RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 EHMT1Q9H9B1 1298 aa9.09□□□□□ -0.95
UBE4B-202ENST00000343090 NRBP1Q9UHY1 535 aa9.09□□□□□ -0.95
UBE4B-202ENST00000343090 ZNF532Q9HCE3 1301 aa9.09□□□□□ -0.95
UBE4B-202ENST00000343090 SYNMO15061 1565 aa9.09□□□□□ -0.95
UBE4B-202ENST00000343090 LDHBP07195 334 aaKnown RBP9.09□□□□□ -0.95
UBE4B-202ENST00000343090 ERCC3P19447 782 aa9.09□□□□□ -0.95
UBE4B-202ENST00000343090 TLR7Q9NYK1 1049 aaKnown RBP9.09□□□□□ -0.95
UBE4B-202ENST00000343090 LUC7L2Q9Y383 392 aaKnown RBP9.09□□□□□ -0.95
UBE4B-202ENST00000343090 KRT86O43790 486 aa9.09□□□□□ -0.95
UBE4B-202ENST00000343090 ATP5JP18859 108 aa9.09□□□□□ -0.95
UBE4B-202ENST00000343090 EIF6P56537 245 aaKnown RBP9.09□□□□□ -0.95
UBE4B-202ENST00000343090 RILPL1Q5EBL4 403 aa9.09□□□□□ -0.95
UBE4B-202ENST00000343090 KRT79Q5XKE5 535 aa9.09□□□□□ -0.95
UBE4B-202ENST00000343090 OTUD6BQ8N6M0 293 aa9.09□□□□□ -0.95
UBE4B-202ENST00000343090 ERMNQ8TAM6 284 aa9.09□□□□□ -0.95
UBE4B-202ENST00000343090 TMEM87BQ96K49 555 aa9.09□□□□□ -0.95
UBE4B-202ENST00000343090 DEXIO95424 95 aa9.08□□□□□ -0.96
UBE4B-202ENST00000343090 KRT83P78385 493 aa9.08□□□□□ -0.96
UBE4B-202ENST00000343090 PNOCQ13519 176 aa9.08□□□□□ -0.96
UBE4B-202ENST00000343090 PLS1Q14651 629 aa9.08□□□□□ -0.96
UBE4B-202ENST00000343090 PPP4R3AQ6IN85 833 aa9.08□□□□□ -0.96
UBE4B-202ENST00000343090 TPTE2Q6XPS3 522 aa9.08□□□□□ -0.96
UBE4B-202ENST00000343090 RGS22Q8NE09 1264 aa9.08□□□□□ -0.96
UBE4B-202ENST00000343090 GOLGA6L10A0A0M3HER8 536 aa9.08□□□□□ -0.96
UBE4B-202ENST00000343090 PRAMEF22A3QJZ6 481 aa9.08□□□□□ -0.96
UBE4B-202ENST00000343090 TMEM110-MUSTN1A8MSY1 372 aa9.08□□□□□ -0.96
UBE4B-202ENST00000343090 FBXO38Q6PIJ6 1188 aa9.08□□□□□ -0.96
UBE4B-202ENST00000343090 TM6SF1Q9BZW5 370 aa9.08□□□□□ -0.96
UBE4B-202ENST00000343090 TFCP2L1Q9NZI6 479 aa9.08□□□□□ -0.96
UBE4B-202ENST00000343090 METP08581 1390 aa9.08□□□□□ -0.96
UBE4B-202ENST00000343090 CTNNA2P26232 953 aa9.08□□□□□ -0.96
UBE4B-202ENST00000343090 NLRP12P59046 1061 aa9.08□□□□□ -0.96
UBE4B-202ENST00000343090 ZRSR2Q15696 482 aaKnown RBP9.08□□□□□ -0.96
UBE4B-202ENST00000343090 CCDC122Q5T0U0 273 aa9.08□□□□□ -0.96
UBE4B-202ENST00000343090 TTLL7Q6ZT98 887 aa9.08□□□□□ -0.96
UBE4B-202ENST00000343090 STXBP4Q6ZWJ1 553 aa9.08□□□□□ -0.96
UBE4B-202ENST00000343090 SMARCC2Q8TAQ2 1214 aa9.08□□□□□ -0.96
UBE4B-202ENST00000343090 USP28Q96RU2 1077 aa9.08□□□□□ -0.96
UBE4B-202ENST00000343090 YEATS2Q9ULM3 1422 aa9.07□□□□□ -0.96
UBE4B-202ENST00000343090 GCOM1H8Y6P7 765 aaPredicted RBP9.07□□□□□ -0.96
UBE4B-202ENST00000343090 PDE8AO60658 829 aa9.07□□□□□ -0.96
UBE4B-202ENST00000343090 MYZAPP0CAP1 466 aa9.07□□□□□ -0.96
UBE4B-202ENST00000343090 SARNPP82979 210 aaKnown RBP9.07□□□□□ -0.96
UBE4B-202ENST00000343090 RAD51AP2Q09MP3 1159 aa9.07□□□□□ -0.96
UBE4B-202ENST00000343090 NAA30Q147X3 362 aaPredicted RBP9.07□□□□□ -0.96
UBE4B-202ENST00000343090 ZNF710Q8N1W2 664 aa9.07□□□□□ -0.96
UBE4B-202ENST00000343090 AFAP1L1Q8TED9 768 aa9.07□□□□□ -0.96
UBE4B-202ENST00000343090 IFT81Q8WYA0 676 aa9.07□□□□□ -0.96
UBE4B-202ENST00000343090 BICD1Q96G01 975 aa9.07□□□□□ -0.96
UBE4B-202ENST00000343090 LSG1Q9H089 658 aaKnown RBP9.07□□□□□ -0.96
UBE4B-202ENST00000343090 ZSWIM6Q9HCJ5 1215 aa9.07□□□□□ -0.96
UBE4B-202ENST00000343090 AATFQ9NY61 560 aaKnown RBP eCLIP9.07□□□□□ -0.966e-7■□□□□ 11.1
UBE4B-202ENST00000343090 SEC31AO94979 1220 aaKnown RBP9.07□□□□□ -0.96
UBE4B-202ENST00000343090 LRRC24Q50LG9 513 aa9.07□□□□□ -0.96
UBE4B-202ENST00000343090 GPCPD1Q9NPB8 672 aa9.07□□□□□ -0.96
UBE4B-202ENST00000343090 RBM28Q9NW13 759 aaKnown RBP9.07□□□□□ -0.96
UBE4B-202ENST00000343090 JRKLQ9Y4A0 524 aa9.07□□□□□ -0.96
UBE4B-202ENST00000343090 SH3TC1Q8TE82 1336 aa9.07□□□□□ -0.96
UBE4B-202ENST00000343090 EZRP15311 586 aaKnown RBP9.07□□□□□ -0.96
UBE4B-202ENST00000343090 MTX1Q13505 466 aa9.07□□□□□ -0.96
UBE4B-202ENST00000343090 KIAA0753Q2KHM9 967 aa9.07□□□□□ -0.96
UBE4B-202ENST00000343090 TTC6Q86TZ1 520 aa9.07□□□□□ -0.96
UBE4B-202ENST00000343090 MKRN1Q9UHC7 482 aaKnown RBP9.07□□□□□ -0.96
UBE4B-202ENST00000343090 NFE2L3Q9Y4A8 694 aa9.07□□□□□ -0.96
UBE4B-202ENST00000343090 KDRP35968 1356 aa9.07□□□□□ -0.96
UBE4B-202ENST00000343090 TARBP1Q13395 1621 aaKnown RBP9.07□□□□□ -0.96
UBE4B-202ENST00000343090 CUTAO60888 179 aa9.07□□□□□ -0.96
UBE4B-202ENST00000343090 CNGA4Q8IV77 575 aa9.07□□□□□ -0.96
UBE4B-202ENST00000343090 SPATA5Q8NB90 893 aa9.07□□□□□ -0.96
UBE4B-202ENST00000343090 XPO4Q9C0E2 1151 aaKnown RBP9.07□□□□□ -0.96
UBE4B-202ENST00000343090 TMEM51Q9NW97 253 aa9.07□□□□□ -0.96
UBE4B-202ENST00000343090 BICDL2A1A5D9 508 aa9.06□□□□□ -0.96
UBE4B-202ENST00000343090 LRRC8AQ8IWT6 810 aa9.06□□□□□ -0.96
UBE4B-202ENST00000343090 TBC1D5Q92609 795 aa9.06□□□□□ -0.96
UBE4B-202ENST00000343090 NYXQ9GZU5 481 aa9.06□□□□□ -0.96
UBE4B-202ENST00000343090 BLZF1Q9H2G9 400 aa9.06□□□□□ -0.96
UBE4B-202ENST00000343090 TAOK3Q9H2K8 898 aa9.06□□□□□ -0.96
UBE4B-202ENST00000343090 RABEP2Q9H5N1 569 aa9.06□□□□□ -0.96
UBE4B-202ENST00000343090 VPS54Q9P1Q0 977 aa9.06□□□□□ -0.96
UBE4B-202ENST00000343090 MORC2Q9Y6X9 1032 aaPredicted RBP9.06□□□□□ -0.96
UBE4B-202ENST00000343090 TMEM2Q9UHN6 1383 aa9.06□□□□□ -0.96
UBE4B-202ENST00000343090 GNPATO15228 680 aa9.06□□□□□ -0.96
UBE4B-202ENST00000343090 PARP1P09874 1014 aaKnown RBP9.06□□□□□ -0.96
UBE4B-202ENST00000343090 DESP17661 470 aa9.06□□□□□ -0.96
UBE4B-202ENST00000343090 INPP5BP32019 993 aa9.06□□□□□ -0.96
UBE4B-202ENST00000343090 ICE2Q659A1 982 aa9.06□□□□□ -0.96
UBE4B-202ENST00000343090 MRVI1Q9Y6F6 885 aa9.06□□□□□ -0.96
UBE4B-202ENST00000343090 SYNRGQ9UMZ2 1314 aa9.06□□□□□ -0.96
UBE4B-202ENST00000343090 MYO5CQ9NQX4 1742 aa9.06□□□□□ -0.96
UBE4B-202ENST00000343090 MYOM2P54296 1465 aa9.06□□□□□ -0.96
UBE4B-202ENST00000343090 MYO1CO00159 1063 aa9.06□□□□□ -0.96
UBE4B-202ENST00000343090 KRT13P13646 458 aa9.06□□□□□ -0.96
UBE4B-202ENST00000343090 GJC1P36383 396 aa9.06□□□□□ -0.96
UBE4B-202ENST00000343090 PDE4DQ08499 809 aa9.06□□□□□ -0.96
UBE4B-202ENST00000343090 NAA25Q14CX7 972 aa9.06□□□□□ -0.96
UBE4B-202ENST00000343090 E2F4Q16254 413 aa9.06□□□□□ -0.96
UBE4B-202ENST00000343090 IFI16Q16666 785 aaKnown RBP9.06□□□□□ -0.96
UBE4B-202ENST00000343090 TTC38Q5R3I4 469 aa9.06□□□□□ -0.96
UBE4B-202ENST00000343090 AKNAD1Q5T1N1 836 aa9.06□□□□□ -0.96
UBE4B-202ENST00000343090 ATRIPQ8WXE1 791 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms