RNA–Protein interactions for RNA: ENST00000348264.6

CLCC1-202, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-202ENST00000348264 CENPFP49454 3210 aa16.32■□□□□ 0.2
CLCC1-202ENST00000348264 IRF6O14896 467 aa16.32■□□□□ 0.2
CLCC1-202ENST00000348264 GTF2A2P52657 109 aa16.32■□□□□ 0.2
CLCC1-202ENST00000348264 PICALMQ13492 652 aa16.32■□□□□ 0.2
CLCC1-202ENST00000348264 CCDC158Q5M9N0 1113 aa16.32■□□□□ 0.2
CLCC1-202ENST00000348264 FOCADQ5VW36 1801 aa16.32■□□□□ 0.2
CLCC1-202ENST00000348264 CCDC8Q9H0W5 538 aaPredicted RBP16.32■□□□□ 0.2
CLCC1-202ENST00000348264 DDX19BQ9UMR2 479 aa16.32■□□□□ 0.2
CLCC1-202ENST00000348264 PTPRFP10586 1907 aa16.31■□□□□ 0.2
CLCC1-202ENST00000348264 DDTLA6NHG4 134 aaPredicted RBP16.31■□□□□ 0.2
CLCC1-202ENST00000348264 SLURP2P0DP57 97 aa16.31■□□□□ 0.2
CLCC1-202ENST00000348264 GSTO1P78417 241 aa16.31■□□□□ 0.2
CLCC1-202ENST00000348264 PPIL2Q13356 520 aa16.31■□□□□ 0.2
CLCC1-202ENST00000348264 OTUD7BQ6GQQ9 843 aa16.31■□□□□ 0.2
CLCC1-202ENST00000348264 FAM43AQ8N2R8 423 aa16.31■□□□□ 0.2
CLCC1-202ENST00000348264 ZNF512BQ96KM6 892 aaPredicted RBP16.31■□□□□ 0.2
CLCC1-202ENST00000348264 ZBTB40Q9NUA8 1239 aa16.31■□□□□ 0.2
CLCC1-202ENST00000348264 LRP2BPQ9P2M1 347 aa16.31■□□□□ 0.2
CLCC1-202ENST00000348264 SIPA1L1O43166 1804 aa16.31■□□□□ 0.2
CLCC1-202ENST00000348264 PHIPQ8WWQ0 1821 aa16.31■□□□□ 0.2
CLCC1-202ENST00000348264 CYP2E1P05181 493 aaPredicted RBP16.3■□□□□ 0.2
CLCC1-202ENST00000348264 ZAP70P43403 619 aa16.3■□□□□ 0.2
CLCC1-202ENST00000348264 NOL9Q5SY16 702 aaKnown RBP16.3■□□□□ 0.2
CLCC1-202ENST00000348264 C20orf194Q5TEA3 1177 aa16.3■□□□□ 0.2
CLCC1-202ENST00000348264 ZSCAN29Q8IWY8 852 aaPredicted RBP16.3■□□□□ 0.2
CLCC1-202ENST00000348264 PHF20L1A8MW92 1017 aa16.29■□□□□ 0.2
CLCC1-202ENST00000348264 LDHCP07864 332 aa16.29■□□□□ 0.2
CLCC1-202ENST00000348264 PPATQ06203 517 aa16.29■□□□□ 0.2
CLCC1-202ENST00000348264 SNAPC2Q13487 334 aa16.29■□□□□ 0.2
CLCC1-202ENST00000348264 TAF1CQ15572 869 aaPredicted RBP16.29■□□□□ 0.2
CLCC1-202ENST00000348264 ERC1Q8IUD2 1116 aa16.29■□□□□ 0.2
CLCC1-202ENST00000348264 SIRT2Q8IXJ6 389 aa16.29■□□□□ 0.2
CLCC1-202ENST00000348264 PIH1D3Q9NQM4 214 aaKnown RBP16.29■□□□□ 0.2
CLCC1-202ENST00000348264 COL2A1P02458 1487 aaPredicted RBP16.29■□□□□ 0.2
CLCC1-202ENST00000348264 ZSWIM8A7E2V4 1837 aa16.29■□□□□ 0.2
CLCC1-202ENST00000348264 ATAD5Q96QE3 1844 aa16.29■□□□□ 0.2
CLCC1-202ENST00000348264 BTBD19C9JJ37 291 aa16.28■□□□□ 0.2
CLCC1-202ENST00000348264 CETPP11597 493 aa16.28■□□□□ 0.2
CLCC1-202ENST00000348264 PKN2Q16513 984 aaKnown RBP16.28■□□□□ 0.2
CLCC1-202ENST00000348264 NAA16Q6N069 864 aaPredicted RBP16.28■□□□□ 0.2
CLCC1-202ENST00000348264 ADGRA1Q86SQ6 560 aa16.28■□□□□ 0.2
CLCC1-202ENST00000348264 AACSQ86V21 672 aa16.28■□□□□ 0.2
CLCC1-202ENST00000348264 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.28■□□□□ 0.2
CLCC1-202ENST00000348264 IL1RAPL2Q9NP60 686 aa16.28■□□□□ 0.2
CLCC1-202ENST00000348264 HPS5Q9UPZ3 1129 aa16.28■□□□□ 0.2
CLCC1-202ENST00000348264 NDUFB9Q9Y6M9 179 aa16.28■□□□□ 0.2
CLCC1-202ENST00000348264 NPM3O75607 178 aaKnown RBP16.27■□□□□ 0.2
CLCC1-202ENST00000348264 CAP1Q01518 475 aa16.27■□□□□ 0.2
CLCC1-202ENST00000348264 MAP3K10Q02779 954 aa16.27■□□□□ 0.2
CLCC1-202ENST00000348264 RPAP2Q8IXW5 612 aaPredicted RBP16.27■□□□□ 0.2
CLCC1-202ENST00000348264 TEX11Q8IYF3 940 aa16.27■□□□□ 0.2
CLCC1-202ENST00000348264 RHPN1Q8TCX5 695 aa16.27■□□□□ 0.2
CLCC1-202ENST00000348264 CD99L2Q8TCZ2 262 aa16.27■□□□□ 0.2
CLCC1-202ENST00000348264 SH3RF3Q8TEJ3 882 aaPredicted RBP16.27■□□□□ 0.2
CLCC1-202ENST00000348264 AATFQ9NY61 560 aaKnown RBP eCLIP16.27■□□□□ 0.2
CLCC1-202ENST00000348264 KCNH4Q9UQ05 1017 aa16.27■□□□□ 0.2
CLCC1-202ENST00000348264 FAM196BA6NMK8 535 aa16.26■□□□□ 0.19
CLCC1-202ENST00000348264 APBB1O00213 710 aa16.26■□□□□ 0.19
CLCC1-202ENST00000348264 MAP4K4O95819 1239 aaPredicted RBP16.26■□□□□ 0.19
CLCC1-202ENST00000348264 HSP90AB4PQ58FF6 505 aa16.26■□□□□ 0.19
CLCC1-202ENST00000348264 FBXO46Q6PJ61 603 aaPredicted RBP16.26■□□□□ 0.19
CLCC1-202ENST00000348264 OTOP1Q7RTM1 612 aa16.26■□□□□ 0.19
CLCC1-202ENST00000348264 SCYL3Q8IZE3 742 aa16.26■□□□□ 0.19
CLCC1-202ENST00000348264 OSBPL5Q9H0X9 879 aaPredicted RBP16.26■□□□□ 0.19
CLCC1-202ENST00000348264 TRIM17Q9Y577 477 aa16.26■□□□□ 0.19
CLCC1-202ENST00000348264 PDE4DIPQ5VU43 2346 aa16.26■□□□□ 0.19
CLCC1-202ENST00000348264 KIAA0100Q14667 2235 aaKnown RBP16.26■□□□□ 0.19
CLCC1-202ENST00000348264 HMMRO75330 724 aa16.25■□□□□ 0.19
CLCC1-202ENST00000348264 RGS19P49795 217 aa16.25■□□□□ 0.19
CLCC1-202ENST00000348264 SOX10P56693 466 aa16.25■□□□□ 0.19
CLCC1-202ENST00000348264 SP3Q02447 781 aa16.25■□□□□ 0.19
CLCC1-202ENST00000348264 MOGSQ13724 837 aa16.25■□□□□ 0.19
CLCC1-202ENST00000348264 ERO1AQ96HE7 468 aa16.25■□□□□ 0.19
CLCC1-202ENST00000348264 ZFYVE28Q9HCC9 887 aa16.25■□□□□ 0.19
CLCC1-202ENST00000348264 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.25■□□□□ 0.19
CLCC1-202ENST00000348264 BRCA2P51587 3418 aa16.25■□□□□ 0.19
CLCC1-202ENST00000348264 MYH1P12882 1939 aa16.25■□□□□ 0.19
CLCC1-202ENST00000348264 PTPRAP18433 802 aa16.24■□□□□ 0.19
CLCC1-202ENST00000348264 PDE3AQ14432 1141 aa16.24■□□□□ 0.19
CLCC1-202ENST00000348264 KIF1BPQ96EK5 621 aa16.24■□□□□ 0.19
CLCC1-202ENST00000348264 NOL10Q9BSC4 688 aaKnown RBP16.24■□□□□ 0.19
CLCC1-202ENST00000348264 ANTXR1Q9H6X2 564 aa16.24■□□□□ 0.19
CLCC1-202ENST00000348264 ZCCHC17Q9NP64 241 aaKnown RBP16.24■□□□□ 0.19
CLCC1-202ENST00000348264 TNRC18O15417 2968 aaPredicted RBP16.24■□□□□ 0.19
CLCC1-202ENST00000348264 TBC1D12O60347 775 aa16.23■□□□□ 0.19
CLCC1-202ENST00000348264 IDH1O75874 414 aaKnown RBP16.23■□□□□ 0.19
CLCC1-202ENST00000348264 BAG3O95817 575 aa16.23■□□□□ 0.19
CLCC1-202ENST00000348264 PPP4CP60510 307 aa16.23■□□□□ 0.19
CLCC1-202ENST00000348264 CHMP4BQ9H444 224 aaKnown RBP16.23■□□□□ 0.19
CLCC1-202ENST00000348264 PICK1Q9NRD5 415 aa16.23■□□□□ 0.19
CLCC1-202ENST00000348264 FLT1P17948 1338 aa16.22■□□□□ 0.19
CLCC1-202ENST00000348264 TLR2O60603 784 aa16.22■□□□□ 0.19
CLCC1-202ENST00000348264 CTNND1O60716 968 aaKnown RBP16.22■□□□□ 0.19
CLCC1-202ENST00000348264 IGSF3O75054 1194 aa16.22■□□□□ 0.19
CLCC1-202ENST00000348264 PLCG2P16885 1265 aa16.22■□□□□ 0.19
CLCC1-202ENST00000348264 CYP7A1P22680 504 aa16.22■□□□□ 0.19
CLCC1-202ENST00000348264 DYNLL1P63167 89 aaKnown RBP16.22■□□□□ 0.19
CLCC1-202ENST00000348264 ANKRD23Q86SG2 305 aa16.22■□□□□ 0.19
CLCC1-202ENST00000348264 CCDC84Q86UT8 332 aaPredicted RBP16.22■□□□□ 0.19
CLCC1-202ENST00000348264 MAPKAPK5Q8IW41 473 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms