RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 LARP1BQ659C4 914 aaKnown RBP14.8□□□□□ -0.04
RTFDC1-202ENST00000357348 MIGA1Q8NAN2 632 aa14.8□□□□□ -0.04
RTFDC1-202ENST00000357348 SPC24Q8NBT2 197 aa14.8□□□□□ -0.04
RTFDC1-202ENST00000357348 KCNQ5Q9NR82 932 aa14.8□□□□□ -0.04
RTFDC1-202ENST00000357348 VPS37CA5D8V6 355 aaPredicted RBP14.79□□□□□ -0.04
RTFDC1-202ENST00000357348 GTF2IP78347 998 aa14.79□□□□□ -0.04
RTFDC1-202ENST00000357348 PLCB2Q00722 1185 aa14.79□□□□□ -0.04
RTFDC1-202ENST00000357348 CREB3L3Q68CJ9 461 aa14.79□□□□□ -0.04
RTFDC1-202ENST00000357348 ADGRA1Q86SQ6 560 aa14.79□□□□□ -0.04
RTFDC1-202ENST00000357348 SCAND2PQ9GZW5 306 aaPredicted RBP14.79□□□□□ -0.04
RTFDC1-202ENST00000357348 CBX8Q9HC52 389 aa14.79□□□□□ -0.04
RTFDC1-202ENST00000357348 SMTNL1A8MU46 457 aa14.78□□□□□ -0.04
RTFDC1-202ENST00000357348 ZKSCAN1P17029 563 aaPredicted RBP14.78□□□□□ -0.04
RTFDC1-202ENST00000357348 CDC25BP30305 580 aa14.78□□□□□ -0.04
RTFDC1-202ENST00000357348 ZNF75DP51815 510 aa14.78□□□□□ -0.04
RTFDC1-202ENST00000357348 LRRFIP1Q32MZ4 808 aaKnown RBP14.78□□□□□ -0.04
RTFDC1-202ENST00000357348 DALRD3Q5D0E6 543 aaKnown RBP14.78□□□□□ -0.04
RTFDC1-202ENST00000357348 CDC37L1Q7L3B6 337 aa14.78□□□□□ -0.04
RTFDC1-202ENST00000357348 APPBP2Q92624 585 aa14.78□□□□□ -0.04
RTFDC1-202ENST00000357348 MXD3Q9BW11 206 aa14.78□□□□□ -0.04
RTFDC1-202ENST00000357348 CLSTN2Q9H4D0 955 aa14.78□□□□□ -0.04
RTFDC1-202ENST00000357348 RBM8AQ9Y5S9 174 aaKnown RBP14.78□□□□□ -0.04
RTFDC1-202ENST00000357348 SEMA3EO15041 775 aa14.78□□□□□ -0.04
RTFDC1-202ENST00000357348 ZFYP08048 801 aaPredicted RBP14.78□□□□□ -0.04
RTFDC1-202ENST00000357348 PSMA5P28066 241 aa14.78□□□□□ -0.04
RTFDC1-202ENST00000357348 NCBP1Q09161 790 aaKnown RBP14.78□□□□□ -0.04
RTFDC1-202ENST00000357348 ZSCAN25Q6NSZ9 544 aa14.78□□□□□ -0.04
RTFDC1-202ENST00000357348 C15orf52Q6ZUT6 534 aaKnown RBP14.78□□□□□ -0.04
RTFDC1-202ENST00000357348 EYA3Q99504 573 aa14.78□□□□□ -0.04
RTFDC1-202ENST00000357348 HELLSQ9NRZ9 838 aa14.78□□□□□ -0.04
RTFDC1-202ENST00000357348 RFX7Q2KHR2 1363 aa14.78□□□□□ -0.04
RTFDC1-202ENST00000357348 BRCA1P38398 1863 aaKnown RBP14.78□□□□□ -0.04
RTFDC1-202ENST00000357348 TCRBV5S4A2TA0A5A2 114 aa14.77□□□□□ -0.04
RTFDC1-202ENST00000357348 GPAA1O43292 621 aa14.77□□□□□ -0.04
RTFDC1-202ENST00000357348 IL1R1P14778 569 aa14.77□□□□□ -0.04
RTFDC1-202ENST00000357348 CYP7A1P22680 504 aa14.77□□□□□ -0.04
RTFDC1-202ENST00000357348 ANKRD1Q15327 319 aa14.77□□□□□ -0.04
RTFDC1-202ENST00000357348 TSGA10IPQ3SY00 556 aa14.77□□□□□ -0.04
RTFDC1-202ENST00000357348 CCDC93Q567U6 631 aa14.77□□□□□ -0.04
RTFDC1-202ENST00000357348 CCDC186Q7Z3E2 898 aa14.77□□□□□ -0.04
RTFDC1-202ENST00000357348 LUZP1Q86V48 1076 aa14.77□□□□□ -0.04
RTFDC1-202ENST00000357348 NECAB1Q8N987 351 aa14.77□□□□□ -0.04
RTFDC1-202ENST00000357348 ZNF384Q8TF68 577 aa14.77□□□□□ -0.04
RTFDC1-202ENST00000357348 ZNF277Q9NRM2 450 aaPredicted RBP14.77□□□□□ -0.04
RTFDC1-202ENST00000357348 CD2APQ9Y5K6 639 aa14.77□□□□□ -0.04
RTFDC1-202ENST00000357348 CCDC88AQ3V6T2 1871 aa14.77□□□□□ -0.04
RTFDC1-202ENST00000357348 F8W031 263 aaPredicted RBP14.77□□□□□ -0.05
RTFDC1-202ENST00000357348 PPIP5K2O43314 1243 aa14.77□□□□□ -0.05
RTFDC1-202ENST00000357348 CAVIN2O95810 425 aa14.77□□□□□ -0.05
RTFDC1-202ENST00000357348 MECOMQ03112 1051 aa14.77□□□□□ -0.05
RTFDC1-202ENST00000357348 FHDC1Q9C0D6 1143 aaPredicted RBP14.77□□□□□ -0.05
RTFDC1-202ENST00000357348 TNMDQ9H2S6 317 aa14.77□□□□□ -0.05
RTFDC1-202ENST00000357348 SLC27A2O14975 620 aa14.76□□□□□ -0.05
RTFDC1-202ENST00000357348 ANO6Q4KMQ2 910 aa14.76□□□□□ -0.05
RTFDC1-202ENST00000357348 MFSD14BQ5SR56 506 aa14.76□□□□□ -0.05
RTFDC1-202ENST00000357348 AIDAQ96BJ3 306 aa14.76□□□□□ -0.05
RTFDC1-202ENST00000357348 COA1Q9GZY4 146 aa14.76□□□□□ -0.05
RTFDC1-202ENST00000357348 ARMT1Q9H993 441 aa14.76□□□□□ -0.05
RTFDC1-202ENST00000357348 DACT1Q9NYF0 836 aa14.76□□□□□ -0.05
RTFDC1-202ENST00000357348 OGFRQ9NZT2 677 aa14.76□□□□□ -0.05
RTFDC1-202ENST00000357348 ZHX1Q9UKY1 873 aaPredicted RBP14.76□□□□□ -0.05
RTFDC1-202ENST00000357348 PAXBP1Q9Y5B6 917 aa14.76□□□□□ -0.05
RTFDC1-202ENST00000357348 MBD4O95243 580 aa14.76□□□□□ -0.05
RTFDC1-202ENST00000357348 UBE3CQ15386 1083 aa14.76□□□□□ -0.05
RTFDC1-202ENST00000357348 DIXDC1Q155Q3 683 aa14.76□□□□□ -0.05
RTFDC1-202ENST00000357348 TPRNQ4KMQ1 711 aa14.76□□□□□ -0.05
RTFDC1-202ENST00000357348 TTLL5Q6EMB2 1281 aa14.76□□□□□ -0.05
RTFDC1-202ENST00000357348 NAA16Q6N069 864 aaPredicted RBP14.76□□□□□ -0.05
RTFDC1-202ENST00000357348 DZIP1Q86YF9 867 aaKnown RBP14.76□□□□□ -0.05
RTFDC1-202ENST00000357348 LEO1Q8WVC0 666 aaPredicted RBP14.76□□□□□ -0.05
RTFDC1-202ENST00000357348 SCN9AQ15858 1988 aa14.75□□□□□ -0.05
RTFDC1-202ENST00000357348 ECE2O60344 883 aa14.75□□□□□ -0.05
RTFDC1-202ENST00000357348 APPP05067 770 aa14.75□□□□□ -0.05
RTFDC1-202ENST00000357348 LDHBP07195 334 aaKnown RBP14.75□□□□□ -0.05
RTFDC1-202ENST00000357348 HSPD1P10809 573 aaKnown RBP14.75□□□□□ -0.05
RTFDC1-202ENST00000357348 U2AF2P26368 475 aaKnown RBP eCLIP14.75□□□□□ -0.05
RTFDC1-202ENST00000357348 WDR66Q8TBY9 1149 aa14.75□□□□□ -0.05
RTFDC1-202ENST00000357348 NSUN4Q96CB9 384 aaKnown RBP14.75□□□□□ -0.05
RTFDC1-202ENST00000357348 TAF6LQ9Y6J9 622 aa14.75□□□□□ -0.05
RTFDC1-202ENST00000357348 SNED1Q8TER0 1413 aa14.75□□□□□ -0.05
RTFDC1-202ENST00000357348 RPS6KB1P23443 525 aa14.74□□□□□ -0.05
RTFDC1-202ENST00000357348 DYNLL1P63167 89 aaKnown RBP14.74□□□□□ -0.05
RTFDC1-202ENST00000357348 TOB2Q14106 344 aaPredicted RBP14.74□□□□□ -0.05
RTFDC1-202ENST00000357348 SARM1Q6SZW1 724 aa14.74□□□□□ -0.05
RTFDC1-202ENST00000357348 LCORLQ8N3X6 602 aa14.74□□□□□ -0.05
RTFDC1-202ENST00000357348 PRKAB2O43741 272 aa14.74□□□□□ -0.05
RTFDC1-202ENST00000357348 LRMPQ12912 555 aa14.74□□□□□ -0.05
RTFDC1-202ENST00000357348 CAMK4Q16566 473 aa14.74□□□□□ -0.05
RTFDC1-202ENST00000357348 CC2D2BQ6DHV5 1058 aa14.74□□□□□ -0.05
RTFDC1-202ENST00000357348 RTKN2Q8IZC4 609 aa14.74□□□□□ -0.05
RTFDC1-202ENST00000357348 RTFDC1Q9BY42 306 aaPredicted RBP14.74□□□□□ -0.05
RTFDC1-202ENST00000357348 CTNNA3Q9UI47 895 aa14.74□□□□□ -0.05
RTFDC1-202ENST00000357348 MYH2Q9UKX2 1941 aa14.73□□□□□ -0.05
RTFDC1-202ENST00000357348 FAM173BQ6P4H8 233 aa14.73□□□□□ -0.05
RTFDC1-202ENST00000357348 LARGE2Q8N3Y3 721 aa14.73□□□□□ -0.05
RTFDC1-202ENST00000357348 SPATA32Q96LK8 384 aa14.73□□□□□ -0.05
RTFDC1-202ENST00000357348 AATFQ9NY61 560 aaKnown RBP eCLIP14.73□□□□□ -0.05
RTFDC1-202ENST00000357348 FOXP2O15409 715 aa14.73□□□□□ -0.05
RTFDC1-202ENST00000357348 COL9A3Q14050 684 aaPredicted RBP14.73□□□□□ -0.05
RTFDC1-202ENST00000357348 RNF20Q5VTR2 975 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms