RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 DENND2CQ68D51 928 aa12.3□□□□□ -0.44
GTF3C1-201ENST00000356183 KIFAP3Q92845 792 aa12.3□□□□□ -0.44
GTF3C1-201ENST00000356183 ASIC3Q9UHC3 531 aa12.3□□□□□ -0.44
GTF3C1-201ENST00000356183 CAMSAP2Q08AD1 1489 aa12.3□□□□□ -0.44
GTF3C1-201ENST00000356183 C6orf50Q9HD87 102 aa12.3□□□□□ -0.44
GTF3C1-201ENST00000356183 ECM2O94769 699 aaPredicted RBP12.3□□□□□ -0.44
GTF3C1-201ENST00000356183 MAN1A1P33908 653 aa12.3□□□□□ -0.44
GTF3C1-201ENST00000356183 USP26Q9BXU7 913 aa12.3□□□□□ -0.44
GTF3C1-201ENST00000356183 TTF2Q9UNY4 1162 aaKnown RBP12.3□□□□□ -0.44
GTF3C1-201ENST00000356183 GSTO1P78417 241 aa12.3□□□□□ -0.44
GTF3C1-201ENST00000356183 RUFY4Q6ZNE9 571 aa12.3□□□□□ -0.44
GTF3C1-201ENST00000356183 SND1Q7KZF4 910 aaKnown RBP eCLIP12.3□□□□□ -0.441e-7■■■□□ 16.2
GTF3C1-201ENST00000356183 PDCD7Q8N8D1 485 aaKnown RBP12.3□□□□□ -0.44
GTF3C1-201ENST00000356183 NOX5Q96PH1 765 aa12.3□□□□□ -0.44
GTF3C1-201ENST00000356183 TNNI2P48788 182 aa12.29□□□□□ -0.44
GTF3C1-201ENST00000356183 HVCN1Q96D96 273 aa12.29□□□□□ -0.44
GTF3C1-201ENST00000356183 AFG3L2Q9Y4W6 797 aa12.29□□□□□ -0.44
GTF3C1-201ENST00000356183 KRT15P19012 456 aa12.29□□□□□ -0.44
GTF3C1-201ENST00000356183 TMTC2Q8N394 836 aa12.29□□□□□ -0.44
GTF3C1-201ENST00000356183 TSC1Q92574 1164 aa12.29□□□□□ -0.44
GTF3C1-201ENST00000356183 ARHGEF11O15085 1522 aa12.29□□□□□ -0.44
GTF3C1-201ENST00000356183 CEP104O60308 925 aa12.29□□□□□ -0.44
GTF3C1-201ENST00000356183 RNF34Q969K3 372 aa12.29□□□□□ -0.44
GTF3C1-201ENST00000356183 SYNRGQ9UMZ2 1314 aa12.29□□□□□ -0.44
GTF3C1-201ENST00000356183 LIG3P49916 1009 aa12.29□□□□□ -0.44
GTF3C1-201ENST00000356183 CASC4Q6P4E1 433 aa12.29□□□□□ -0.44
GTF3C1-201ENST00000356183 NME9Q86XW9 330 aa12.29□□□□□ -0.44
GTF3C1-201ENST00000356183 SLC52A1Q9NWF4 448 aa12.29□□□□□ -0.44
GTF3C1-201ENST00000356183 RTL9Q8NET4 1388 aa12.29□□□□□ -0.44
GTF3C1-201ENST00000356183 RALGAPBQ86X10 1494 aa12.29□□□□□ -0.44
GTF3C1-201ENST00000356183 PIK3R4Q99570 1358 aa12.29□□□□□ -0.44
GTF3C1-201ENST00000356183 PI4KAP2A4QPH2 592 aa12.29□□□□□ -0.44
GTF3C1-201ENST00000356183 TRAF5O00463 557 aa12.29□□□□□ -0.44
GTF3C1-201ENST00000356183 DAPK3O43293 454 aa12.29□□□□□ -0.44
GTF3C1-201ENST00000356183 HARSP12081 509 aaKnown RBP12.29□□□□□ -0.44
GTF3C1-201ENST00000356183 INPP1P49441 399 aa12.29□□□□□ -0.44
GTF3C1-201ENST00000356183 ZNF75DP51815 510 aa12.29□□□□□ -0.44
GTF3C1-201ENST00000356183 NXNQ6DKJ4 435 aa12.29□□□□□ -0.44
GTF3C1-201ENST00000356183 PI4KAP1Q8N8J0 262 aa12.29□□□□□ -0.44
GTF3C1-201ENST00000356183 ABTB1Q969K4 478 aaPredicted RBP12.29□□□□□ -0.44
GTF3C1-201ENST00000356183 EMILIN1Q9Y6C2 1016 aa12.29□□□□□ -0.44
GTF3C1-201ENST00000356183 FANCCQ00597 558 aa12.28□□□□□ -0.44
GTF3C1-201ENST00000356183 SP4Q02446 784 aa12.28□□□□□ -0.44
GTF3C1-201ENST00000356183 CREB3L3Q68CJ9 461 aa12.28□□□□□ -0.44
GTF3C1-201ENST00000356183 HS2ST1Q7LGA3 356 aa12.28□□□□□ -0.44
GTF3C1-201ENST00000356183 ANKRD44Q8N8A2 993 aa12.28□□□□□ -0.44
GTF3C1-201ENST00000356183 ZKSCAN3Q9BRR0 538 aa12.28□□□□□ -0.44
GTF3C1-201ENST00000356183 CBX8Q9HC52 389 aa12.28□□□□□ -0.44
GTF3C1-201ENST00000356183 LDHCP07864 332 aa12.28□□□□□ -0.44
GTF3C1-201ENST00000356183 ATP1A2P50993 1020 aa12.28□□□□□ -0.44
GTF3C1-201ENST00000356183 PKD2L1Q9P0L9 805 aa12.28□□□□□ -0.44
GTF3C1-201ENST00000356183 TNNQ9UQP3 1299 aa12.28□□□□□ -0.44
GTF3C1-201ENST00000356183 MAGEB6P1A0A0J9YX57 407 aa12.28□□□□□ -0.44
GTF3C1-201ENST00000356183 SPDYE3A6NKU9 549 aa12.28□□□□□ -0.44
GTF3C1-201ENST00000356183 TUBB2AQ13885 445 aa12.28□□□□□ -0.44
GTF3C1-201ENST00000356183 SNCBQ16143 134 aa12.28□□□□□ -0.44
GTF3C1-201ENST00000356183 ZMAT2Q96NC0 199 aaKnown RBP12.28□□□□□ -0.44
GTF3C1-201ENST00000356183 CDC5LQ99459 802 aaKnown RBP12.28□□□□□ -0.44
GTF3C1-201ENST00000356183 TUBB2BQ9BVA1 445 aa12.28□□□□□ -0.44
GTF3C1-201ENST00000356183 RASSF2P50749 326 aa12.28□□□□□ -0.44
GTF3C1-201ENST00000356183 TBC1D8BQ0IIM8 1120 aa12.28□□□□□ -0.44
GTF3C1-201ENST00000356183 WDR44Q5JSH3 913 aa12.28□□□□□ -0.44
GTF3C1-201ENST00000356183 SV2BQ7L1I2 683 aa12.28□□□□□ -0.44
GTF3C1-201ENST00000356183 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.28□□□□□ -0.44
GTF3C1-201ENST00000356183 ANXA1P04083 346 aa12.28□□□□□ -0.44
GTF3C1-201ENST00000356183 MEIS3Q99687 375 aa12.28□□□□□ -0.44
GTF3C1-201ENST00000356183 PDE4DQ08499 809 aa12.27□□□□□ -0.44
GTF3C1-201ENST00000356183 TRIM14Q14142 442 aa12.27□□□□□ -0.44
GTF3C1-201ENST00000356183 GIPC1O14908 333 aa12.27□□□□□ -0.44
GTF3C1-201ENST00000356183 UQCRFS1P1P0C7P4 283 aa12.27□□□□□ -0.44
GTF3C1-201ENST00000356183 VPS41P49754 854 aa12.27□□□□□ -0.44
GTF3C1-201ENST00000356183 PAK2Q13177 524 aa12.27□□□□□ -0.44
GTF3C1-201ENST00000356183 WAPLQ7Z5K2 1190 aa12.27□□□□□ -0.44
GTF3C1-201ENST00000356183 STAG1Q8WVM7 1258 aa12.27□□□□□ -0.44
GTF3C1-201ENST00000356183 VPS37BQ9H9H4 285 aa12.27□□□□□ -0.44
GTF3C1-201ENST00000356183 CCDC13Q8IYE1 715 aa12.27□□□□□ -0.45
GTF3C1-201ENST00000356183 PDZD8Q8NEN9 1154 aa12.27□□□□□ -0.45
GTF3C1-201ENST00000356183 CUL7Q14999 1698 aa12.27□□□□□ -0.45
GTF3C1-201ENST00000356183 PPFIA2O75334 1257 aa12.27□□□□□ -0.45
GTF3C1-201ENST00000356183 ZBTB40Q9NUA8 1239 aa12.27□□□□□ -0.45
GTF3C1-201ENST00000356183 NSD2O96028 1365 aa12.27□□□□□ -0.45
GTF3C1-201ENST00000356183 A6NNZ2 444 aa12.27□□□□□ -0.45
GTF3C1-201ENST00000356183 ATP6V1AP38606 617 aa12.27□□□□□ -0.45
GTF3C1-201ENST00000356183 MTX1Q13505 466 aa12.27□□□□□ -0.45
GTF3C1-201ENST00000356183 TUBB8Q3ZCM7 444 aa12.27□□□□□ -0.45
GTF3C1-201ENST00000356183 AMOTQ4VCS5 1084 aa12.27□□□□□ -0.45
GTF3C1-201ENST00000356183 BIVM-ERCC5R4GMW8 1640 aa12.27□□□□□ -0.45
GTF3C1-201ENST00000356183 CLTAP09496 248 aa12.26□□□□□ -0.45
GTF3C1-201ENST00000356183 BIRC3Q13489 604 aa12.26□□□□□ -0.45
GTF3C1-201ENST00000356183 ANKRD20A3Q5VUR7 823 aa12.26□□□□□ -0.45
GTF3C1-201ENST00000356183 PRPF31Q8WWY3 499 aaKnown RBP12.26□□□□□ -0.45
GTF3C1-201ENST00000356183 PAG1Q9NWQ8 432 aa12.26□□□□□ -0.45
GTF3C1-201ENST00000356183 MYO1AQ9UBC5 1043 aa12.26□□□□□ -0.45
GTF3C1-201ENST00000356183 STX2P32856 288 aa12.26□□□□□ -0.45
GTF3C1-201ENST00000356183 GRM1Q13255 1194 aa12.26□□□□□ -0.45
GTF3C1-201ENST00000356183 CCDC105Q8IYK2 499 aa12.26□□□□□ -0.45
GTF3C1-201ENST00000356183 KAT6BQ8WYB5 2073 aa12.26□□□□□ -0.45
GTF3C1-201ENST00000356183 STX10O60499 249 aa12.26□□□□□ -0.45
GTF3C1-201ENST00000356183 CCNT1O60563 726 aaKnown RBP12.26□□□□□ -0.45
GTF3C1-201ENST00000356183 NCBP1Q09161 790 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms