RNA–Protein interactions for RNA: ENST00000356537.8

CCDC25-201, Transcript of coiled-coil domain containing 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC25, Length 3,626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25-201ENST00000356537 MFSD6Q6ZSS7 791 aa11.06□□□□□ -0.64
CCDC25-201ENST00000356537 C8orf76Q96K31 380 aa11.06□□□□□ -0.64
CCDC25-201ENST00000356537 NUP62CLQ9H1M0 184 aa11.06□□□□□ -0.64
CCDC25-201ENST00000356537 PCDHA7Q9UN72 937 aa11.06□□□□□ -0.64
CCDC25-201ENST00000356537 RFC4P35249 363 aa11.06□□□□□ -0.64
CCDC25-201ENST00000356537 LINC00301Q8NCQ3 95 aa11.06□□□□□ -0.64
CCDC25-201ENST00000356537 ADAMTSL1Q8N6G6 1762 aa11.06□□□□□ -0.64
CCDC25-201ENST00000356537 GNAT2P19087 354 aa11.05□□□□□ -0.64
CCDC25-201ENST00000356537 CAVIN4Q5BKX8 364 aa11.05□□□□□ -0.64
CCDC25-201ENST00000356537 MEX3CQ5U5Q3 659 aaKnown RBP11.05□□□□□ -0.64
CCDC25-201ENST00000356537 ERCC4Q92889 916 aaPredicted RBP11.05□□□□□ -0.64
CCDC25-201ENST00000356537 RTEL1Q9NZ71 1219 aa11.05□□□□□ -0.64
CCDC25-201ENST00000356537 ZBTB43O43298 467 aa11.05□□□□□ -0.64
CCDC25-201ENST00000356537 LETM1O95202 739 aaPredicted RBP11.05□□□□□ -0.64
CCDC25-201ENST00000356537 FGRP09769 529 aa11.05□□□□□ -0.64
CCDC25-201ENST00000356537 TYRO3Q06418 890 aa11.05□□□□□ -0.64
CCDC25-201ENST00000356537 DDR1Q08345 913 aa11.05□□□□□ -0.64
CCDC25-201ENST00000356537 RRP12Q5JTH9 1297 aaKnown RBP11.05□□□□□ -0.64
CCDC25-201ENST00000356537 MPNDQ8N594 471 aa11.05□□□□□ -0.64
CCDC25-201ENST00000356537 CFAP45Q9UL16 551 aa11.05□□□□□ -0.64
CCDC25-201ENST00000356537 MROH7-TTC4A0A0A0MT08 1334 aa11.05□□□□□ -0.64
CCDC25-201ENST00000356537 PDS5AQ29RF7 1337 aaKnown RBP11.05□□□□□ -0.64
CCDC25-201ENST00000356537 IFIT3O14879 490 aaKnown RBP11.05□□□□□ -0.64
CCDC25-201ENST00000356537 HIBADHP31937 336 aaKnown RBP11.05□□□□□ -0.64
CCDC25-201ENST00000356537 CRY2Q49AN0 593 aa11.05□□□□□ -0.64
CCDC25-201ENST00000356537 MYSM1Q5VVJ2 828 aa11.05□□□□□ -0.64
CCDC25-201ENST00000356537 PRDM1O75626 825 aa11.04□□□□□ -0.64
CCDC25-201ENST00000356537 WDHD1O75717 1129 aaPredicted RBP11.04□□□□□ -0.64
CCDC25-201ENST00000356537 CYP2D6P10635 497 aa11.04□□□□□ -0.64
CCDC25-201ENST00000356537 MAP3K11Q16584 847 aa11.04□□□□□ -0.64
CCDC25-201ENST00000356537 AATFQ9NY61 560 aaKnown RBP eCLIP11.04□□□□□ -0.64
CCDC25-201ENST00000356537 TRPC5Q9UL62 973 aaPredicted RBP11.04□□□□□ -0.64
CCDC25-201ENST00000356537 ZNF646O15015 1829 aaPredicted RBP11.04□□□□□ -0.64
CCDC25-201ENST00000356537 MINDY4BA8MYZ0 360 aa11.04□□□□□ -0.64
CCDC25-201ENST00000356537 NMT2O60551 498 aa11.04□□□□□ -0.64
CCDC25-201ENST00000356537 AXDND1Q5T1B0 1012 aaPredicted RBP11.04□□□□□ -0.64
CCDC25-201ENST00000356537 KRT40Q6A162 431 aa11.04□□□□□ -0.64
CCDC25-201ENST00000356537 LUZP1Q86V48 1076 aa11.04□□□□□ -0.64
CCDC25-201ENST00000356537 CCAR1Q8IX12 1150 aaKnown RBP11.04□□□□□ -0.64
CCDC25-201ENST00000356537 ENAHQ8N8S7 591 aaPredicted RBP11.04□□□□□ -0.64
CCDC25-201ENST00000356537 MAP3K14Q99558 947 aa11.04□□□□□ -0.64
CCDC25-201ENST00000356537 QTRT2Q9H974 415 aaKnown RBP11.04□□□□□ -0.64
CCDC25-201ENST00000356537 MKRN1Q9UHC7 482 aaKnown RBP11.04□□□□□ -0.64
CCDC25-201ENST00000356537 TRIM37O94972 964 aa11.04□□□□□ -0.64
CCDC25-201ENST00000356537 GRAPQ13588 217 aa11.04□□□□□ -0.64
CCDC25-201ENST00000356537 VPS37DQ86XT2 251 aa11.04□□□□□ -0.64
CCDC25-201ENST00000356537 FMR1NBQ8N0W7 255 aaPredicted RBP11.04□□□□□ -0.64
CCDC25-201ENST00000356537 GRAPLQ8TC17 118 aaPredicted RBP11.04□□□□□ -0.64
CCDC25-201ENST00000356537 BICD2Q8TD16 824 aa11.04□□□□□ -0.64
CCDC25-201ENST00000356537 ALG1Q9BT22 464 aa11.04□□□□□ -0.64
CCDC25-201ENST00000356537 TNMDQ9H2S6 317 aa11.04□□□□□ -0.64
CCDC25-201ENST00000356537 DCP1AQ9NPI6 582 aaPredicted RBP11.04□□□□□ -0.64
CCDC25-201ENST00000356537 NOL7Q9UMY1 257 aaKnown RBP11.04□□□□□ -0.64
CCDC25-201ENST00000356537 FUT2Q10981 343 aa11.03□□□□□ -0.64
CCDC25-201ENST00000356537 TRIM44Q96DX7 344 aaPredicted RBP11.03□□□□□ -0.64
CCDC25-201ENST00000356537 BRIP1Q9BX63 1249 aa11.03□□□□□ -0.64
CCDC25-201ENST00000356537 KRT23Q9C075 422 aa11.03□□□□□ -0.64
CCDC25-201ENST00000356537 CNNM2Q9H8M5 875 aa11.03□□□□□ -0.64
CCDC25-201ENST00000356537 POLR3EQ9NVU0 708 aa11.03□□□□□ -0.64
CCDC25-201ENST00000356537 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.03□□□□□ -0.64
CCDC25-201ENST00000356537 TNKSO95271 1327 aa11.03□□□□□ -0.64
CCDC25-201ENST00000356537 GOLGA8AA7E2F4 631 aa11.03□□□□□ -0.64
CCDC25-201ENST00000356537 CPLX1O14810 134 aa11.03□□□□□ -0.64
CCDC25-201ENST00000356537 DHX16O60231 1041 aaKnown RBP11.03□□□□□ -0.64
CCDC25-201ENST00000356537 ADCY5O95622 1261 aa11.03□□□□□ -0.64
CCDC25-201ENST00000356537 NDUFA8P51970 172 aa11.03□□□□□ -0.64
CCDC25-201ENST00000356537 PTPAQ15257 358 aa11.03□□□□□ -0.64
CCDC25-201ENST00000356537 ANO6Q4KMQ2 910 aa11.03□□□□□ -0.64
CCDC25-201ENST00000356537 ZSCAN30Q86W11 494 aa11.03□□□□□ -0.64
CCDC25-201ENST00000356537 CNBD1Q8NA66 436 aa11.03□□□□□ -0.64
CCDC25-201ENST00000356537 DDX19AQ9NUU7 478 aaKnown RBP11.03□□□□□ -0.64
CCDC25-201ENST00000356537 GNL3LQ9NVN8 582 aaKnown RBP11.03□□□□□ -0.64
CCDC25-201ENST00000356537 SEMA3EO15041 775 aa11.03□□□□□ -0.64
CCDC25-201ENST00000356537 FMNL1O95466 1100 aaPredicted RBP11.03□□□□□ -0.64
CCDC25-201ENST00000356537 U2AF2P26368 475 aaKnown RBP eCLIP11.03□□□□□ -0.64
CCDC25-201ENST00000356537 GPSM2P81274 684 aa11.03□□□□□ -0.64
CCDC25-201ENST00000356537 CHAF1AQ13111 956 aaPredicted RBP11.03□□□□□ -0.64
CCDC25-201ENST00000356537 UVSSAQ2YD98 709 aa11.03□□□□□ -0.64
CCDC25-201ENST00000356537 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.02□□□□□ -0.64
CCDC25-201ENST00000356537 A0A1B0GVL5 298 aa11.02□□□□□ -0.64
CCDC25-201ENST00000356537 USP17L12C9JPN9 530 aa11.02□□□□□ -0.64
CCDC25-201ENST00000356537 USP17L21D6R901 530 aa11.02□□□□□ -0.64
CCDC25-201ENST00000356537 TOB1P50616 345 aaPredicted RBP11.02□□□□□ -0.64
CCDC25-201ENST00000356537 C11orf57Q6ZUT1 292 aaPredicted RBP11.02□□□□□ -0.64
CCDC25-201ENST00000356537 NACAP1Q9BZK3 213 aa11.02□□□□□ -0.64
CCDC25-201ENST00000356537 ANKRD2Q9GZV1 360 aa11.02□□□□□ -0.64
CCDC25-201ENST00000356537 CBX8Q9HC52 389 aa11.02□□□□□ -0.64
CCDC25-201ENST00000356537 TAOK2Q9UL54 1235 aa11.02□□□□□ -0.64
CCDC25-201ENST00000356537 SLC12A7Q9Y666 1083 aa11.02□□□□□ -0.64
CCDC25-201ENST00000356537 ADAMTS3O15072 1205 aa11.02□□□□□ -0.65
CCDC25-201ENST00000356537 ZBTB22O15209 634 aa11.02□□□□□ -0.65
CCDC25-201ENST00000356537 IFNAR1P17181 557 aa11.02□□□□□ -0.65
CCDC25-201ENST00000356537 HS1BP3Q53T59 392 aa11.02□□□□□ -0.65
CCDC25-201ENST00000356537 ATL3Q6DD88 541 aa11.02□□□□□ -0.65
CCDC25-201ENST00000356537 NFXL1Q6ZNB6 911 aa11.02□□□□□ -0.65
CCDC25-201ENST00000356537 CCDC82Q8N4S0 544 aa11.02□□□□□ -0.65
CCDC25-201ENST00000356537 MYH1P12882 1939 aa11.02□□□□□ -0.65
CCDC25-201ENST00000356537 STK36Q9NRP7 1315 aa11.02□□□□□ -0.65
CCDC25-201ENST00000356537 POLRMTO00411 1230 aaKnown RBP11.02□□□□□ -0.65
CCDC25-201ENST00000356537 CCDC192P0DO97 292 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms