RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 NRBP1Q9UHY1 535 aa19.55■□□□□ 0.72
SPAST-202ENST00000345662 MTMR3Q13615 1198 aa19.55■□□□□ 0.72
SPAST-202ENST00000345662 MAGEA1P43355 309 aa19.55■□□□□ 0.72
SPAST-202ENST00000345662 SEL1L2Q5TEA6 688 aa19.55■□□□□ 0.72
SPAST-202ENST00000345662 BANK1Q8NDB2 785 aa19.55■□□□□ 0.72
SPAST-202ENST00000345662 DIS3L2Q8IYB7 885 aaKnown RBP19.54■□□□□ 0.72
SPAST-202ENST00000345662 ABCC4O15439 1325 aa19.54■□□□□ 0.72
SPAST-202ENST00000345662 CD2BP2O95400 341 aaKnown RBP19.54■□□□□ 0.72
SPAST-202ENST00000345662 SLC4A8Q2Y0W8 1093 aa19.54■□□□□ 0.72
SPAST-202ENST00000345662 DESI2Q9BSY9 194 aa19.54■□□□□ 0.72
SPAST-202ENST00000345662 ANGEL1Q9UNK9 670 aaKnown RBP19.54■□□□□ 0.72
SPAST-202ENST00000345662 CLGNO14967 610 aa19.54■□□□□ 0.72
SPAST-202ENST00000345662 PPP1R13BQ96KQ4 1090 aa19.54■□□□□ 0.72
SPAST-202ENST00000345662 LAMC3Q9Y6N6 1575 aa19.54■□□□□ 0.72
SPAST-202ENST00000345662 TRMT44Q8IYL2 757 aaKnown RBP19.54■□□□□ 0.72
SPAST-202ENST00000345662 FERMT1Q9BQL6 677 aa19.54■□□□□ 0.72
SPAST-202ENST00000345662 TAOK1Q7L7X3 1001 aa19.53■□□□□ 0.72
SPAST-202ENST00000345662 MAPK8IP1Q9UQF2 711 aa19.53■□□□□ 0.72
SPAST-202ENST00000345662 MAP3K5Q99683 1374 aa19.53■□□□□ 0.72
SPAST-202ENST00000345662 PDE4DQ08499 809 aa19.53■□□□□ 0.72
SPAST-202ENST00000345662 NEDD9Q14511 834 aa19.53■□□□□ 0.72
SPAST-202ENST00000345662 VCXQ9H320 206 aa19.53■□□□□ 0.72
SPAST-202ENST00000345662 VSIG1Q86XK7 387 aa19.53■□□□□ 0.72
SPAST-202ENST00000345662 TRMT2AQ8IZ69 625 aaKnown RBP19.53■□□□□ 0.72
SPAST-202ENST00000345662 ERBB4Q15303 1308 aa19.53■□□□□ 0.72
SPAST-202ENST00000345662 CHL1O00533 1208 aa19.53■□□□□ 0.72
SPAST-202ENST00000345662 CIB2O75838 187 aa19.53■□□□□ 0.72
SPAST-202ENST00000345662 SEPT6Q14141 434 aa19.53■□□□□ 0.72
SPAST-202ENST00000345662 FCHSD1Q86WN1 690 aa19.53■□□□□ 0.72
SPAST-202ENST00000345662 PLCB3Q01970 1234 aa19.52■□□□□ 0.72
SPAST-202ENST00000345662 PNOCQ13519 176 aa19.52■□□□□ 0.72
SPAST-202ENST00000345662 CD109Q6YHK3 1445 aa19.52■□□□□ 0.72
SPAST-202ENST00000345662 TRAF5O00463 557 aa19.52■□□□□ 0.72
SPAST-202ENST00000345662 CCDC38Q502W7 563 aa19.52■□□□□ 0.72
SPAST-202ENST00000345662 PPANQ9NQ55 473 aaKnown RBP19.52■□□□□ 0.72
SPAST-202ENST00000345662 FLT4P35916 1363 aa19.52■□□□□ 0.72
SPAST-202ENST00000345662 GCKP35557 465 aa19.52■□□□□ 0.72
SPAST-202ENST00000345662 SF3B2Q13435 895 aaKnown RBP19.52■□□□□ 0.72
SPAST-202ENST00000345662 SV2BQ7L1I2 683 aa19.52■□□□□ 0.72
SPAST-202ENST00000345662 PSMB7Q99436 277 aa19.52■□□□□ 0.72
SPAST-202ENST00000345662 SLC9C1Q4G0N8 1177 aa19.52■□□□□ 0.71
SPAST-202ENST00000345662 KRT40Q6A162 431 aa19.52■□□□□ 0.71
SPAST-202ENST00000345662 CCDC63Q8NA47 563 aa19.52■□□□□ 0.71
SPAST-202ENST00000345662 MICAL1Q8TDZ2 1067 aa19.52■□□□□ 0.71
SPAST-202ENST00000345662 DDX41Q9UJV9 622 aaKnown RBP19.52■□□□□ 0.71
SPAST-202ENST00000345662 TNNI3KQ59H18 835 aa19.51■□□□□ 0.71
SPAST-202ENST00000345662 MYSM1Q5VVJ2 828 aa19.51■□□□□ 0.71
SPAST-202ENST00000345662 CNNM4Q6P4Q7 775 aa19.51■□□□□ 0.71
SPAST-202ENST00000345662 KLHL7Q8IXQ5 586 aa19.51■□□□□ 0.71
SPAST-202ENST00000345662 EFCAB13Q8IY85 973 aa19.51■□□□□ 0.71
SPAST-202ENST00000345662 CACTINQ8WUQ7 758 aaKnown RBP19.51■□□□□ 0.71
SPAST-202ENST00000345662 USP28Q96RU2 1077 aa19.51■□□□□ 0.71
SPAST-202ENST00000345662 FPGT-TNNI3KV9GXZ4 949 aa19.51■□□□□ 0.71
SPAST-202ENST00000345662 EEF2P13639 858 aaKnown RBP19.51■□□□□ 0.71
SPAST-202ENST00000345662 PFKFB1P16118 471 aa19.51■□□□□ 0.71
SPAST-202ENST00000345662 KLHL34Q8N239 644 aa19.51■□□□□ 0.71
SPAST-202ENST00000345662 SMARCC2Q8TAQ2 1214 aa19.51■□□□□ 0.71
SPAST-202ENST00000345662 RBM6P78332 1123 aaKnown RBP19.51■□□□□ 0.71
SPAST-202ENST00000345662 SLC39A6Q13433 755 aa19.51■□□□□ 0.71
SPAST-202ENST00000345662 FYB2Q5VWT5 728 aa19.51■□□□□ 0.71
SPAST-202ENST00000345662 HS2ST1Q7LGA3 356 aa19.51■□□□□ 0.71
SPAST-202ENST00000345662 SPATA31E1Q6ZUB1 1445 aa19.51■□□□□ 0.71
SPAST-202ENST00000345662 SEC31AO94979 1220 aaKnown RBP19.51■□□□□ 0.71
SPAST-202ENST00000345662 GNA11P29992 359 aa19.51■□□□□ 0.71
SPAST-202ENST00000345662 SLC8A1P32418 973 aa19.51■□□□□ 0.71
SPAST-202ENST00000345662 B4E1Z4 1266 aa19.5■□□□□ 0.71
SPAST-202ENST00000345662 ATP2A2P16615 1042 aaKnown RBP19.5■□□□□ 0.71
SPAST-202ENST00000345662 GJC1P36383 396 aa19.5■□□□□ 0.71
SPAST-202ENST00000345662 KRT71Q3SY84 523 aa19.5■□□□□ 0.71
SPAST-202ENST00000345662 EFCC1Q9HA90 598 aa19.5■□□□□ 0.71
SPAST-202ENST00000345662 ZSWIM6Q9HCJ5 1215 aa19.5■□□□□ 0.71
SPAST-202ENST00000345662 MAGEB6P1A0A0J9YX57 407 aa19.5■□□□□ 0.71
SPAST-202ENST00000345662 NPATQ14207 1427 aa19.5■□□□□ 0.71
SPAST-202ENST00000345662 CEP104O60308 925 aa19.5■□□□□ 0.71
SPAST-202ENST00000345662 STX10O60499 249 aa19.5■□□□□ 0.71
SPAST-202ENST00000345662 FAM204AQ9H8W3 233 aa19.5■□□□□ 0.71
SPAST-202ENST00000345662 SAMM50Q9Y512 469 aa19.5■□□□□ 0.71
SPAST-202ENST00000345662 LONRF2Q1L5Z9 754 aa19.5■□□□□ 0.71
SPAST-202ENST00000345662 TRMT1LQ7Z2T5 733 aaKnown RBP19.5■□□□□ 0.71
SPAST-202ENST00000345662 SRGAP1Q7Z6B7 1085 aa19.5■□□□□ 0.71
SPAST-202ENST00000345662 PLCB1Q9NQ66 1216 aa19.5■□□□□ 0.71
SPAST-202ENST00000345662 RPL13P26373 211 aaKnown RBP19.49■□□□□ 0.71
SPAST-202ENST00000345662 TERF2Q15554 542 aa19.49■□□□□ 0.71
SPAST-202ENST00000345662 CCDC110Q8TBZ0 833 aa19.49■□□□□ 0.71
SPAST-202ENST00000345662 CCDC152Q4G0S7 254 aa19.49■□□□□ 0.71
SPAST-202ENST00000345662 EXOC4Q96A65 974 aa19.49■□□□□ 0.71
SPAST-202ENST00000345662 TRIM31Q9BZY9 425 aa19.49■□□□□ 0.71
SPAST-202ENST00000345662 TPCN1Q9ULQ1 816 aa19.49■□□□□ 0.71
SPAST-202ENST00000345662 CCT5P48643 541 aa19.49■□□□□ 0.71
SPAST-202ENST00000345662 TRIM58Q8NG06 486 aa19.49■□□□□ 0.71
SPAST-202ENST00000345662 MIPOL1Q8TD10 442 aa19.49■□□□□ 0.71
SPAST-202ENST00000345662 MAGEB6Q8N7X4 407 aa19.49■□□□□ 0.71
SPAST-202ENST00000345662 OR8K1Q8NGG5 319 aa19.49■□□□□ 0.71
SPAST-202ENST00000345662 CDC23Q9UJX2 597 aa19.49■□□□□ 0.71
SPAST-202ENST00000345662 FAM135BQ49AJ0 1406 aa19.49■□□□□ 0.71
SPAST-202ENST00000345662 CEP128Q6ZU80 1094 aa19.48■□□□□ 0.71
SPAST-202ENST00000345662 IFIH1Q9BYX4 1025 aaKnown RBP19.48■□□□□ 0.71
SPAST-202ENST00000345662 PHLPP2Q6ZVD8 1323 aa19.48■□□□□ 0.71
SPAST-202ENST00000345662 GSTO1P78417 241 aa19.48■□□□□ 0.71
SPAST-202ENST00000345662 ASIC2Q16515 512 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms