RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 SUSD4Q5VX71 490 aa16.85■□□□□ 0.29
TDP2-201ENST00000341060 MAP3K14Q99558 947 aa16.85■□□□□ 0.29
TDP2-201ENST00000341060 ZSWIM5Q9P217 1185 aa16.85■□□□□ 0.29
TDP2-201ENST00000341060 HPSEQ9Y251 543 aa16.85■□□□□ 0.29
TDP2-201ENST00000341060 FAM237AA0A1B0GTK4 181 aa16.84■□□□□ 0.29
TDP2-201ENST00000341060 SMTNL1A8MU46 457 aa16.84■□□□□ 0.29
TDP2-201ENST00000341060 SKILP12757 684 aa16.84■□□□□ 0.29
TDP2-201ENST00000341060 GSDMDP57764 484 aa16.84■□□□□ 0.29
TDP2-201ENST00000341060 CCZ1BP86790 482 aa16.84■□□□□ 0.29
TDP2-201ENST00000341060 CCZ1P86791 482 aaPredicted RBP16.84■□□□□ 0.29
TDP2-201ENST00000341060 GNL2Q13823 731 aaKnown RBP16.84■□□□□ 0.29
TDP2-201ENST00000341060 DDB1Q16531 1140 aa16.84■□□□□ 0.29
TDP2-201ENST00000341060 TPD52L1Q16890 204 aaPredicted RBP16.84■□□□□ 0.29
TDP2-201ENST00000341060 AKNAD1Q5T1N1 836 aa16.84■□□□□ 0.29
TDP2-201ENST00000341060 FILIP1Q7Z7B0 1213 aa16.84■□□□□ 0.29
TDP2-201ENST00000341060 NBPF11Q86T75 865 aa16.84■□□□□ 0.29
TDP2-201ENST00000341060 OSBPL5Q9H0X9 879 aaPredicted RBP16.84■□□□□ 0.29
TDP2-201ENST00000341060 IMPACTQ9P2X3 320 aa16.84■□□□□ 0.29
TDP2-201ENST00000341060 SLC12A7Q9Y666 1083 aa16.84■□□□□ 0.29
TDP2-201ENST00000341060 CCDC69A6NI79 296 aa16.84■□□□□ 0.29
TDP2-201ENST00000341060 GSG1L2A8MUP6 293 aa16.84■□□□□ 0.29
TDP2-201ENST00000341060 SYKP43405 635 aa16.84■□□□□ 0.29
TDP2-201ENST00000341060 CTDSPL2Q05D32 466 aa16.84■□□□□ 0.29
TDP2-201ENST00000341060 TRIM29Q14134 588 aa16.84■□□□□ 0.29
TDP2-201ENST00000341060 MYL10Q9BUA6 226 aa16.84■□□□□ 0.29
TDP2-201ENST00000341060 KRT23Q9C075 422 aa16.84■□□□□ 0.29
TDP2-201ENST00000341060 ARMT1Q9H993 441 aa16.84■□□□□ 0.29
TDP2-201ENST00000341060 PAXBP1Q9Y5B6 917 aa16.84■□□□□ 0.29
TDP2-201ENST00000341060 PNPLA7Q6ZV29 1317 aa16.84■□□□□ 0.29
TDP2-201ENST00000341060 RTL9Q8NET4 1388 aa16.84■□□□□ 0.29
TDP2-201ENST00000341060 FAM177BA6PVY3 158 aa16.83■□□□□ 0.28
TDP2-201ENST00000341060 IFIT3O14879 490 aaKnown RBP16.83■□□□□ 0.28
TDP2-201ENST00000341060 GNAT2P19087 354 aa16.83■□□□□ 0.28
TDP2-201ENST00000341060 UTP14AQ9BVJ6 771 aaKnown RBP16.83■□□□□ 0.28
TDP2-201ENST00000341060 INCENPQ9NQS7 918 aa16.83■□□□□ 0.28
TDP2-201ENST00000341060 SEC31BQ9NQW1 1179 aa16.83■□□□□ 0.28
TDP2-201ENST00000341060 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.83■□□□□ 0.28
TDP2-201ENST00000341060 CCDC87Q9NVE4 849 aa16.83■□□□□ 0.28
TDP2-201ENST00000341060 TUBE1Q9UJT0 475 aa16.83■□□□□ 0.28
TDP2-201ENST00000341060 MYH2Q9UKX2 1941 aa16.83■□□□□ 0.28
TDP2-201ENST00000341060 SNAP23O00161 211 aa16.82■□□□□ 0.28
TDP2-201ENST00000341060 VPS72Q15906 364 aa16.82■□□□□ 0.28
TDP2-201ENST00000341060 INTS5Q6P9B9 1019 aaKnown RBP16.82■□□□□ 0.28
TDP2-201ENST00000341060 SHC4Q6S5L8 630 aa16.82■□□□□ 0.28
TDP2-201ENST00000341060 MFSD6Q6ZSS7 791 aa16.82■□□□□ 0.28
TDP2-201ENST00000341060 STAG1Q8WVM7 1258 aa16.82■□□□□ 0.28
TDP2-201ENST00000341060 CCDC94Q9BW85 323 aaPredicted RBP16.82■□□□□ 0.28
TDP2-201ENST00000341060 KCND1Q9NSA2 647 aa16.82■□□□□ 0.28
TDP2-201ENST00000341060 TACC3Q9Y6A5 838 aa16.82■□□□□ 0.28
TDP2-201ENST00000341060 COL5A3P25940 1745 aaPredicted RBP16.82■□□□□ 0.28
TDP2-201ENST00000341060 BIN1O00499 593 aa16.82■□□□□ 0.28
TDP2-201ENST00000341060 IKBKBO14920 756 aa16.82■□□□□ 0.28
TDP2-201ENST00000341060 FMNL1O95466 1100 aaPredicted RBP16.82■□□□□ 0.28
TDP2-201ENST00000341060 IFNAR1P17181 557 aa16.82■□□□□ 0.28
TDP2-201ENST00000341060 SSRP1Q08945 709 aaKnown RBP16.82■□□□□ 0.28
TDP2-201ENST00000341060 NCAPHQ15003 741 aa16.82■□□□□ 0.28
TDP2-201ENST00000341060 CCDC152Q4G0S7 254 aa16.82■□□□□ 0.28
TDP2-201ENST00000341060 PARP10Q53GL7 1025 aa16.82■□□□□ 0.28
TDP2-201ENST00000341060 RESP18Q5W5W9 173 aa16.82■□□□□ 0.28
TDP2-201ENST00000341060 ANKRD7Q92527 254 aa16.82■□□□□ 0.28
TDP2-201ENST00000341060 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.82■□□□□ 0.28
TDP2-201ENST00000341060 CDCA7Q9BWT1 371 aaPredicted RBP16.82■□□□□ 0.28
TDP2-201ENST00000341060 A0A0G2JS52 829 aa16.81■□□□□ 0.28
TDP2-201ENST00000341060 TPM4P67936 248 aa16.81■□□□□ 0.28
TDP2-201ENST00000341060 BARGINQ6ZT62 677 aa16.81■□□□□ 0.28
TDP2-201ENST00000341060 NYAP1Q6ZVC0 841 aa16.81■□□□□ 0.28
TDP2-201ENST00000341060 WASF1Q92558 559 aa16.81■□□□□ 0.28
TDP2-201ENST00000341060 MTA3Q9BTC8 594 aa16.81■□□□□ 0.28
TDP2-201ENST00000341060 SLC26A6Q9BXS9 759 aa16.81■□□□□ 0.28
TDP2-201ENST00000341060 NACAP1Q9BZK3 213 aa16.81■□□□□ 0.28
TDP2-201ENST00000341060 BAZ2AQ9UIF9 1905 aaKnown RBP16.81■□□□□ 0.28
TDP2-201ENST00000341060 USP27XA6NNY8 438 aa16.81■□□□□ 0.28
TDP2-201ENST00000341060 CRKLP46109 303 aaKnown RBP16.81■□□□□ 0.28
TDP2-201ENST00000341060 SYCP1Q15431 976 aa16.81■□□□□ 0.28
TDP2-201ENST00000341060 LCORLQ8N3X6 602 aa16.81■□□□□ 0.28
TDP2-201ENST00000341060 XPO4Q9C0E2 1151 aaKnown RBP16.81■□□□□ 0.28
TDP2-201ENST00000341060 MYH13Q9UKX3 1938 aa16.8■□□□□ 0.28
TDP2-201ENST00000341060 TAF1P21675 1872 aa16.8■□□□□ 0.28
TDP2-201ENST00000341060 CACNA1SQ13698 1873 aa16.8■□□□□ 0.28
TDP2-201ENST00000341060 AFF2P51816 1311 aa16.8■□□□□ 0.28
TDP2-201ENST00000341060 CUTAO60888 179 aa16.8■□□□□ 0.28
TDP2-201ENST00000341060 CAMTA2O94983 1202 aa16.8■□□□□ 0.28
TDP2-201ENST00000341060 IGHMBP2P38935 993 aaKnown RBP16.8■□□□□ 0.28
TDP2-201ENST00000341060 TDO2P48775 406 aa16.8■□□□□ 0.28
TDP2-201ENST00000341060 BCAMP50895 628 aa16.8■□□□□ 0.28
TDP2-201ENST00000341060 SART3Q15020 963 aaKnown RBP16.8■□□□□ 0.28
TDP2-201ENST00000341060 CEP135Q66GS9 1140 aa16.8■□□□□ 0.28
TDP2-201ENST00000341060 NOSTRINQ8IVI9 506 aa16.8■□□□□ 0.28
TDP2-201ENST00000341060 IFNKQ9P0W0 207 aa16.8■□□□□ 0.28
TDP2-201ENST00000341060 SLC4A4Q9Y6R1 1079 aa16.8■□□□□ 0.28
TDP2-201ENST00000341060 COL4A1P02462 1669 aa16.8■□□□□ 0.28
TDP2-201ENST00000341060 DLEC1Q9Y238 1755 aa16.8■□□□□ 0.28
TDP2-201ENST00000341060 UBE2Q2LH0YL09 131 aa16.79■□□□□ 0.28
TDP2-201ENST00000341060 PRKAB2O43741 272 aa16.79■□□□□ 0.28
TDP2-201ENST00000341060 SCN7AQ01118 1682 aa16.79■□□□□ 0.28
TDP2-201ENST00000341060 SMC2O95347 1197 aa16.79■□□□□ 0.28
TDP2-201ENST00000341060 NTSR2O95665 410 aa16.79■□□□□ 0.28
TDP2-201ENST00000341060 MMP1P03956 469 aa16.79■□□□□ 0.28
TDP2-201ENST00000341060 ATP6V1AP38606 617 aa16.79■□□□□ 0.28
TDP2-201ENST00000341060 RCAN1P53805 252 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms