RNA–Protein interactions for RNA: ENST00000346798.7

APP-201, Transcript of amyloid beta precursor protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene APP, Length 3,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-201ENST00000346798 PCCAP05165 728 aaPredicted RBP13.62□□□□□ -0.23
APP-201ENST00000346798 PRR29P0C7W0 189 aa13.62□□□□□ -0.23
APP-201ENST00000346798 KRBA2Q6ZNG9 492 aa13.62□□□□□ -0.23
APP-201ENST00000346798 ADAMTS7Q9UKP4 1686 aa13.62□□□□□ -0.23
APP-201ENST00000346798 TRPM3Q9HCF6 1732 aaPredicted RBP13.61□□□□□ -0.23
APP-201ENST00000346798 SEC31AO94979 1220 aaKnown RBP13.61□□□□□ -0.23
APP-201ENST00000346798 SLFN14P0C7P3 912 aa13.61□□□□□ -0.23
APP-201ENST00000346798 BMP6P22004 513 aa13.61□□□□□ -0.23
APP-201ENST00000346798 GNG11P61952 73 aa13.61□□□□□ -0.23
APP-201ENST00000346798 KARSQ15046 597 aaKnown RBP13.61□□□□□ -0.23
APP-201ENST00000346798 DIS3L2Q8IYB7 885 aaKnown RBP13.61□□□□□ -0.23
APP-201ENST00000346798 NWD2Q9ULI1 1742 aa13.61□□□□□ -0.23
APP-201ENST00000346798 CPDO75976 1380 aa13.61□□□□□ -0.23
APP-201ENST00000346798 IKBKBO14920 756 aa13.61□□□□□ -0.23
APP-201ENST00000346798 CBFA2T2O43439 604 aa13.61□□□□□ -0.23
APP-201ENST00000346798 COBLO75128 1261 aa13.61□□□□□ -0.23
APP-201ENST00000346798 TDO2P48775 406 aa13.61□□□□□ -0.23
APP-201ENST00000346798 STX17P56962 302 aa13.61□□□□□ -0.23
APP-201ENST00000346798 MAP3K14Q99558 947 aa13.61□□□□□ -0.23
APP-201ENST00000346798 LY9Q9HBG7 655 aa13.61□□□□□ -0.23
APP-201ENST00000346798 SERTAD1Q9UHV2 236 aa13.61□□□□□ -0.23
APP-201ENST00000346798 NFE2L3Q9Y4A8 694 aa13.61□□□□□ -0.23
APP-201ENST00000346798 CASP1P29466 404 aa13.6□□□□□ -0.23
APP-201ENST00000346798 SAFBQ15424 915 aaKnown RBP eCLIP13.6□□□□□ -0.23
APP-201ENST00000346798 USP49Q70CQ1 688 aa13.6□□□□□ -0.23
APP-201ENST00000346798 FBXL16Q8N461 479 aa13.6□□□□□ -0.23
APP-201ENST00000346798 KRI1Q8N9T8 703 aaKnown RBP13.6□□□□□ -0.23
APP-201ENST00000346798 IGDCC4Q8TDY8 1250 aa13.6□□□□□ -0.23
APP-201ENST00000346798 ABCC6O95255 1503 aa13.6□□□□□ -0.23
APP-201ENST00000346798 CAMTA1Q9Y6Y1 1673 aa13.6□□□□□ -0.23
APP-201ENST00000346798 FANCGO15287 622 aa13.6□□□□□ -0.23
APP-201ENST00000346798 RESP18Q5W5W9 173 aa13.6□□□□□ -0.23
APP-201ENST00000346798 FAM217BQ9NTX9 383 aaPredicted RBP13.6□□□□□ -0.23
APP-201ENST00000346798 TUBE1Q9UJT0 475 aa13.6□□□□□ -0.23
APP-201ENST00000346798 AFMP43652 599 aa13.6□□□□□ -0.23
APP-201ENST00000346798 FMR1Q06787 632 aaKnown RBP eCLIP13.6□□□□□ -0.23
APP-201ENST00000346798 TERF2Q15554 542 aa13.6□□□□□ -0.23
APP-201ENST00000346798 TEX35Q5T0J7 233 aa13.6□□□□□ -0.23
APP-201ENST00000346798 VSTM4Q8IW00 320 aa13.6□□□□□ -0.23
APP-201ENST00000346798 HPSEQ9Y251 543 aa13.6□□□□□ -0.23
APP-201ENST00000346798 WDR17Q8IZU2 1322 aa13.6□□□□□ -0.23
APP-201ENST00000346798 MINDY4BA8MYZ0 360 aa13.59□□□□□ -0.23
APP-201ENST00000346798 PPP6R2O75170 966 aa13.59□□□□□ -0.23
APP-201ENST00000346798 CTSWP56202 376 aa13.59□□□□□ -0.23
APP-201ENST00000346798 L2HGDHQ9H9P8 463 aa13.59□□□□□ -0.23
APP-201ENST00000346798 EPB41L4AQ9HCS5 686 aaPredicted RBP13.59□□□□□ -0.23
APP-201ENST00000346798 PCDHB6Q9Y5E3 794 aa13.59□□□□□ -0.23
APP-201ENST00000346798 SPATA31A3Q5VYP0 1347 aa13.59□□□□□ -0.23
APP-201ENST00000346798 BAZ2BQ9UIF8 2168 aaKnown RBP13.59□□□□□ -0.23
APP-201ENST00000346798 GABPB1Q06547 395 aaPredicted RBP13.59□□□□□ -0.23
APP-201ENST00000346798 NTRK3Q16288 839 aa13.59□□□□□ -0.23
APP-201ENST00000346798 NLRP10Q86W26 655 aa13.59□□□□□ -0.23
APP-201ENST00000346798 NOSTRINQ8IVI9 506 aa13.59□□□□□ -0.23
APP-201ENST00000346798 IFNL3Q8IZI9 196 aa13.59□□□□□ -0.23
APP-201ENST00000346798 OXER1Q8TDS5 423 aa13.59□□□□□ -0.23
APP-201ENST00000346798 STAMQ92783 540 aa13.59□□□□□ -0.23
APP-201ENST00000346798 STRBPQ96SI9 672 aaKnown RBP13.59□□□□□ -0.23
APP-201ENST00000346798 SAMSN1Q9NSI8 373 aaKnown RBP13.59□□□□□ -0.23
APP-201ENST00000346798 INTS13Q9NVM9 706 aa13.59□□□□□ -0.23
APP-201ENST00000346798 PPP2R2CQ9Y2T4 447 aa13.59□□□□□ -0.23
APP-201ENST00000346798 SMIM22K7EJ46 135 aa13.59□□□□□ -0.23
APP-201ENST00000346798 CUTAO60888 179 aa13.59□□□□□ -0.23
APP-201ENST00000346798 PDE8BO95263 885 aa13.59□□□□□ -0.23
APP-201ENST00000346798 MFSD6Q6ZSS7 791 aa13.59□□□□□ -0.23
APP-201ENST00000346798 TOGARAM2Q6ZUX3 1019 aa13.59□□□□□ -0.23
APP-201ENST00000346798 PIGBQ92521 554 aa13.59□□□□□ -0.23
APP-201ENST00000346798 WDR24Q96S15 920 aa13.59□□□□□ -0.23
APP-201ENST00000346798 BAG1Q99933 345 aaPredicted RBP13.59□□□□□ -0.23
APP-201ENST00000346798 IRX2Q9BZI1 471 aaPredicted RBP13.59□□□□□ -0.23
APP-201ENST00000346798 CABP5Q9NP86 173 aa13.59□□□□□ -0.23
APP-201ENST00000346798 MAN1B1Q9UKM7 699 aa13.59□□□□□ -0.23
APP-201ENST00000346798 TACC3Q9Y6A5 838 aa13.59□□□□□ -0.23
APP-201ENST00000346798 STARD3NLO95772 234 aa13.58□□□□□ -0.24
APP-201ENST00000346798 CSF1RP07333 972 aa13.58□□□□□ -0.24
APP-201ENST00000346798 POSTNQ15063 836 aa13.58□□□□□ -0.24
APP-201ENST00000346798 TTF1Q15361 905 aaPredicted RBP13.58□□□□□ -0.24
APP-201ENST00000346798 TRIM65Q6PJ69 517 aa13.58□□□□□ -0.24
APP-201ENST00000346798 TRIM22Q8IYM9 498 aa13.58□□□□□ -0.24
APP-201ENST00000346798 TIGD1Q96MW7 591 aa13.58□□□□□ -0.24
APP-201ENST00000346798 FAM205CA6NFA0 338 aa13.58□□□□□ -0.24
APP-201ENST00000346798 RTN1Q16799 776 aa13.58□□□□□ -0.24
APP-201ENST00000346798 TMCO3Q6UWJ1 677 aa13.58□□□□□ -0.24
APP-201ENST00000346798 DHX58Q96C10 678 aa13.58□□□□□ -0.24
APP-201ENST00000346798 TMEM87BQ96K49 555 aa13.58□□□□□ -0.24
APP-201ENST00000346798 TRERF1Q96PN7 1200 aa13.58□□□□□ -0.24
APP-201ENST00000346798 TOB1P50616 345 aaPredicted RBP13.58□□□□□ -0.24
APP-201ENST00000346798 BMS1Q14692 1282 aaKnown RBP13.58□□□□□ -0.24
APP-201ENST00000346798 MTF1Q14872 753 aa13.58□□□□□ -0.24
APP-201ENST00000346798 CCDC93Q567U6 631 aa13.58□□□□□ -0.24
APP-201ENST00000346798 CADPS2Q86UW7 1296 aa13.58□□□□□ -0.24
APP-201ENST00000346798 REXO1L1PQ8IX06 675 aa13.58□□□□□ -0.24
APP-201ENST00000346798 SMYD4Q8IYR2 804 aaPredicted RBP13.58□□□□□ -0.24
APP-201ENST00000346798 SMARCE1Q969G3 411 aa13.58□□□□□ -0.24
APP-201ENST00000346798 CCDC34Q96HJ3 373 aa13.58□□□□□ -0.24
APP-201ENST00000346798 LZTFL1Q9NQ48 299 aa13.58□□□□□ -0.24
APP-201ENST00000346798 SLC4A4Q9Y6R1 1079 aa13.58□□□□□ -0.24
APP-201ENST00000346798 MST1RQ04912 1400 aa13.57□□□□□ -0.24
APP-201ENST00000346798 RIC1Q4ADV7 1423 aa13.57□□□□□ -0.24
APP-201ENST00000346798 GIGYF2Q6Y7W6 1299 aaKnown RBP13.57□□□□□ -0.24
APP-201ENST00000346798 ZBTB1Q9Y2K1 713 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms