RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.95■□□□□ 0.3
CLCN1-201ENST00000343257 MICU3Q86XE3 530 aa16.95■□□□□ 0.3
CLCN1-201ENST00000343257 DSCC1Q9BVC3 393 aa16.95■□□□□ 0.3
CLCN1-201ENST00000343257 AMOTL2Q9Y2J4 779 aa16.95■□□□□ 0.3
CLCN1-201ENST00000343257 A0A087WZG4 1122 aa16.95■□□□□ 0.3
CLCN1-201ENST00000343257 ENC1O14682 589 aa16.95■□□□□ 0.3
CLCN1-201ENST00000343257 IFIT1P09914 478 aaKnown RBP16.95■□□□□ 0.3
CLCN1-201ENST00000343257 CORO7P57737 925 aa16.95■□□□□ 0.3
CLCN1-201ENST00000343257 RALYLQ86SE5 291 aaKnown RBP16.95■□□□□ 0.3
CLCN1-201ENST00000343257 NKX2-3Q8TAU0 364 aa16.95■□□□□ 0.3
CLCN1-201ENST00000343257 PPM1EQ8WY54 764 aa16.95■□□□□ 0.3
CLCN1-201ENST00000343257 EHD4Q9H223 541 aa16.95■□□□□ 0.3
CLCN1-201ENST00000343257 CDC25AP30304 524 aa16.95■□□□□ 0.3
CLCN1-201ENST00000343257 HDGFP51858 240 aaKnown RBP16.95■□□□□ 0.3
CLCN1-201ENST00000343257 SMYD4Q8IYR2 804 aaPredicted RBP16.95■□□□□ 0.3
CLCN1-201ENST00000343257 SEC31BQ9NQW1 1179 aa16.95■□□□□ 0.3
CLCN1-201ENST00000343257 TFR2Q9UP52 801 aa16.95■□□□□ 0.3
CLCN1-201ENST00000343257 ABCC6O95255 1503 aa16.94■□□□□ 0.3
CLCN1-201ENST00000343257 LTKP29376 864 aa16.94■□□□□ 0.3
CLCN1-201ENST00000343257 RFX5P48382 616 aaPredicted RBP16.94■□□□□ 0.3
CLCN1-201ENST00000343257 CAPZA3Q96KX2 299 aa16.94■□□□□ 0.3
CLCN1-201ENST00000343257 SENP2Q9HC62 589 aa16.94■□□□□ 0.3
CLCN1-201ENST00000343257 COPRSQ9NQ92 184 aa16.94■□□□□ 0.3
CLCN1-201ENST00000343257 DDX21Q9NR30 783 aaKnown RBP eCLIP16.94■□□□□ 0.3
CLCN1-201ENST00000343257 HOOK1Q9UJC3 728 aaKnown RBP16.94■□□□□ 0.3
CLCN1-201ENST00000343257 HPSEQ9Y251 543 aa16.94■□□□□ 0.3
CLCN1-201ENST00000343257 CASP14P31944 242 aa16.94■□□□□ 0.3
CLCN1-201ENST00000343257 ZMYM1Q5SVZ6 1142 aa16.94■□□□□ 0.3
CLCN1-201ENST00000343257 MED15Q96RN5 788 aa16.94■□□□□ 0.3
CLCN1-201ENST00000343257 CCT6AP40227 531 aaKnown RBP16.93■□□□□ 0.3
CLCN1-201ENST00000343257 AFMP43652 599 aa16.93■□□□□ 0.3
CLCN1-201ENST00000343257 PDIA6Q15084 440 aa16.93■□□□□ 0.3
CLCN1-201ENST00000343257 AKAP4Q5JQC9 854 aa16.93■□□□□ 0.3
CLCN1-201ENST00000343257 LMOD2Q6P5Q4 547 aa16.93■□□□□ 0.3
CLCN1-201ENST00000343257 FAM71BQ8TC56 605 aa16.93■□□□□ 0.3
CLCN1-201ENST00000343257 AFAP1L1Q8TED9 768 aa16.93■□□□□ 0.3
CLCN1-201ENST00000343257 CCDC85AQ96PX6 553 aaPredicted RBP16.93■□□□□ 0.3
CLCN1-201ENST00000343257 HELLSQ9NRZ9 838 aa16.93■□□□□ 0.3
CLCN1-201ENST00000343257 HDAC6Q9UBN7 1215 aa16.93■□□□□ 0.3
CLCN1-201ENST00000343257 TRIM10Q9UDY6 481 aa16.93■□□□□ 0.3
CLCN1-201ENST00000343257 SH3TC1Q8TE82 1336 aa16.93■□□□□ 0.3
CLCN1-201ENST00000343257 PALLDQ8WX93 1383 aa16.93■□□□□ 0.3
CLCN1-201ENST00000343257 ANTXR2P58335 489 aa16.93■□□□□ 0.3
CLCN1-201ENST00000343257 PLEKHO1Q53GL0 409 aaPredicted RBP16.93■□□□□ 0.3
CLCN1-201ENST00000343257 TTC39AQ5SRH9 613 aa16.93■□□□□ 0.3
CLCN1-201ENST00000343257 FKBP15Q5T1M5 1219 aa16.93■□□□□ 0.3
CLCN1-201ENST00000343257 JMYQ8N9B5 988 aa16.93■□□□□ 0.3
CLCN1-201ENST00000343257 RNF113AO15541 343 aaKnown RBP16.93■□□□□ 0.3
CLCN1-201ENST00000343257 SRGAP2O75044 1071 aa16.93■□□□□ 0.3
CLCN1-201ENST00000343257 FGAP02671 866 aa16.93■□□□□ 0.3
CLCN1-201ENST00000343257 IBSPP21815 317 aaPredicted RBP16.93■□□□□ 0.3
CLCN1-201ENST00000343257 CCT5P48643 541 aa16.93■□□□□ 0.3
CLCN1-201ENST00000343257 POSTNQ15063 836 aa16.93■□□□□ 0.3
CLCN1-201ENST00000343257 PTPAQ15257 358 aa16.93■□□□□ 0.3
CLCN1-201ENST00000343257 DNAJC21Q5F1R6 531 aaKnown RBP16.93■□□□□ 0.3
CLCN1-201ENST00000343257 RESP18Q5W5W9 173 aa16.93■□□□□ 0.3
CLCN1-201ENST00000343257 HNRNPLLQ8WVV9 542 aaKnown RBP16.93■□□□□ 0.3
CLCN1-201ENST00000343257 RAB21Q9UL25 225 aa16.93■□□□□ 0.3
CLCN1-201ENST00000343257 IMMTQ16891 758 aaKnown RBP16.92■□□□□ 0.3
CLCN1-201ENST00000343257 USP49Q70CQ1 688 aa16.92■□□□□ 0.3
CLCN1-201ENST00000343257 SECISBP2LQ93073 1101 aaKnown RBP16.92■□□□□ 0.3
CLCN1-201ENST00000343257 SLF1Q9BQI6 1058 aa16.92■□□□□ 0.3
CLCN1-201ENST00000343257 NCAPD2Q15021 1401 aa16.92■□□□□ 0.3
CLCN1-201ENST00000343257 MRPS25P82663 173 aaKnown RBP16.92■□□□□ 0.3
CLCN1-201ENST00000343257 MSANTD4Q8NCY6 345 aa16.92■□□□□ 0.3
CLCN1-201ENST00000343257 STAMQ92783 540 aa16.92■□□□□ 0.3
CLCN1-201ENST00000343257 INCENPQ9NQS7 918 aa16.92■□□□□ 0.3
CLCN1-201ENST00000343257 MKRN1Q9UHC7 482 aaKnown RBP16.92■□□□□ 0.3
CLCN1-201ENST00000343257 GUCA1BQ9UMX6 200 aa16.92■□□□□ 0.3
CLCN1-201ENST00000343257 PPARDQ03181 441 aa16.91■□□□□ 0.3
CLCN1-201ENST00000343257 TRDNQ13061 729 aa16.91■□□□□ 0.3
CLCN1-201ENST00000343257 LRRC24Q50LG9 513 aa16.91■□□□□ 0.3
CLCN1-201ENST00000343257 FBXW10Q5XX13 1052 aa16.91■□□□□ 0.3
CLCN1-201ENST00000343257 SMARCC1Q92922 1105 aaPredicted RBP16.91■□□□□ 0.3
CLCN1-201ENST00000343257 MYCBPQ99417 103 aaPredicted RBP16.91■□□□□ 0.3
CLCN1-201ENST00000343257 GEMIN8Q9NWZ8 242 aaKnown RBP16.91■□□□□ 0.3
CLCN1-201ENST00000343257 LRRC37A3O60309 1634 aa16.91■□□□□ 0.3
CLCN1-201ENST00000343257 NRXN3Q9Y4C0 1643 aa16.91■□□□□ 0.3
CLCN1-201ENST00000343257 NAPGQ99747 312 aaPredicted RBP16.91■□□□□ 0.3
CLCN1-201ENST00000343257 POLD4Q9HCU8 107 aa16.91■□□□□ 0.3
CLCN1-201ENST00000343257 POTEB2H3BUK9 544 aa16.91■□□□□ 0.3
CLCN1-201ENST00000343257 USP5P45974 858 aa16.91■□□□□ 0.3
CLCN1-201ENST00000343257 METAP2P50579 478 aaKnown RBP eCLIP16.91■□□□□ 0.3
CLCN1-201ENST00000343257 MNAT1P51948 309 aa16.91■□□□□ 0.3
CLCN1-201ENST00000343257 NR1I3Q14994 352 aa16.91■□□□□ 0.3
CLCN1-201ENST00000343257 KCNJ14Q9UNX9 436 aa16.91■□□□□ 0.3
CLCN1-201ENST00000343257 UTYO14607 1347 aa16.91■□□□□ 0.3
CLCN1-201ENST00000343257 FXR1P51114 621 aaKnown RBP eCLIP16.9■□□□□ 0.3
CLCN1-201ENST00000343257 PI16Q6UXB8 463 aa16.9■□□□□ 0.3
CLCN1-201ENST00000343257 NFXL1Q6ZNB6 911 aa16.9■□□□□ 0.3
CLCN1-201ENST00000343257 ANKRD13DQ6ZTN6 518 aa16.9■□□□□ 0.3
CLCN1-201ENST00000343257 EP400NLQ6ZTU2 488 aa16.9■□□□□ 0.3
CLCN1-201ENST00000343257 NCAPGQ9BPX3 1015 aa16.9■□□□□ 0.3
CLCN1-201ENST00000343257 YY1AP1Q9H869 796 aa16.9■□□□□ 0.3
CLCN1-201ENST00000343257 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.9■□□□□ 0.3
CLCN1-201ENST00000343257 PPFIA4O75335 1185 aa16.9■□□□□ 0.3
CLCN1-201ENST00000343257 APPP05067 770 aa16.9■□□□□ 0.3
CLCN1-201ENST00000343257 ZNF18P17022 549 aa16.9■□□□□ 0.3
CLCN1-201ENST00000343257 TADA2BQ86TJ2 420 aa16.9■□□□□ 0.3
CLCN1-201ENST00000343257 NUTM2AQ8IVF1 878 aaPredicted RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms