RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 HOOK2Q96ED9 719 aa18.64■□□□□ 0.57
TRIM13-201ENST00000356017 TMEM39BQ9GZU3 492 aa18.64■□□□□ 0.57
TRIM13-201ENST00000356017 OSBPL5Q9H0X9 879 aaPredicted RBP18.64■□□□□ 0.57
TRIM13-201ENST00000356017 DHX36Q9H2U1 1008 aaKnown RBP18.64■□□□□ 0.57
TRIM13-201ENST00000356017 DDX4Q9NQI0 724 aaKnown RBP18.64■□□□□ 0.57
TRIM13-201ENST00000356017 FLT1P17948 1338 aa18.64■□□□□ 0.57
TRIM13-201ENST00000356017 RAD50Q92878 1312 aa18.64■□□□□ 0.57
TRIM13-201ENST00000356017 CNTNAP1P78357 1384 aa18.64■□□□□ 0.57
TRIM13-201ENST00000356017 RPAP1Q9BWH6 1393 aaPredicted RBP18.64■□□□□ 0.57
TRIM13-201ENST00000356017 CDC45O75419 566 aa18.63■□□□□ 0.57
TRIM13-201ENST00000356017 NF2P35240 595 aa18.63■□□□□ 0.57
TRIM13-201ENST00000356017 GIMAP6Q6P9H5 292 aa18.63■□□□□ 0.57
TRIM13-201ENST00000356017 MAPKAPK5Q8IW41 473 aa18.63■□□□□ 0.57
TRIM13-201ENST00000356017 ZSCAN29Q8IWY8 852 aaPredicted RBP18.63■□□□□ 0.57
TRIM13-201ENST00000356017 AK9Q5TCS8 1911 aa18.63■□□□□ 0.57
TRIM13-201ENST00000356017 PATL2C9JE40 543 aaKnown RBP18.63■□□□□ 0.57
TRIM13-201ENST00000356017 SDR42E1Q8WUS8 393 aa18.63■□□□□ 0.57
TRIM13-201ENST00000356017 NACAP1Q9BZK3 213 aa18.63■□□□□ 0.57
TRIM13-201ENST00000356017 CCDC171Q6TFL3 1326 aa18.63■□□□□ 0.57
TRIM13-201ENST00000356017 PRKAB2O43741 272 aa18.62■□□□□ 0.57
TRIM13-201ENST00000356017 APPP05067 770 aa18.62■□□□□ 0.57
TRIM13-201ENST00000356017 CDCA5Q96FF9 252 aa18.62■□□□□ 0.57
TRIM13-201ENST00000356017 DCP1AQ9NPI6 582 aaPredicted RBP18.62■□□□□ 0.57
TRIM13-201ENST00000356017 MKRN1Q9UHC7 482 aaKnown RBP18.62■□□□□ 0.57
TRIM13-201ENST00000356017 COL2A1P02458 1487 aaPredicted RBP18.62■□□□□ 0.57
TRIM13-201ENST00000356017 CCDC129Q6ZRS4 1044 aa18.61■□□□□ 0.57
TRIM13-201ENST00000356017 ZFPM1Q8IX07 1006 aa18.61■□□□□ 0.57
TRIM13-201ENST00000356017 AMOTL1Q8IY63 956 aa18.61■□□□□ 0.57
TRIM13-201ENST00000356017 TEPSINQ96N21 525 aa18.61■□□□□ 0.57
TRIM13-201ENST00000356017 MCM9Q9NXL9 1143 aa18.61■□□□□ 0.57
TRIM13-201ENST00000356017 ATRNL1Q5VV63 1379 aa18.61■□□□□ 0.57
TRIM13-201ENST00000356017 PASKQ96RG2 1323 aa18.6■□□□□ 0.57
TRIM13-201ENST00000356017 GSG1L2A8MUP6 293 aa18.6■□□□□ 0.57
TRIM13-201ENST00000356017 TRAF5O00463 557 aa18.6■□□□□ 0.57
TRIM13-201ENST00000356017 PRAMEF18Q5VWM3 479 aa18.6■□□□□ 0.57
TRIM13-201ENST00000356017 TTC6Q86TZ1 520 aa18.6■□□□□ 0.57
TRIM13-201ENST00000356017 ZNF589Q86UQ0 364 aaPredicted RBP18.6■□□□□ 0.57
TRIM13-201ENST00000356017 CSRNP1Q96S65 589 aa18.6■□□□□ 0.57
TRIM13-201ENST00000356017 SGSM2O43147 1006 aa18.6■□□□□ 0.57
TRIM13-201ENST00000356017 HLA-DOAP06340 250 aa18.6■□□□□ 0.57
TRIM13-201ENST00000356017 NBPF12Q5TAG4 269 aaPredicted RBP18.6■□□□□ 0.57
TRIM13-201ENST00000356017 PI4KBQ9UBF8 816 aa18.6■□□□□ 0.57
TRIM13-201ENST00000356017 PALD1Q9ULE6 856 aa18.6■□□□□ 0.57
TRIM13-201ENST00000356017 DDTLA6NHG4 134 aaPredicted RBP18.59■□□□□ 0.57
TRIM13-201ENST00000356017 HSPD1P10809 573 aaKnown RBP18.59■□□□□ 0.57
TRIM13-201ENST00000356017 IFNL3Q8IZI9 196 aa18.59■□□□□ 0.57
TRIM13-201ENST00000356017 ARPP21Q9UBL0 812 aaPredicted RBP18.59■□□□□ 0.57
TRIM13-201ENST00000356017 PPP1R12BO60237 982 aaPredicted RBP18.58■□□□□ 0.56
TRIM13-201ENST00000356017 POLR3DP05423 398 aaPredicted RBP18.58■□□□□ 0.56
TRIM13-201ENST00000356017 TDO2P48775 406 aa18.58■□□□□ 0.56
TRIM13-201ENST00000356017 DCAF15Q66K64 600 aa18.58■□□□□ 0.56
TRIM13-201ENST00000356017 DLK2Q6UY11 383 aa18.58■□□□□ 0.56
TRIM13-201ENST00000356017 SH3BP5LQ7L8J4 393 aa18.58■□□□□ 0.56
TRIM13-201ENST00000356017 FOXP4Q8IVH2 680 aaPredicted RBP18.58■□□□□ 0.56
TRIM13-201ENST00000356017 NAPBQ9H115 298 aa18.58■□□□□ 0.56
TRIM13-201ENST00000356017 ZNF408Q9H9D4 720 aa18.58■□□□□ 0.56
TRIM13-201ENST00000356017 SAP30BPQ9UHR5 308 aaKnown RBP18.58■□□□□ 0.56
TRIM13-201ENST00000356017 TAOK2Q9UL54 1235 aa18.58■□□□□ 0.56
TRIM13-201ENST00000356017 POLR2AP24928 1970 aaKnown RBP18.58■□□□□ 0.56
TRIM13-201ENST00000356017 CELF2O95319 508 aaKnown RBP18.57■□□□□ 0.56
TRIM13-201ENST00000356017 FKBP1BP68106 108 aa18.57■□□□□ 0.56
TRIM13-201ENST00000356017 KIAA1211Q6ZU35 1233 aa18.57■□□□□ 0.56
TRIM13-201ENST00000356017 ESYT1Q9BSJ8 1104 aa18.57■□□□□ 0.56
TRIM13-201ENST00000356017 DSCC1Q9BVC3 393 aa18.57■□□□□ 0.56
TRIM13-201ENST00000356017 USP17L12C9JPN9 530 aa18.56■□□□□ 0.56
TRIM13-201ENST00000356017 USP17L21D6R901 530 aa18.56■□□□□ 0.56
TRIM13-201ENST00000356017 ALX1Q15699 326 aa18.56■□□□□ 0.56
TRIM13-201ENST00000356017 SBK1Q52WX2 424 aa18.56■□□□□ 0.56
TRIM13-201ENST00000356017 VPS53Q5VIR6 699 aa18.56■□□□□ 0.56
TRIM13-201ENST00000356017 HERC5Q9UII4 1024 aaKnown RBP18.56■□□□□ 0.56
TRIM13-201ENST00000356017 TBC1D12O60347 775 aa18.56■□□□□ 0.56
TRIM13-201ENST00000356017 FMR1Q06787 632 aaKnown RBP eCLIP18.56■□□□□ 0.56
TRIM13-201ENST00000356017 CTR9Q6PD62 1173 aa18.56■□□□□ 0.56
TRIM13-201ENST00000356017 CDAN1Q8IWY9 1227 aa18.56■□□□□ 0.56
TRIM13-201ENST00000356017 C2orf69Q8N8R5 385 aa18.56■□□□□ 0.56
TRIM13-201ENST00000356017 TRIM34Q9BYJ4 488 aa18.56■□□□□ 0.56
TRIM13-201ENST00000356017 EHD4Q9H223 541 aa18.56■□□□□ 0.56
TRIM13-201ENST00000356017 EPB41L4AQ9HCS5 686 aaPredicted RBP18.56■□□□□ 0.56
TRIM13-201ENST00000356017 ZMYM6O95789 1325 aa18.55■□□□□ 0.56
TRIM13-201ENST00000356017 FOCADQ5VW36 1801 aa18.55■□□□□ 0.56
TRIM13-201ENST00000356017 MAP3K10Q02779 954 aa18.55■□□□□ 0.56
TRIM13-201ENST00000356017 C12orf60Q5U649 245 aa18.55■□□□□ 0.56
TRIM13-201ENST00000356017 CST9Q5W186 159 aa18.55■□□□□ 0.56
TRIM13-201ENST00000356017 ARMC9Q7Z3E5 817 aa18.55■□□□□ 0.56
TRIM13-201ENST00000356017 CRACR2BQ8N4Y2 399 aaPredicted RBP18.55■□□□□ 0.56
TRIM13-201ENST00000356017 IL25Q9H293 177 aa18.55■□□□□ 0.56
TRIM13-201ENST00000356017 GBA2Q9HCG7 927 aaPredicted RBP18.55■□□□□ 0.56
TRIM13-201ENST00000356017 SERPINB13Q9UIV8 391 aa18.55■□□□□ 0.56
TRIM13-201ENST00000356017 FOXP2O15409 715 aa18.54■□□□□ 0.56
TRIM13-201ENST00000356017 FGAP02671 866 aa18.54■□□□□ 0.56
TRIM13-201ENST00000356017 TTLL12Q14166 644 aaPredicted RBP18.54■□□□□ 0.56
TRIM13-201ENST00000356017 MIGA2Q7L4E1 593 aa18.54■□□□□ 0.56
TRIM13-201ENST00000356017 METTL16Q86W50 562 aaKnown RBP18.54■□□□□ 0.56
TRIM13-201ENST00000356017 ZNF341Q9BYN7 854 aa18.54■□□□□ 0.56
TRIM13-201ENST00000356017 CTNNA3Q9UI47 895 aa18.54■□□□□ 0.56
TRIM13-201ENST00000356017 CDK5RAP2Q96SN8 1893 aa18.54■□□□□ 0.56
TRIM13-201ENST00000356017 TMEM88BA6NKF7 163 aa18.53■□□□□ 0.56
TRIM13-201ENST00000356017 EIF5BO60841 1220 aaKnown RBP18.53■□□□□ 0.56
TRIM13-201ENST00000356017 IREB2P48200 963 aaKnown RBP18.53■□□□□ 0.56
TRIM13-201ENST00000356017 PLCD1P51178 756 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms