357710 FAM204AQ9H8W3 233 aa12.78□□□□□ -0.36
PSEN1-202ENST00000357710 CBX8Q9HC52 389 aa12.78□□□□□ -0.36
PSEN1-202ENST00000357710 SMNDC1O75940 238 aaKnown RBP eCLIP12.78□□□□□ -0.36
PSEN1-202ENST00000357710 VDRP11473 427 aa12.78□□□□□ -0.36
PSEN1-202ENST00000357710 KBTBD12Q3ZCT8 623 aa12.78□□□□□ -0.36
PSEN1-202ENST00000357710 BEND6Q5SZJ8 279 aaPredicted RBP12.78□□□□□ -0.36
PSEN1-202ENST00000357710 GGA2Q9UJY4 613 aa12.78□□□□□ -0.36
PSEN1-202ENST00000357710 RAB21Q9UL25 225 aa12.78□□□□□ -0.36
PSEN1-202ENST00000357710 THRAP3Q9Y2W1 955 aaKnown RBP12.78□□□□□ -0.36
PSEN1-202ENST00000357710 FAM200BP0CF97 657 aa12.77□□□□□ -0.36
PSEN1-202ENST00000357710 CCT5P48643 541 aa12.77□□□□□ -0.36
PSEN1-202ENST00000357710 DYNC1I2Q13409 638 aaKnown RBP12.77□□□□□ -0.36
PSEN1-202ENST00000357710 CUL3Q13618 768 aa12.77□□□□□ -0.36
PSEN1-202ENST00000357710 GCC1Q96CN9 775 aa12.77□□□□□ -0.36
PSEN1-202ENST00000357710 G3BP2Q9UN86 482 aaKnown RBP12.77□□□□□ -0.36
PSEN1-202ENST00000357710 ATP8A1Q9Y2Q0 1164 aa12.77□□□□□ -0.36
PSEN1-202ENST00000357710 GOLGA6L7A0A1B0GV03 622 aa12.77□□□□□ -0.37
PSEN1-202ENST00000357710 HARSP12081 509 aaKnown RBP12.77□□□□□ -0.37
PSEN1-202ENST00000357710 TAF7Q15545 349 aaPredicted RBP12.77□□□□□ -0.37
PSEN1-202ENST00000357710 SLC4A8Q2Y0W8 1093 aa12.77□□□□□ -0.37
PSEN1-202ENST00000357710 LUZP1Q86V48 1076 aa12.77□□□□□ -0.37
PSEN1-202ENST00000357710 MYOCDQ8IZQ8 938 aa12.77□□□□□ -0.37
PSEN1-202ENST00000357710 CARD6Q9BX69 1037 aa12.77□□□□□ -0.37
PSEN1-202ENST00000357710 OSBPL5Q9H0X9 879 aaPredicted RBP12.77□□□□□ -0.37
PSEN1-202ENST00000357710 PRDM11Q9NQV5 511 aa12.77□□□□□ -0.37
PSEN1-202ENST00000357710 TRMT1Q9NXH9 659 aaKnown RBP12.77□□□□□ -0.37
PSEN1-202ENST00000357710 AXIN2Q9Y2T1 843 aa12.77□□□□□ -0.37
PSEN1-202ENST00000357710 RNF8O76064 485 aa12.76□□□□□ -0.37
PSEN1-202ENST00000357710 SLC4A2P04920 1241 aa12.76□□□□□ -0.37
PSEN1-202ENST00000357710 CCDC40Q4G0X9 1142 aa12.76□□□□□ -0.37
PSEN1-202ENST00000357710 DZIP1LQ8IYY4 767 aaKnown RBP12.76□□□□□ -0.37
PSEN1-202ENST00000357710 GALNT15Q8N3T1 639 aa12.76□□□□□ -0.37
PSEN1-202ENST00000357710 LZICQ8WZA0 190 aa12.76□□□□□ -0.37
PSEN1-202ENST00000357710 SLC39A2Q9NP94 309 aa12.76□□□□□ -0.37
PSEN1-202ENST00000357710 DNAAF2Q9NVR5 837 aaKnown RBP12.76□□□□□ -0.37
PSEN1-202ENST00000357710 MRFAP1Q9Y605 127 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms