RNA–Protein interactions for RNA: ENST00000350697.7

SEC13-202, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SEC13, Length 1,425 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-202ENST00000350697 FOCADQ5VW36 1801 aa16.79■□□□□ 0.28
SEC13-202ENST00000350697 GSPT1P15170 499 aaKnown RBP16.79■□□□□ 0.28
SEC13-202ENST00000350697 USP5P45974 858 aa16.79■□□□□ 0.28
SEC13-202ENST00000350697 FKBP1BP68106 108 aa16.79■□□□□ 0.28
SEC13-202ENST00000350697 ZMYM1Q5SVZ6 1142 aa16.79■□□□□ 0.28
SEC13-202ENST00000350697 CDAN1Q8IWY9 1227 aa16.79■□□□□ 0.28
SEC13-202ENST00000350697 ZFPM1Q8IX07 1006 aa16.79■□□□□ 0.28
SEC13-202ENST00000350697 OSBP2Q969R2 916 aa16.79■□□□□ 0.28
SEC13-202ENST00000350697 OSBPL5Q9H0X9 879 aaPredicted RBP16.79■□□□□ 0.28
SEC13-202ENST00000350697 ARMT1Q9H993 441 aa16.79■□□□□ 0.28
SEC13-202ENST00000350697 SKAP1Q86WV1 359 aa16.78■□□□□ 0.28
SEC13-202ENST00000350697 MAPKAPK5Q8IW41 473 aa16.78■□□□□ 0.28
SEC13-202ENST00000350697 ZSCAN29Q8IWY8 852 aaPredicted RBP16.78■□□□□ 0.28
SEC13-202ENST00000350697 COL2A1P02458 1487 aaPredicted RBP16.78■□□□□ 0.28
SEC13-202ENST00000350697 SSC5DA1L4H1 1573 aa16.78■□□□□ 0.28
SEC13-202ENST00000350697 PAPPA2Q9BXP8 1791 aa16.77■□□□□ 0.28
SEC13-202ENST00000350697 FLT1P17948 1338 aa16.77■□□□□ 0.28
SEC13-202ENST00000350697 ATRNL1Q5VV63 1379 aa16.77■□□□□ 0.27
SEC13-202ENST00000350697 PPP1R12BO60237 982 aaPredicted RBP16.77■□□□□ 0.27
SEC13-202ENST00000350697 SDSP20132 328 aa16.77■□□□□ 0.27
SEC13-202ENST00000350697 TTLL12Q14166 644 aaPredicted RBP16.77■□□□□ 0.27
SEC13-202ENST00000350697 SH3BP5LQ7L8J4 393 aa16.77■□□□□ 0.27
SEC13-202ENST00000350697 CSRNP1Q96S65 589 aa16.77■□□□□ 0.27
SEC13-202ENST00000350697 DDTLA6NHG4 134 aaPredicted RBP16.76■□□□□ 0.27
SEC13-202ENST00000350697 GPAA1O43292 621 aa16.76■□□□□ 0.27
SEC13-202ENST00000350697 ARMC9Q7Z3E5 817 aa16.76■□□□□ 0.27
SEC13-202ENST00000350697 SAPCD2Q86UD0 394 aa16.76■□□□□ 0.27
SEC13-202ENST00000350697 STRBPQ96SI9 672 aaKnown RBP16.76■□□□□ 0.27
SEC13-202ENST00000350697 DHX36Q9H2U1 1008 aaKnown RBP16.76■□□□□ 0.27
SEC13-202ENST00000350697 ABT1Q9ULW3 272 aaKnown RBP16.76■□□□□ 0.27
SEC13-202ENST00000350697 TLL2Q9Y6L7 1015 aa16.76■□□□□ 0.27
SEC13-202ENST00000350697 M0R2C6 588 aa16.75■□□□□ 0.27
SEC13-202ENST00000350697 HIP1O00291 1037 aa16.75■□□□□ 0.27
SEC13-202ENST00000350697 PRKG1Q13976 671 aa16.75■□□□□ 0.27
SEC13-202ENST00000350697 DCAF15Q66K64 600 aa16.75■□□□□ 0.27
SEC13-202ENST00000350697 SEC62Q99442 399 aaKnown RBP16.75■□□□□ 0.27
SEC13-202ENST00000350697 HELLSQ9NRZ9 838 aa16.75■□□□□ 0.27
SEC13-202ENST00000350697 ATP8A2Q9NTI2 1148 aa16.75■□□□□ 0.27
SEC13-202ENST00000350697 MKRN1Q9UHC7 482 aaKnown RBP16.75■□□□□ 0.27
SEC13-202ENST00000350697 SLC4A4Q9Y6R1 1079 aa16.75■□□□□ 0.27
SEC13-202ENST00000350697 MYH1P12882 1939 aa16.74■□□□□ 0.27
SEC13-202ENST00000350697 PRKAB2O43741 272 aa16.74■□□□□ 0.27
SEC13-202ENST00000350697 GNAT2P19087 354 aa16.74■□□□□ 0.27
SEC13-202ENST00000350697 HUNKP57058 714 aa16.74■□□□□ 0.27
SEC13-202ENST00000350697 MAP3K11Q16584 847 aa16.74■□□□□ 0.27
SEC13-202ENST00000350697 SDR42E1Q8WUS8 393 aa16.74■□□□□ 0.27
SEC13-202ENST00000350697 DCP1AQ9NPI6 582 aaPredicted RBP16.74■□□□□ 0.27
SEC13-202ENST00000350697 DIAPH3Q9NSV4 1193 aa16.74■□□□□ 0.27
SEC13-202ENST00000350697 ANGEL1Q9UNK9 670 aaKnown RBP16.74■□□□□ 0.27
SEC13-202ENST00000350697 USP2O75604 605 aaPredicted RBP16.73■□□□□ 0.27
SEC13-202ENST00000350697 IREB2P48200 963 aaKnown RBP16.73■□□□□ 0.27
SEC13-202ENST00000350697 HTRA3P83110 453 aa16.73■□□□□ 0.27
SEC13-202ENST00000350697 NMIQ13287 307 aaPredicted RBP16.73■□□□□ 0.27
SEC13-202ENST00000350697 BMP2KLQ5H9B9 411 aa16.73■□□□□ 0.27
SEC13-202ENST00000350697 MOB2Q70IA6 237 aa16.73■□□□□ 0.27
SEC13-202ENST00000350697 MIGA2Q7L4E1 593 aa16.73■□□□□ 0.27
SEC13-202ENST00000350697 NAV1Q8NEY1 1877 aa16.73■□□□□ 0.27
SEC13-202ENST00000350697 DDRGK1Q96HY6 314 aa16.73■□□□□ 0.27
SEC13-202ENST00000350697 HHIPL1Q96JK4 782 aa16.73■□□□□ 0.27
SEC13-202ENST00000350697 FAM227BQ96M60 508 aa16.73■□□□□ 0.27
SEC13-202ENST00000350697 SAP30BPQ9UHR5 308 aaKnown RBP16.73■□□□□ 0.27
SEC13-202ENST00000350697 PALD1Q9ULE6 856 aa16.73■□□□□ 0.27
SEC13-202ENST00000350697 FZD1Q9UP38 647 aa16.73■□□□□ 0.27
SEC13-202ENST00000350697 A0A0D9SFI3 127 aa16.72■□□□□ 0.27
SEC13-202ENST00000350697 RASSF10A6NK89 507 aa16.72■□□□□ 0.27
SEC13-202ENST00000350697 UBE2Q2LH0YL09 131 aa16.72■□□□□ 0.27
SEC13-202ENST00000350697 HLA-DOAP06340 250 aa16.72■□□□□ 0.27
SEC13-202ENST00000350697 MCMDC2Q4G0Z9 681 aa16.72■□□□□ 0.27
SEC13-202ENST00000350697 ZNF341Q9BYN7 854 aa16.72■□□□□ 0.27
SEC13-202ENST00000350697 MCM9Q9NXL9 1143 aa16.72■□□□□ 0.27
SEC13-202ENST00000350697 PI4KBQ9UBF8 816 aa16.72■□□□□ 0.27
SEC13-202ENST00000350697 UNCXA6NJT0 531 aa16.71■□□□□ 0.27
SEC13-202ENST00000350697 TBC1D12O60347 775 aa16.71■□□□□ 0.27
SEC13-202ENST00000350697 MAP3K10Q02779 954 aa16.71■□□□□ 0.27
SEC13-202ENST00000350697 LDLRAD1Q5T700 205 aa16.71■□□□□ 0.27
SEC13-202ENST00000350697 GIMAP6Q6P9H5 292 aa16.71■□□□□ 0.27
SEC13-202ENST00000350697 TTC6Q86TZ1 520 aa16.71■□□□□ 0.27
SEC13-202ENST00000350697 FOXP4Q8IVH2 680 aaPredicted RBP16.71■□□□□ 0.27
SEC13-202ENST00000350697 KLRG1Q96E93 195 aa16.71■□□□□ 0.27
SEC13-202ENST00000350697 DDX60LQ5H9U9 1706 aaKnown RBP16.71■□□□□ 0.27
SEC13-202ENST00000350697 BAZ2AQ9UIF9 1905 aaKnown RBP16.71■□□□□ 0.26
SEC13-202ENST00000350697 GSG1L2A8MUP6 293 aa16.7■□□□□ 0.26
SEC13-202ENST00000350697 POLR3DP05423 398 aaPredicted RBP16.7■□□□□ 0.26
SEC13-202ENST00000350697 DEFB115Q30KQ5 88 aa16.7■□□□□ 0.26
SEC13-202ENST00000350697 CWC27Q6UX04 472 aaKnown RBP16.7■□□□□ 0.26
SEC13-202ENST00000350697 CCDC129Q6ZRS4 1044 aa16.7■□□□□ 0.26
SEC13-202ENST00000350697 HERC5Q9UII4 1024 aaKnown RBP16.7■□□□□ 0.26
SEC13-202ENST00000350697 PATL2C9JE40 543 aaKnown RBP16.7■□□□□ 0.26
SEC13-202ENST00000350697 MFAP1P55081 439 aaKnown RBP16.7■□□□□ 0.26
SEC13-202ENST00000350697 MAP3K9P80192 1104 aa16.7■□□□□ 0.26
SEC13-202ENST00000350697 SLC4A8Q2Y0W8 1093 aa16.7■□□□□ 0.26
SEC13-202ENST00000350697 METTL16Q86W50 562 aaKnown RBP16.7■□□□□ 0.26
SEC13-202ENST00000350697 AMOTL1Q8IY63 956 aa16.7■□□□□ 0.26
SEC13-202ENST00000350697 ANKRD13AQ8IZ07 590 aa16.7■□□□□ 0.26
SEC13-202ENST00000350697 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.7■□□□□ 0.262e-11■□□□□ 8.9
SEC13-202ENST00000350697 WRNIP1Q96S55 665 aa16.7■□□□□ 0.26
SEC13-202ENST00000350697 NACAP1Q9BZK3 213 aa16.7■□□□□ 0.26
SEC13-202ENST00000350697 EHD4Q9H223 541 aa16.7■□□□□ 0.26
SEC13-202ENST00000350697 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.7■□□□□ 0.26
SEC13-202ENST00000350697 ZNF112Q9UJU3 913 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms