RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 PCDHA7Q9UN72 937 aa16.14■□□□□ 0.17
TRIM4-201ENST00000349062 PLEKHG2Q9H7P9 1386 aa16.14■□□□□ 0.17
TRIM4-201ENST00000349062 DYNC1I1O14576 645 aa16.13■□□□□ 0.17
TRIM4-201ENST00000349062 LETM1O95202 739 aaPredicted RBP16.13■□□□□ 0.17
TRIM4-201ENST00000349062 PPARAQ07869 468 aa16.13■□□□□ 0.17
TRIM4-201ENST00000349062 RIMBP2O15034 1052 aa16.13■□□□□ 0.17
TRIM4-201ENST00000349062 PDILTQ8N807 584 aa16.13■□□□□ 0.17
TRIM4-201ENST00000349062 FBXO18Q8NFZ0 1043 aa16.13■□□□□ 0.17
TRIM4-201ENST00000349062 CLIC6Q96NY7 704 aa16.13■□□□□ 0.17
TRIM4-201ENST00000349062 SAP30BPQ9UHR5 308 aaKnown RBP16.13■□□□□ 0.17
TRIM4-201ENST00000349062 COL16A1Q07092 1604 aaPredicted RBP16.13■□□□□ 0.17
TRIM4-201ENST00000349062 SRCAPQ6ZRS2 3230 aa16.13■□□□□ 0.17
TRIM4-201ENST00000349062 HS1BP3Q53T59 392 aa16.13■□□□□ 0.17
TRIM4-201ENST00000349062 CNBD1Q8NA66 436 aa16.13■□□□□ 0.17
TRIM4-201ENST00000349062 NARFQ9UHQ1 456 aa16.13■□□□□ 0.17
TRIM4-201ENST00000349062 MRVI1Q9Y6F6 885 aa16.13■□□□□ 0.17
TRIM4-201ENST00000349062 RPS6KA4O75676 772 aa16.12■□□□□ 0.17
TRIM4-201ENST00000349062 AKAP17AQ02040 695 aaKnown RBP16.12■□□□□ 0.17
TRIM4-201ENST00000349062 SSRP1Q08945 709 aaKnown RBP16.12■□□□□ 0.17
TRIM4-201ENST00000349062 CBX8Q9HC52 389 aa16.12■□□□□ 0.17
TRIM4-201ENST00000349062 BTBD18B2RXH4 712 aa16.12■□□□□ 0.17
TRIM4-201ENST00000349062 GOLGA6L19H0YKK7 550 aa16.12■□□□□ 0.17
TRIM4-201ENST00000349062 C6orf229H3BNL8 230 aa16.12■□□□□ 0.17
TRIM4-201ENST00000349062 MECOMQ03112 1051 aa16.12■□□□□ 0.17
TRIM4-201ENST00000349062 RTN1Q16799 776 aa16.12■□□□□ 0.17
TRIM4-201ENST00000349062 RPGRQ92834 1020 aaKnown RBP16.12■□□□□ 0.17
TRIM4-201ENST00000349062 LY9Q9HBG7 655 aa16.12■□□□□ 0.17
TRIM4-201ENST00000349062 LRRC4BQ9NT99 713 aa16.12■□□□□ 0.17
TRIM4-201ENST00000349062 BSDC1Q9NW68 430 aaPredicted RBP16.12■□□□□ 0.17
TRIM4-201ENST00000349062 NDUFA8P51970 172 aa16.11■□□□□ 0.17
TRIM4-201ENST00000349062 GJD4Q96KN9 370 aaPredicted RBP16.11■□□□□ 0.17
TRIM4-201ENST00000349062 MCM9Q9NXL9 1143 aa16.11■□□□□ 0.17
TRIM4-201ENST00000349062 LRP6O75581 1613 aa16.11■□□□□ 0.17
TRIM4-201ENST00000349062 SPTLC2O15270 562 aa16.11■□□□□ 0.17
TRIM4-201ENST00000349062 MYSM1Q5VVJ2 828 aa16.11■□□□□ 0.17
TRIM4-201ENST00000349062 IGDCC4Q8TDY8 1250 aa16.11■□□□□ 0.17
TRIM4-201ENST00000349062 DDX19AQ9NUU7 478 aaKnown RBP16.11■□□□□ 0.17
TRIM4-201ENST00000349062 PODXL2Q9NZ53 605 aa16.11■□□□□ 0.17
TRIM4-201ENST00000349062 USP5P45974 858 aa16.1■□□□□ 0.17
TRIM4-201ENST00000349062 NR5A1Q13285 461 aa16.1■□□□□ 0.17
TRIM4-201ENST00000349062 MSL1Q68DK7 614 aa16.1■□□□□ 0.17
TRIM4-201ENST00000349062 OLFM4Q6UX06 510 aa16.1■□□□□ 0.17
TRIM4-201ENST00000349062 CLEC4GQ6UXB4 293 aa16.1■□□□□ 0.17
TRIM4-201ENST00000349062 CLSTN2Q9H4D0 955 aa16.1■□□□□ 0.17
TRIM4-201ENST00000349062 QTRT2Q9H974 415 aaKnown RBP16.1■□□□□ 0.17
TRIM4-201ENST00000349062 PTPN21Q16825 1174 aa16.1■□□□□ 0.17
TRIM4-201ENST00000349062 C11orf57Q6ZUT1 292 aaPredicted RBP16.1■□□□□ 0.17
TRIM4-201ENST00000349062 ZNF804BA4D1E1 1349 aa16.1■□□□□ 0.17
TRIM4-201ENST00000349062 TNKSO95271 1327 aa16.1■□□□□ 0.17
TRIM4-201ENST00000349062 RAD21O60216 631 aa16.1■□□□□ 0.17
TRIM4-201ENST00000349062 AGXT2Q9BYV1 514 aa16.1■□□□□ 0.17
TRIM4-201ENST00000349062 USP17L8P0C7I0 530 aa16.09■□□□□ 0.17
TRIM4-201ENST00000349062 TRIM22Q8IYM9 498 aa16.09■□□□□ 0.17
TRIM4-201ENST00000349062 DYNLL2Q96FJ2 89 aa16.09■□□□□ 0.17
TRIM4-201ENST00000349062 NYXQ9GZU5 481 aa16.09■□□□□ 0.17
TRIM4-201ENST00000349062 VPS54Q9P1Q0 977 aa16.09■□□□□ 0.17
TRIM4-201ENST00000349062 NRBP1Q9UHY1 535 aa16.09■□□□□ 0.17
TRIM4-201ENST00000349062 NOLC1Q14978 699 aaKnown RBP eCLIP16.09■□□□□ 0.17
TRIM4-201ENST00000349062 FILIP1Q7Z7B0 1213 aa16.09■□□□□ 0.17
TRIM4-201ENST00000349062 FAM200AQ8TCP9 573 aa16.09■□□□□ 0.17
TRIM4-201ENST00000349062 KRT23Q9C075 422 aa16.09■□□□□ 0.17
TRIM4-201ENST00000349062 ZMYM6O95789 1325 aa16.09■□□□□ 0.17
TRIM4-201ENST00000349062 UBE4AQ14139 1066 aa16.09■□□□□ 0.17
TRIM4-201ENST00000349062 GRIK5Q16478 980 aa16.09■□□□□ 0.17
TRIM4-201ENST00000349062 KIF23Q02241 960 aaPredicted RBP16.08■□□□□ 0.17
TRIM4-201ENST00000349062 PPP4R3BQ5MIZ7 849 aa16.08■□□□□ 0.17
TRIM4-201ENST00000349062 IFIT1BQ5T764 474 aaKnown RBP16.08■□□□□ 0.17
TRIM4-201ENST00000349062 MRPS27Q92552 414 aaKnown RBP16.08■□□□□ 0.17
TRIM4-201ENST00000349062 TSPY2A6NKD2 308 aa16.08■□□□□ 0.16
TRIM4-201ENST00000349062 CDKL5O76039 1030 aa16.08■□□□□ 0.16
TRIM4-201ENST00000349062 UFL1O94874 794 aa16.08■□□□□ 0.16
TRIM4-201ENST00000349062 ANO1Q5XXA6 986 aa16.08■□□□□ 0.16
TRIM4-201ENST00000349062 ZNF654Q8IZM8 581 aa16.08■□□□□ 0.16
TRIM4-201ENST00000349062 V9GY48 417 aaPredicted RBP16.08■□□□□ 0.16
TRIM4-201ENST00000349062 COL4A1P02462 1669 aa16.08■□□□□ 0.16
TRIM4-201ENST00000349062 BCL9LQ86UU0 1499 aa16.08■□□□□ 0.16
TRIM4-201ENST00000349062 PTGS1P23219 599 aa16.07■□□□□ 0.16
TRIM4-201ENST00000349062 SAFBQ15424 915 aaKnown RBP eCLIP16.07■□□□□ 0.16
TRIM4-201ENST00000349062 SLC44A5Q8NCS7 719 aa16.07■□□□□ 0.16
TRIM4-201ENST00000349062 ESR2Q92731 530 aa16.07■□□□□ 0.16
TRIM4-201ENST00000349062 RCOR1Q9UKL0 485 aa16.07■□□□□ 0.16
TRIM4-201ENST00000349062 PRDM4Q9UKN5 801 aa16.07■□□□□ 0.16
TRIM4-201ENST00000349062 PAPPAQ13219 1627 aa16.07■□□□□ 0.16
TRIM4-201ENST00000349062 ELP1O95163 1332 aa16.07■□□□□ 0.16
TRIM4-201ENST00000349062 SF3B3Q15393 1217 aaKnown RBP16.07■□□□□ 0.16
TRIM4-201ENST00000349062 AEBP2Q6ZN18 517 aaPredicted RBP16.07■□□□□ 0.16
TRIM4-201ENST00000349062 MAPKAPK5Q8IW41 473 aa16.07■□□□□ 0.16
TRIM4-201ENST00000349062 ZNF384Q8TF68 577 aa16.07■□□□□ 0.16
TRIM4-201ENST00000349062 TMEM87BQ96K49 555 aa16.07■□□□□ 0.16
TRIM4-201ENST00000349062 FAM205CA6NFA0 338 aa16.07■□□□□ 0.16
TRIM4-201ENST00000349062 TERF1P54274 439 aa16.07■□□□□ 0.16
TRIM4-201ENST00000349062 DIS3L2Q8IYB7 885 aaKnown RBP16.07■□□□□ 0.16
TRIM4-201ENST00000349062 OXER1Q8TDS5 423 aa16.07■□□□□ 0.16
TRIM4-201ENST00000349062 ZNF512BQ96KM6 892 aaPredicted RBP16.07■□□□□ 0.16
TRIM4-201ENST00000349062 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.07■□□□□ 0.16
TRIM4-201ENST00000349062 PLEKHA8P1O95397 391 aa16.06■□□□□ 0.16
TRIM4-201ENST00000349062 AOPEPQ8N6M6 819 aa16.06■□□□□ 0.16
TRIM4-201ENST00000349062 LINC00301Q8NCQ3 95 aa16.06■□□□□ 0.16
TRIM4-201ENST00000349062 CNNM2Q9H8M5 875 aa16.06■□□□□ 0.16
TRIM4-201ENST00000349062 CABP5Q9NP86 173 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms