RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 IER5LQ5T953 404 aa14.29□□□□□ -0.12
SNCA-202ENST00000345009 CDC42EP5Q6NZY7 148 aa14.29□□□□□ -0.12
SNCA-202ENST00000345009 HOOK2Q96ED9 719 aa14.29□□□□□ -0.12
SNCA-202ENST00000345009 EDC3Q96F86 508 aaKnown RBP14.29□□□□□ -0.12
SNCA-202ENST00000345009 FSD1Q9BTV5 496 aa14.29□□□□□ -0.12
SNCA-202ENST00000345009 GLIS2Q9BZE0 524 aaPredicted RBP14.29□□□□□ -0.12
SNCA-202ENST00000345009 DEFB129Q9H1M3 183 aa14.29□□□□□ -0.12
SNCA-202ENST00000345009 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.28□□□□□ -0.12
SNCA-202ENST00000345009 ASTN2O75129 1339 aaPredicted RBP14.28□□□□□ -0.12
SNCA-202ENST00000345009 ITGBL1O95965 494 aaPredicted RBP14.28□□□□□ -0.12
SNCA-202ENST00000345009 FAM83AQ86UY5 434 aa14.28□□□□□ -0.12
SNCA-202ENST00000345009 ZFP91Q96JP5 570 aaPredicted RBP14.28□□□□□ -0.12
SNCA-202ENST00000345009 PCDHAC2Q9Y5I4 1007 aa14.28□□□□□ -0.12
SNCA-202ENST00000345009 ZNF646O15015 1829 aaPredicted RBP14.27□□□□□ -0.12
SNCA-202ENST00000345009 ZNF532Q9HCE3 1301 aa14.27□□□□□ -0.12
SNCA-202ENST00000345009 MAGEB6P1A0A0J9YX57 407 aa14.27□□□□□ -0.13
SNCA-202ENST00000345009 TCP10L2B9ZVM9 353 aa14.27□□□□□ -0.13
SNCA-202ENST00000345009 RNF113AO15541 343 aaKnown RBP14.27□□□□□ -0.13
SNCA-202ENST00000345009 ADD2P35612 726 aa14.27□□□□□ -0.13
SNCA-202ENST00000345009 RASA3Q14644 834 aa14.27□□□□□ -0.13
SNCA-202ENST00000345009 RILPL2Q969X0 211 aa14.27□□□□□ -0.13
SNCA-202ENST00000345009 AATFQ9NY61 560 aaKnown RBP eCLIP14.27□□□□□ -0.13
SNCA-202ENST00000345009 MYH2Q9UKX2 1941 aa14.27□□□□□ -0.13
SNCA-202ENST00000345009 HIP1O00291 1037 aa14.26□□□□□ -0.13
SNCA-202ENST00000345009 ENTPD3O75355 529 aa14.26□□□□□ -0.13
SNCA-202ENST00000345009 TEX11Q8IYF3 940 aa14.26□□□□□ -0.13
SNCA-202ENST00000345009 ZNF384Q8TF68 577 aa14.26□□□□□ -0.13
SNCA-202ENST00000345009 IDI2Q9BXS1 227 aa14.26□□□□□ -0.13
SNCA-202ENST00000345009 ADM5C9JUS6 153 aa14.25□□□□□ -0.13
SNCA-202ENST00000345009 CELF2O95319 508 aaKnown RBP14.25□□□□□ -0.13
SNCA-202ENST00000345009 PDE4AP27815 886 aa14.25□□□□□ -0.13
SNCA-202ENST00000345009 APLP1P51693 650 aa14.25□□□□□ -0.13
SNCA-202ENST00000345009 C2orf69Q8N8R5 385 aa14.25□□□□□ -0.13
SNCA-202ENST00000345009 MIGA1Q8NAN2 632 aa14.25□□□□□ -0.13
SNCA-202ENST00000345009 FAM151AQ8WW52 585 aa14.25□□□□□ -0.13
SNCA-202ENST00000345009 AIDAQ96BJ3 306 aa14.25□□□□□ -0.13
SNCA-202ENST00000345009 CDCA5Q96FF9 252 aa14.25□□□□□ -0.13
SNCA-202ENST00000345009 DDRGK1Q96HY6 314 aa14.25□□□□□ -0.13
SNCA-202ENST00000345009 CRNKL1Q9BZJ0 848 aaKnown RBP14.25□□□□□ -0.13
SNCA-202ENST00000345009 POLR2AP24928 1970 aaKnown RBP14.25□□□□□ -0.13
SNCA-202ENST00000345009 PASKQ96RG2 1323 aa14.24□□□□□ -0.13
SNCA-202ENST00000345009 TCRBV5S4A2TA0A5A2 114 aa14.24□□□□□ -0.13
SNCA-202ENST00000345009 TMEM88BA6NKF7 163 aa14.24□□□□□ -0.13
SNCA-202ENST00000345009 TRAF5O00463 557 aa14.24□□□□□ -0.13
SNCA-202ENST00000345009 PPP1R12BO60237 982 aaPredicted RBP14.24□□□□□ -0.13
SNCA-202ENST00000345009 USP5P45974 858 aa14.24□□□□□ -0.13
SNCA-202ENST00000345009 RGS3P49796 1198 aa14.24□□□□□ -0.13
SNCA-202ENST00000345009 CACNB3P54284 484 aa14.24□□□□□ -0.13
SNCA-202ENST00000345009 RHBDL3P58872 404 aa14.24□□□□□ -0.13
SNCA-202ENST00000345009 TTC22Q5TAA0 569 aa14.24□□□□□ -0.13
SNCA-202ENST00000345009 ADGRA1Q86SQ6 560 aa14.24□□□□□ -0.13
SNCA-202ENST00000345009 ZSCAN29Q8IWY8 852 aaPredicted RBP14.24□□□□□ -0.13
SNCA-202ENST00000345009 SH3RF3Q8TEJ3 882 aaPredicted RBP14.24□□□□□ -0.13
SNCA-202ENST00000345009 APPBP2Q92624 585 aa14.24□□□□□ -0.13
SNCA-202ENST00000345009 ZNF408Q9H9D4 720 aa14.24□□□□□ -0.13
SNCA-202ENST00000345009 COLQQ9Y215 455 aaPredicted RBP14.24□□□□□ -0.13
SNCA-202ENST00000345009 ADAMTSL1Q8N6G6 1762 aa14.24□□□□□ -0.13
SNCA-202ENST00000345009 WDHD1O75717 1129 aaPredicted RBP14.23□□□□□ -0.13
SNCA-202ENST00000345009 GNAT2P19087 354 aa14.23□□□□□ -0.13
SNCA-202ENST00000345009 FKBP1BP68106 108 aa14.23□□□□□ -0.13
SNCA-202ENST00000345009 TCP10Q12799 353 aa14.23□□□□□ -0.13
SNCA-202ENST00000345009 TTLL12Q14166 644 aaPredicted RBP14.23□□□□□ -0.13
SNCA-202ENST00000345009 DHX36Q9H2U1 1008 aaKnown RBP14.23□□□□□ -0.13
SNCA-202ENST00000345009 HSPA6P17066 643 aa14.22□□□□□ -0.13
SNCA-202ENST00000345009 MFAP1P55081 439 aaKnown RBP14.22□□□□□ -0.13
SNCA-202ENST00000345009 NFIAQ12857 509 aa14.22□□□□□ -0.13
SNCA-202ENST00000345009 PICALMQ13492 652 aa14.22□□□□□ -0.13
SNCA-202ENST00000345009 DCAF15Q66K64 600 aa14.22□□□□□ -0.13
SNCA-202ENST00000345009 ARMC9Q7Z3E5 817 aa14.22□□□□□ -0.13
SNCA-202ENST00000345009 AMOTL1Q8IY63 956 aa14.22□□□□□ -0.13
SNCA-202ENST00000345009 TGFBRAP1Q8WUH2 860 aa14.22□□□□□ -0.13
SNCA-202ENST00000345009 TMEM39BQ9GZU3 492 aa14.22□□□□□ -0.13
SNCA-202ENST00000345009 DIAPH3Q9NSV4 1193 aa14.22□□□□□ -0.13
SNCA-202ENST00000345009 SCAF8Q9UPN6 1271 aaKnown RBP14.22□□□□□ -0.13
SNCA-202ENST00000345009 MBD4O95243 580 aa14.21□□□□□ -0.13
SNCA-202ENST00000345009 DYNLL1P63167 89 aaKnown RBP14.21□□□□□ -0.13
SNCA-202ENST00000345009 PRAMEF18Q5VWM3 479 aa14.21□□□□□ -0.13
SNCA-202ENST00000345009 RIOK1Q9BRS2 568 aaKnown RBP14.21□□□□□ -0.13
SNCA-202ENST00000345009 GBA2Q9HCG7 927 aaPredicted RBP14.21□□□□□ -0.13
SNCA-202ENST00000345009 HELLSQ9NRZ9 838 aa14.21□□□□□ -0.13
SNCA-202ENST00000345009 ATP8A2Q9NTI2 1148 aa14.21□□□□□ -0.13
SNCA-202ENST00000345009 FAM198AQ9UFP1 575 aa14.21□□□□□ -0.13
SNCA-202ENST00000345009 ABT1Q9ULW3 272 aaKnown RBP14.21□□□□□ -0.13
SNCA-202ENST00000345009 RFX7Q2KHR2 1363 aa14.21□□□□□ -0.14
SNCA-202ENST00000345009 STK25O00506 426 aa14.2□□□□□ -0.14
SNCA-202ENST00000345009 SDSP20132 328 aa14.2□□□□□ -0.14
SNCA-202ENST00000345009 IREB2P48200 963 aaKnown RBP14.2□□□□□ -0.14
SNCA-202ENST00000345009 ZMYM1Q5SVZ6 1142 aa14.2□□□□□ -0.14
SNCA-202ENST00000345009 NBPF12Q5TAG4 269 aaPredicted RBP14.2□□□□□ -0.14
SNCA-202ENST00000345009 CST9Q5W186 159 aa14.2□□□□□ -0.14
SNCA-202ENST00000345009 TTC6Q86TZ1 520 aa14.2□□□□□ -0.14
SNCA-202ENST00000345009 MAPKAPK5Q8IW41 473 aa14.2□□□□□ -0.14
SNCA-202ENST00000345009 RUFY2Q8WXA3 655 aa14.2□□□□□ -0.14
SNCA-202ENST00000345009 CSRNP1Q96S65 589 aa14.2□□□□□ -0.14
SNCA-202ENST00000345009 TRIM34Q9BYJ4 488 aa14.2□□□□□ -0.14
SNCA-202ENST00000345009 NACAP1Q9BZK3 213 aa14.2□□□□□ -0.14
SNCA-202ENST00000345009 PUS7LQ9H0K6 701 aaKnown RBP14.2□□□□□ -0.14
SNCA-202ENST00000345009 OSBPL5Q9H0X9 879 aaPredicted RBP14.2□□□□□ -0.14
SNCA-202ENST00000345009 ARMT1Q9H993 441 aa14.2□□□□□ -0.14
SNCA-202ENST00000345009 STK24Q9Y6E0 443 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms