RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 ANO1Q5XXA6 986 aa7.03□□□□□ -1.28
CLCN3-201ENST00000347613 METTL16Q86W50 562 aaKnown RBP7.03□□□□□ -1.28
CLCN3-201ENST00000347613 MRPS27Q92552 414 aaKnown RBP7.03□□□□□ -1.28
CLCN3-201ENST00000347613 ALG1Q9BT22 464 aa7.03□□□□□ -1.28
CLCN3-201ENST00000347613 XPO4Q9C0E2 1151 aaKnown RBP7.03□□□□□ -1.28
CLCN3-201ENST00000347613 ANGEL1Q9UNK9 670 aaKnown RBP7.03□□□□□ -1.28
CLCN3-201ENST00000347613 CACNA1SQ13698 1873 aa7.03□□□□□ -1.28
CLCN3-201ENST00000347613 CAMTA2O94983 1202 aa7.03□□□□□ -1.28
CLCN3-201ENST00000347613 CRKLP46109 303 aaKnown RBP7.03□□□□□ -1.28
CLCN3-201ENST00000347613 GYG1P46976 350 aa7.03□□□□□ -1.28
CLCN3-201ENST00000347613 INTS13Q9NVM9 706 aa7.03□□□□□ -1.28
CLCN3-201ENST00000347613 POLR3EQ9NVU0 708 aa7.03□□□□□ -1.28
CLCN3-201ENST00000347613 WNK3Q9BYP7 1800 aa7.03□□□□□ -1.28
CLCN3-201ENST00000347613 A0A087X0B3 334 aa7.03□□□□□ -1.28
CLCN3-201ENST00000347613 COBLO75128 1261 aa7.03□□□□□ -1.28
CLCN3-201ENST00000347613 ADAMTS2O95450 1211 aa7.03□□□□□ -1.28
CLCN3-201ENST00000347613 DYNLL1P63167 89 aaKnown RBP7.03□□□□□ -1.28
CLCN3-201ENST00000347613 NCBP1Q09161 790 aaKnown RBP7.03□□□□□ -1.28
CLCN3-201ENST00000347613 STX1AQ16623 288 aa7.03□□□□□ -1.28
CLCN3-201ENST00000347613 E4F1Q66K89 784 aaPredicted RBP7.03□□□□□ -1.28
CLCN3-201ENST00000347613 SARM1Q6SZW1 724 aa7.03□□□□□ -1.28
CLCN3-201ENST00000347613 CHMP4CQ96CF2 233 aa7.03□□□□□ -1.28
CLCN3-201ENST00000347613 JAG2Q9Y219 1238 aa7.03□□□□□ -1.28
CLCN3-201ENST00000347613 HPSEQ9Y251 543 aa7.03□□□□□ -1.28
CLCN3-201ENST00000347613 ZMYM6O95789 1325 aa7.03□□□□□ -1.28
CLCN3-201ENST00000347613 CTIFO43310 598 aaKnown RBP7.02□□□□□ -1.29
CLCN3-201ENST00000347613 NMT2O60551 498 aa7.02□□□□□ -1.29
CLCN3-201ENST00000347613 U2AF2P26368 475 aaKnown RBP eCLIP7.02□□□□□ -1.297e-9■■■■□ 20.9
CLCN3-201ENST00000347613 METAP2P50579 478 aaKnown RBP eCLIP7.02□□□□□ -1.29
CLCN3-201ENST00000347613 MDM2Q00987 491 aaPredicted RBP7.02□□□□□ -1.29
CLCN3-201ENST00000347613 STK38Q15208 465 aa7.02□□□□□ -1.29
CLCN3-201ENST00000347613 ZNF827Q17R98 1081 aa7.02□□□□□ -1.29
CLCN3-201ENST00000347613 SLC4A8Q2Y0W8 1093 aa7.02□□□□□ -1.29
CLCN3-201ENST00000347613 RRP12Q5JTH9 1297 aaKnown RBP7.02□□□□□ -1.29
CLCN3-201ENST00000347613 ZNF512BQ96KM6 892 aaPredicted RBP7.02□□□□□ -1.29
CLCN3-201ENST00000347613 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.02□□□□□ -1.29
CLCN3-201ENST00000347613 IFNKQ9P0W0 207 aa7.02□□□□□ -1.29
CLCN3-201ENST00000347613 A0A0U1RQJ8 604 aa7.02□□□□□ -1.29
CLCN3-201ENST00000347613 CCDC69A6NI79 296 aa7.02□□□□□ -1.29
CLCN3-201ENST00000347613 PRDM1O75626 825 aa7.02□□□□□ -1.29
CLCN3-201ENST00000347613 NTSR2O95665 410 aa7.02□□□□□ -1.29
CLCN3-201ENST00000347613 ZFYP08048 801 aaPredicted RBP7.02□□□□□ -1.29
CLCN3-201ENST00000347613 LMOD1P29536 600 aaPredicted RBP7.02□□□□□ -1.29
CLCN3-201ENST00000347613 SLC39A14Q15043 492 aa7.02□□□□□ -1.29
CLCN3-201ENST00000347613 UBE3CQ15386 1083 aa7.02□□□□□ -1.29
CLCN3-201ENST00000347613 FAM182BQ5T319 152 aa7.02□□□□□ -1.29
CLCN3-201ENST00000347613 ATRIPQ8WXE1 791 aa7.02□□□□□ -1.29
CLCN3-201ENST00000347613 SDF4Q9BRK5 362 aa7.02□□□□□ -1.29
CLCN3-201ENST00000347613 PCDHB6Q9Y5E3 794 aa7.02□□□□□ -1.29
CLCN3-201ENST00000347613 KINO60870 393 aaKnown RBP7.02□□□□□ -1.29
CLCN3-201ENST00000347613 ANKRD7Q92527 254 aa7.02□□□□□ -1.29
CLCN3-201ENST00000347613 SLC26A6Q9BXS9 759 aa7.02□□□□□ -1.29
CLCN3-201ENST00000347613 ROBO1Q9Y6N7 1651 aa7.01□□□□□ -1.29
CLCN3-201ENST00000347613 A0A1W2PQ27 194 aa7.01□□□□□ -1.29
CLCN3-201ENST00000347613 A0A1W2PQ64 194 aa7.01□□□□□ -1.29
CLCN3-201ENST00000347613 A0A1W2PQD8 194 aa7.01□□□□□ -1.29
CLCN3-201ENST00000347613 PATL2C9JE40 543 aaKnown RBP7.01□□□□□ -1.29
CLCN3-201ENST00000347613 SKILP12757 684 aa7.01□□□□□ -1.29
CLCN3-201ENST00000347613 TNNT1P13805 278 aa7.01□□□□□ -1.29
CLCN3-201ENST00000347613 ATP6V1AP38606 617 aa7.01□□□□□ -1.29
CLCN3-201ENST00000347613 CBX1P83916 185 aa7.01□□□□□ -1.29
CLCN3-201ENST00000347613 FMR1Q06787 632 aaKnown RBP eCLIP7.01□□□□□ -1.297e-6■■□□□ 12.8
CLCN3-201ENST00000347613 CHRNDQ07001 517 aa7.01□□□□□ -1.29
CLCN3-201ENST00000347613 PUM3Q15397 648 aaKnown RBP7.01□□□□□ -1.29
CLCN3-201ENST00000347613 CCDC73Q6ZRK6 1079 aa7.01□□□□□ -1.29
CLCN3-201ENST00000347613 NYAP1Q6ZVC0 841 aa7.01□□□□□ -1.29
CLCN3-201ENST00000347613 RALYLQ86SE5 291 aaKnown RBP7.01□□□□□ -1.29
CLCN3-201ENST00000347613 TXNRD3Q86VQ6 643 aa7.01□□□□□ -1.29
CLCN3-201ENST00000347613 LPIN2Q92539 896 aa7.01□□□□□ -1.29
CLCN3-201ENST00000347613 MRFAP1L1Q96HT8 127 aa7.01□□□□□ -1.29
CLCN3-201ENST00000347613 ZNF396Q96N95 335 aaPredicted RBP7.01□□□□□ -1.29
CLCN3-201ENST00000347613 CTNNA3Q9UI47 895 aa7.01□□□□□ -1.29
CLCN3-201ENST00000347613 IL6STP40189 918 aaPredicted RBP7.01□□□□□ -1.29
CLCN3-201ENST00000347613 RBM6P78332 1123 aaKnown RBP7.01□□□□□ -1.29
CLCN3-201ENST00000347613 ERFEQ4G0M1 354 aa7.01□□□□□ -1.29
CLCN3-201ENST00000347613 TMEM67Q5HYA8 995 aa7.01□□□□□ -1.29
CLCN3-201ENST00000347613 PPP4R3BQ5MIZ7 849 aa7.01□□□□□ -1.29
CLCN3-201ENST00000347613 ZNF592Q92610 1267 aa7.01□□□□□ -1.29
CLCN3-201ENST00000347613 AIDAQ96BJ3 306 aa7.01□□□□□ -1.29
CLCN3-201ENST00000347613 PRIMPOLQ96LW4 560 aa7.01□□□□□ -1.29
CLCN3-201ENST00000347613 MYH6P13533 1939 aa7.01□□□□□ -1.29
CLCN3-201ENST00000347613 EXOC5O00471 708 aa7.01□□□□□ -1.29
CLCN3-201ENST00000347613 CPLX1O14810 134 aa7.01□□□□□ -1.29
CLCN3-201ENST00000347613 CELF1Q92879 486 aaKnown RBP7.01□□□□□ -1.29
CLCN3-201ENST00000347613 KIF3AQ9Y496 699 aa7.01□□□□□ -1.29
CLCN3-201ENST00000347613 LAMB2P55268 1798 aa7.01□□□□□ -1.29
CLCN3-201ENST00000347613 TIAM2Q8IVF5 1701 aa7□□□□□ -1.29
CLCN3-201ENST00000347613 CMA1P23946 247 aa7□□□□□ -1.29
CLCN3-201ENST00000347613 CDC25BP30305 580 aa7□□□□□ -1.29
CLCN3-201ENST00000347613 PKN1Q16512 942 aa7□□□□□ -1.29
CLCN3-201ENST00000347613 RASGRP2Q7LDG7 609 aa7□□□□□ -1.29
CLCN3-201ENST00000347613 SLC4A4Q9Y6R1 1079 aa7□□□□□ -1.29
CLCN3-201ENST00000347613 ABCC12Q96J65 1359 aa7□□□□□ -1.29
CLCN3-201ENST00000347613 PLCH1Q4KWH8 1693 aa7□□□□□ -1.29
CLCN3-201ENST00000347613 IFIT3O14879 490 aaKnown RBP7□□□□□ -1.29
CLCN3-201ENST00000347613 ZBTB43O43298 467 aa7□□□□□ -1.29
CLCN3-201ENST00000347613 PLEKHA8P1O95397 391 aa7□□□□□ -1.29
CLCN3-201ENST00000347613 YEATS4O95619 227 aa7□□□□□ -1.29
CLCN3-201ENST00000347613 ATP2B1P20020 1258 aa7□□□□□ -1.29
CLCN3-201ENST00000347613 NPY5RQ15761 445 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms