RNA–Protein interactions for RNA: ENST00000344550.4

CEACAM3-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM3, Length 1,022 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-201ENST00000344550 SNAPC2Q13487 334 aa24.52■■□□□ 1.52
CEACAM3-201ENST00000344550 TBC1D9Q6ZT07 1266 aa24.52■■□□□ 1.52
CEACAM3-201ENST00000344550 MIGA2Q7L4E1 593 aa24.52■■□□□ 1.52
CEACAM3-201ENST00000344550 OTUD5Q96G74 571 aa24.52■■□□□ 1.52
CEACAM3-201ENST00000344550 NOL10Q9BSC4 688 aaKnown RBP24.52■■□□□ 1.52
CEACAM3-201ENST00000344550 ATRNL1Q5VV63 1379 aa24.52■■□□□ 1.52
CEACAM3-201ENST00000344550 COL2A1P02458 1487 aaPredicted RBP24.51■■□□□ 1.51
CEACAM3-201ENST00000344550 TBC1D12O60347 775 aa24.51■■□□□ 1.51
CEACAM3-201ENST00000344550 RAB11FIP3O75154 756 aa24.51■■□□□ 1.51
CEACAM3-201ENST00000344550 CERS3Q8IU89 383 aa24.51■■□□□ 1.51
CEACAM3-201ENST00000344550 ZKSCAN4Q969J2 545 aaPredicted RBP24.51■■□□□ 1.51
CEACAM3-201ENST00000344550 KIF1BPQ96EK5 621 aa24.51■■□□□ 1.51
CEACAM3-201ENST00000344550 PTPN18Q99952 460 aa24.51■■□□□ 1.51
CEACAM3-201ENST00000344550 EXOC6BQ9Y2D4 811 aa24.51■■□□□ 1.51
CEACAM3-201ENST00000344550 CCL15-CCL14A0A0B4J2E2 113 aa24.5■■□□□ 1.51
CEACAM3-201ENST00000344550 CYP2E1P05181 493 aaPredicted RBP24.5■■□□□ 1.51
CEACAM3-201ENST00000344550 PPP4CP60510 307 aa24.5■■□□□ 1.51
CEACAM3-201ENST00000344550 CCL15Q16663 113 aa24.5■■□□□ 1.51
CEACAM3-201ENST00000344550 NAA16Q6N069 864 aaPredicted RBP24.5■■□□□ 1.51
CEACAM3-201ENST00000344550 RHPN1Q8TCX5 695 aa24.5■■□□□ 1.51
CEACAM3-201ENST00000344550 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.5■■□□□ 1.51
CEACAM3-201ENST00000344550 ZSCAN29Q8IWY8 852 aaPredicted RBP24.49■■□□□ 1.51
CEACAM3-201ENST00000344550 ZFPM1Q8IX07 1006 aa24.49■■□□□ 1.51
CEACAM3-201ENST00000344550 CLASRPQ8N2M8 674 aaKnown RBP24.49■■□□□ 1.51
CEACAM3-201ENST00000344550 BRI3BPQ8WY22 251 aa24.49■■□□□ 1.51
CEACAM3-201ENST00000344550 CCDC8Q9H0W5 538 aaPredicted RBP24.49■■□□□ 1.51
CEACAM3-201ENST00000344550 IRF6O14896 467 aa24.48■■□□□ 1.51
CEACAM3-201ENST00000344550 INPP5BP32019 993 aa24.48■■□□□ 1.51
CEACAM3-201ENST00000344550 AK9Q5TCS8 1911 aa24.48■■□□□ 1.51
CEACAM3-201ENST00000344550 AACSQ86V21 672 aa24.48■■□□□ 1.51
CEACAM3-201ENST00000344550 CNKSR2Q8WXI2 1034 aa24.48■■□□□ 1.51
CEACAM3-201ENST00000344550 SNRKQ9NRH2 765 aa24.48■■□□□ 1.51
CEACAM3-201ENST00000344550 KCNH4Q9UQ05 1017 aa24.48■■□□□ 1.51
CEACAM3-201ENST00000344550 PHF20L1A8MW92 1017 aa24.47■■□□□ 1.51
CEACAM3-201ENST00000344550 CRHR2Q13324 411 aa24.47■■□□□ 1.51
CEACAM3-201ENST00000344550 SH3BP5LQ7L8J4 393 aa24.47■■□□□ 1.51
CEACAM3-201ENST00000344550 SIRT2Q8IXJ6 389 aa24.47■■□□□ 1.51
CEACAM3-201ENST00000344550 R3HDMLQ9H3Y0 253 aa24.47■■□□□ 1.51
CEACAM3-201ENST00000344550 ZFYVE28Q9HCC9 887 aa24.47■■□□□ 1.51
CEACAM3-201ENST00000344550 DDX4Q9NQI0 724 aaKnown RBP24.47■■□□□ 1.51
CEACAM3-201ENST00000344550 CCDC85CA6NKD9 419 aa24.46■■□□□ 1.51
CEACAM3-201ENST00000344550 CXCL11O14625 94 aa24.46■■□□□ 1.51
CEACAM3-201ENST00000344550 CTNND1O60716 968 aaKnown RBP24.46■■□□□ 1.51
CEACAM3-201ENST00000344550 ZAP70P43403 619 aa24.46■■□□□ 1.51
CEACAM3-201ENST00000344550 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.46■■□□□ 1.51
CEACAM3-201ENST00000344550 ERO1AQ96HE7 468 aa24.46■■□□□ 1.51
CEACAM3-201ENST00000344550 DHX36Q9H2U1 1008 aaKnown RBP24.46■■□□□ 1.51
CEACAM3-201ENST00000344550 TLR7Q9NYK1 1049 aaKnown RBP24.46■■□□□ 1.51
CEACAM3-201ENST00000344550 DDTLA6NHG4 134 aaPredicted RBP24.45■■□□□ 1.5
CEACAM3-201ENST00000344550 PICALMQ13492 652 aa24.45■■□□□ 1.5
CEACAM3-201ENST00000344550 ARHGEF6Q15052 776 aa24.45■■□□□ 1.5
CEACAM3-201ENST00000344550 TEX11Q8IYF3 940 aa24.45■■□□□ 1.5
CEACAM3-201ENST00000344550 SCYL3Q8IZE3 742 aa24.45■■□□□ 1.5
CEACAM3-201ENST00000344550 PICK1Q9NRD5 415 aa24.45■■□□□ 1.5
CEACAM3-201ENST00000344550 RGS19P49795 217 aa24.44■■□□□ 1.5
CEACAM3-201ENST00000344550 TTF1Q15361 905 aaPredicted RBP24.44■■□□□ 1.5
CEACAM3-201ENST00000344550 FBXO46Q6PJ61 603 aaPredicted RBP24.44■■□□□ 1.5
CEACAM3-201ENST00000344550 OSBPL5Q9H0X9 879 aaPredicted RBP24.44■■□□□ 1.5
CEACAM3-201ENST00000344550 DOCK2Q92608 1830 aa24.44■■□□□ 1.5
CEACAM3-201ENST00000344550 MAST2Q6P0Q8 1798 aa24.44■■□□□ 1.5
CEACAM3-201ENST00000344550 MAP3K12Q12852 859 aa24.43■■□□□ 1.5
CEACAM3-201ENST00000344550 TAF1CQ15572 869 aaPredicted RBP24.43■■□□□ 1.5
CEACAM3-201ENST00000344550 HERC5Q9UII4 1024 aaKnown RBP24.43■■□□□ 1.5
CEACAM3-201ENST00000344550 SP3Q02447 781 aa24.42■■□□□ 1.5
CEACAM3-201ENST00000344550 ANKRD23Q86SG2 305 aa24.42■■□□□ 1.5
CEACAM3-201ENST00000344550 FAM43AQ8N2R8 423 aa24.42■■□□□ 1.5
CEACAM3-201ENST00000344550 TBC1D2Q9BYX2 928 aa24.42■■□□□ 1.5
CEACAM3-201ENST00000344550 PIH1D3Q9NQM4 214 aaKnown RBP24.42■■□□□ 1.5
CEACAM3-201ENST00000344550 PI4KBQ9UBF8 816 aa24.42■■□□□ 1.5
CEACAM3-201ENST00000344550 IFIT2P09913 472 aaKnown RBP24.41■■□□□ 1.5
CEACAM3-201ENST00000344550 IL1RAPL2Q9NP60 686 aa24.41■■□□□ 1.5
CEACAM3-201ENST00000344550 AATFQ9NY61 560 aaKnown RBP eCLIP24.41■■□□□ 1.5
CEACAM3-201ENST00000344550 BTBD19C9JJ37 291 aa24.4■■□□□ 1.5
CEACAM3-201ENST00000344550 TLR2O60603 784 aa24.4■■□□□ 1.5
CEACAM3-201ENST00000344550 PTPRAP18433 802 aa24.4■■□□□ 1.5
CEACAM3-201ENST00000344550 C20orf194Q5TEA3 1177 aa24.4■■□□□ 1.5
CEACAM3-201ENST00000344550 SH3RF3Q8TEJ3 882 aaPredicted RBP24.4■■□□□ 1.5
CEACAM3-201ENST00000344550 IDH1O75874 414 aaKnown RBP24.39■■□□□ 1.49
CEACAM3-201ENST00000344550 FASTKD5Q7L8L6 764 aaKnown RBP24.39■■□□□ 1.49
CEACAM3-201ENST00000344550 METTL16Q86W50 562 aaKnown RBP24.39■■□□□ 1.49
CEACAM3-201ENST00000344550 FOXP4Q8IVH2 680 aaPredicted RBP24.39■■□□□ 1.49
CEACAM3-201ENST00000344550 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.39■■□□□ 1.49
CEACAM3-201ENST00000344550 HPS5Q9UPZ3 1129 aa24.39■■□□□ 1.49
CEACAM3-201ENST00000344550 CYP7A1P22680 504 aa24.38■■□□□ 1.49
CEACAM3-201ENST00000344550 GINM1Q9NU53 330 aa24.38■■□□□ 1.49
CEACAM3-201ENST00000344550 AFG3L2Q9Y4W6 797 aa24.38■■□□□ 1.49
CEACAM3-201ENST00000344550 ZHX2Q9Y6X8 837 aa24.38■■□□□ 1.49
CEACAM3-201ENST00000344550 OTOP1Q7RTM1 612 aa24.37■■□□□ 1.49
CEACAM3-201ENST00000344550 ADGRA1Q86SQ6 560 aa24.37■■□□□ 1.49
CEACAM3-201ENST00000344550 SLC45A1Q9Y2W3 748 aa24.37■■□□□ 1.49
CEACAM3-201ENST00000344550 A0A0G2JLL6 359 aaPredicted RBP24.36■■□□□ 1.49
CEACAM3-201ENST00000344550 GNRH1P01148 92 aa24.36■■□□□ 1.49
CEACAM3-201ENST00000344550 PRRT2Q7Z6L0 340 aaPredicted RBP24.36■■□□□ 1.49
CEACAM3-201ENST00000344550 TGFBRAP1Q8WUH2 860 aa24.36■■□□□ 1.49
CEACAM3-201ENST00000344550 LRRCC1Q9C099 1032 aa24.36■■□□□ 1.49
CEACAM3-201ENST00000344550 EFCC1Q9HA90 598 aa24.36■■□□□ 1.49
CEACAM3-201ENST00000344550 TRIM17Q9Y577 477 aa24.36■■□□□ 1.49
CEACAM3-201ENST00000344550 FLT1P17948 1338 aa24.35■■□□□ 1.49
CEACAM3-201ENST00000344550 ATP5JP18859 108 aa24.35■■□□□ 1.49
CEACAM3-201ENST00000344550 MOGSQ13724 837 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 152 ms