RNA–Protein interactions for RNA: ENST00000355633.5

HOXA1-202, Transcript of homeobox A1, humanhuman

TSL 1 (best) BASIC

Gene HOXA1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-202ENST00000355633 TEX11Q8IYF3 940 aa16.1■□□□□ 0.17
HOXA1-202ENST00000355633 TGFBRAP1Q8WUH2 860 aa16.1■□□□□ 0.17
HOXA1-202ENST00000355633 BRF1Q92994 677 aa16.1■□□□□ 0.17
HOXA1-202ENST00000355633 AGXT2Q9BYV1 514 aa16.1■□□□□ 0.17
HOXA1-202ENST00000355633 KRT23Q9C075 422 aa16.1■□□□□ 0.17
HOXA1-202ENST00000355633 CWC22Q9HCG8 908 aaKnown RBP16.1■□□□□ 0.17
HOXA1-202ENST00000355633 MCM9Q9NXL9 1143 aa16.1■□□□□ 0.17
HOXA1-202ENST00000355633 COL4A5P29400 1685 aa16.1■□□□□ 0.17
HOXA1-202ENST00000355633 NAV1Q8NEY1 1877 aa16.1■□□□□ 0.17
HOXA1-202ENST00000355633 ARFGEF1Q9Y6D6 1849 aa16.1■□□□□ 0.17
HOXA1-202ENST00000355633 ME3Q16798 604 aa16.09■□□□□ 0.17
HOXA1-202ENST00000355633 SBK1Q52WX2 424 aa16.09■□□□□ 0.17
HOXA1-202ENST00000355633 FBXL16Q8N461 479 aa16.09■□□□□ 0.17
HOXA1-202ENST00000355633 MKRN1Q9UHC7 482 aaKnown RBP16.09■□□□□ 0.17
HOXA1-202ENST00000355633 ADAMTSL1Q8N6G6 1762 aa16.09■□□□□ 0.17
HOXA1-202ENST00000355633 CYP2D7A0A087X1C5 515 aa16.09■□□□□ 0.17
HOXA1-202ENST00000355633 NFKBIEO00221 500 aa16.09■□□□□ 0.17
HOXA1-202ENST00000355633 CRKP46108 304 aa16.09■□□□□ 0.17
HOXA1-202ENST00000355633 ANTXR2P58335 489 aa16.09■□□□□ 0.17
HOXA1-202ENST00000355633 STK11IPQ8N1F8 1099 aa16.09■□□□□ 0.17
HOXA1-202ENST00000355633 INCENPQ9NQS7 918 aa16.09■□□□□ 0.17
HOXA1-202ENST00000355633 TOMM22Q9NS69 142 aa16.09■□□□□ 0.17
HOXA1-202ENST00000355633 CIZ1Q9ULV3 898 aaPredicted RBP16.09■□□□□ 0.17
HOXA1-202ENST00000355633 TACC3Q9Y6A5 838 aa16.09■□□□□ 0.17
HOXA1-202ENST00000355633 HDLBPQ00341 1268 aaKnown RBP16.08■□□□□ 0.16
HOXA1-202ENST00000355633 RRP12Q5JTH9 1297 aaKnown RBP16.08■□□□□ 0.16
HOXA1-202ENST00000355633 MRIQ9BWK5 157 aa16.08■□□□□ 0.16
HOXA1-202ENST00000355633 ZNRF3Q9ULT6 936 aa16.08■□□□□ 0.16
HOXA1-202ENST00000355633 USP17L8P0C7I0 530 aa16.07■□□□□ 0.16
HOXA1-202ENST00000355633 CYB5R4Q7L1T6 521 aa16.07■□□□□ 0.16
HOXA1-202ENST00000355633 MAPKAPK5Q8IW41 473 aa16.07■□□□□ 0.16
HOXA1-202ENST00000355633 CCDC83Q8IWF9 413 aa16.07■□□□□ 0.16
HOXA1-202ENST00000355633 AMOTL1Q8IY63 956 aa16.07■□□□□ 0.16
HOXA1-202ENST00000355633 MYO3BQ8WXR4 1341 aa16.07■□□□□ 0.16
HOXA1-202ENST00000355633 FOCADQ5VW36 1801 aa16.07■□□□□ 0.16
HOXA1-202ENST00000355633 SMIM22K7EJ46 135 aa16.07■□□□□ 0.16
HOXA1-202ENST00000355633 KDM4AO75164 1064 aa16.07■□□□□ 0.16
HOXA1-202ENST00000355633 RAD17O75943 681 aa16.07■□□□□ 0.16
HOXA1-202ENST00000355633 SLC3A2P08195 630 aaKnown RBP16.07■□□□□ 0.16
HOXA1-202ENST00000355633 PCP11498 1178 aaKnown RBP16.07■□□□□ 0.16
HOXA1-202ENST00000355633 RSBN1LQ6PCB5 846 aaPredicted RBP16.07■□□□□ 0.16
HOXA1-202ENST00000355633 NKX2-3Q8TAU0 364 aa16.07■□□□□ 0.16
HOXA1-202ENST00000355633 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.07■□□□□ 0.16
HOXA1-202ENST00000355633 LTBP3Q9NS15 1303 aa16.07■□□□□ 0.16
HOXA1-202ENST00000355633 PSMD14O00487 310 aa16.06■□□□□ 0.16
HOXA1-202ENST00000355633 VIL1P09327 827 aaKnown RBP16.06■□□□□ 0.16
HOXA1-202ENST00000355633 CYP2D6P10635 497 aa16.06■□□□□ 0.16
HOXA1-202ENST00000355633 APOBRQ0VD83 1088 aa16.06■□□□□ 0.16
HOXA1-202ENST00000355633 C12orf60Q5U649 245 aa16.06■□□□□ 0.16
HOXA1-202ENST00000355633 NECAB1Q8N987 351 aa16.06■□□□□ 0.16
HOXA1-202ENST00000355633 JDP2Q8WYK2 163 aa16.06■□□□□ 0.16
HOXA1-202ENST00000355633 TMEM87BQ96K49 555 aa16.06■□□□□ 0.16
HOXA1-202ENST00000355633 ZDHHC15Q96MV8 337 aa16.06■□□□□ 0.16
HOXA1-202ENST00000355633 FHDC1Q9C0D6 1143 aaPredicted RBP16.06■□□□□ 0.16
HOXA1-202ENST00000355633 ZSWIM5Q9P217 1185 aa16.06■□□□□ 0.16
HOXA1-202ENST00000355633 FLT1P17948 1338 aa16.06■□□□□ 0.16
HOXA1-202ENST00000355633 DDX60LQ5H9U9 1706 aaKnown RBP16.06■□□□□ 0.16
HOXA1-202ENST00000355633 RBM5P52756 815 aaKnown RBP eCLIP16.06■□□□□ 0.16
HOXA1-202ENST00000355633 ST3GAL1Q11201 340 aa16.06■□□□□ 0.16
HOXA1-202ENST00000355633 STK3Q13188 491 aa16.06■□□□□ 0.16
HOXA1-202ENST00000355633 APOBEC3HQ6NTF7 200 aaKnown RBP16.06■□□□□ 0.16
HOXA1-202ENST00000355633 USP40Q9NVE5 1235 aa16.06■□□□□ 0.16
HOXA1-202ENST00000355633 SERPINA10Q9UK55 444 aa16.06■□□□□ 0.16
HOXA1-202ENST00000355633 POLR3DP05423 398 aaPredicted RBP16.05■□□□□ 0.16
HOXA1-202ENST00000355633 FGRP09769 529 aa16.05■□□□□ 0.16
HOXA1-202ENST00000355633 EVX2Q03828 476 aa16.05■□□□□ 0.16
HOXA1-202ENST00000355633 CDC42EP5Q6NZY7 148 aa16.05■□□□□ 0.16
HOXA1-202ENST00000355633 ESR2Q92731 530 aa16.05■□□□□ 0.16
HOXA1-202ENST00000355633 GPHNQ9NQX3 736 aaPredicted RBP16.05■□□□□ 0.16
HOXA1-202ENST00000355633 MYH1P12882 1939 aa16.05■□□□□ 0.16
HOXA1-202ENST00000355633 ECM29Q5VYK3 1845 aa16.05■□□□□ 0.16
HOXA1-202ENST00000355633 SH2B2O14492 632 aaPredicted RBP16.04■□□□□ 0.16
HOXA1-202ENST00000355633 EVCP57679 992 aa16.04■□□□□ 0.16
HOXA1-202ENST00000355633 SLC4A8Q2Y0W8 1093 aa16.04■□□□□ 0.16
HOXA1-202ENST00000355633 ZNF274Q96GC6 653 aaPredicted RBP16.04■□□□□ 0.16
HOXA1-202ENST00000355633 SAP30BPQ9UHR5 308 aaKnown RBP16.04■□□□□ 0.16
HOXA1-202ENST00000355633 ANGEL1Q9UNK9 670 aaKnown RBP16.04■□□□□ 0.16
HOXA1-202ENST00000355633 ROBO3Q96MS0 1386 aa16.04■□□□□ 0.16
HOXA1-202ENST00000355633 RASSF7Q02833 373 aa16.04■□□□□ 0.16
HOXA1-202ENST00000355633 PDE4BQ07343 736 aa16.04■□□□□ 0.16
HOXA1-202ENST00000355633 GTF3C6Q969F1 213 aa16.04■□□□□ 0.16
HOXA1-202ENST00000355633 NAP1L2Q9ULW6 460 aaPredicted RBP16.04■□□□□ 0.16
HOXA1-202ENST00000355633 SMC3Q9UQE7 1217 aa16.04■□□□□ 0.16
HOXA1-202ENST00000355633 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.04■□□□□ 0.16
HOXA1-202ENST00000355633 GOLGB1Q14789 3259 aaKnown RBP16.04■□□□□ 0.16
HOXA1-202ENST00000355633 IFIT3O14879 490 aaKnown RBP16.03■□□□□ 0.16
HOXA1-202ENST00000355633 ORC4O43929 436 aa16.03■□□□□ 0.16
HOXA1-202ENST00000355633 PRDM1O75626 825 aa16.03■□□□□ 0.16
HOXA1-202ENST00000355633 WDHD1O75717 1129 aaPredicted RBP16.03■□□□□ 0.16
HOXA1-202ENST00000355633 CXCL9Q07325 125 aa16.03■□□□□ 0.16
HOXA1-202ENST00000355633 PICALMQ13492 652 aa16.03■□□□□ 0.16
HOXA1-202ENST00000355633 SART3Q15020 963 aaKnown RBP16.03■□□□□ 0.16
HOXA1-202ENST00000355633 IGDCC4Q8TDY8 1250 aa16.03■□□□□ 0.16
HOXA1-202ENST00000355633 GMLQ99445 158 aa16.03■□□□□ 0.16
HOXA1-202ENST00000355633 MTA3Q9BTC8 594 aa16.03■□□□□ 0.16
HOXA1-202ENST00000355633 HDAC9Q9UKV0 1011 aa16.03■□□□□ 0.16
HOXA1-202ENST00000355633 KLF18A0A0U1RQI7 1052 aa16.02■□□□□ 0.16
HOXA1-202ENST00000355633 PFKFB2O60825 505 aa16.02■□□□□ 0.16
HOXA1-202ENST00000355633 PDIA3P30101 505 aaKnown RBP16.02■□□□□ 0.16
HOXA1-202ENST00000355633 TMEM67Q5HYA8 995 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms