RNA–Protein interactions for RNA: ENST00000340623.4

C2orf88-201, Transcript of chromosome 2 open reading frame 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C2orf88, Length 4,035 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-201ENST00000340623 C8orf76Q96K31 380 aa13.68□□□□□ -0.22
C2orf88-201ENST00000340623 CACNA1FO60840 1977 aa13.68□□□□□ -0.22
C2orf88-201ENST00000340623 NWD2Q9ULI1 1742 aa13.68□□□□□ -0.22
C2orf88-201ENST00000340623 SKOR2Q2VWA4 1001 aaPredicted RBP13.68□□□□□ -0.22
C2orf88-201ENST00000340623 HOMER1Q86YM7 354 aa13.68□□□□□ -0.22
C2orf88-201ENST00000340623 CACNB3P54284 484 aa13.68□□□□□ -0.22
C2orf88-201ENST00000340623 PRKG1Q13976 671 aa13.68□□□□□ -0.22
C2orf88-201ENST00000340623 CIAPIN1Q6FI81 312 aa13.68□□□□□ -0.22
C2orf88-201ENST00000340623 SYAP1Q96A49 352 aaPredicted RBP13.68□□□□□ -0.22
C2orf88-201ENST00000340623 STRBPQ96SI9 672 aaKnown RBP13.68□□□□□ -0.22
C2orf88-201ENST00000340623 MYL10Q9BUA6 226 aa13.68□□□□□ -0.22
C2orf88-201ENST00000340623 MXD3Q9BW11 206 aa13.68□□□□□ -0.22
C2orf88-201ENST00000340623 LRRC37A3O60309 1634 aa13.68□□□□□ -0.22
C2orf88-201ENST00000340623 KDM3BQ7LBC6 1761 aa13.68□□□□□ -0.22
C2orf88-201ENST00000340623 TNNI2P48788 182 aa13.68□□□□□ -0.22
C2orf88-201ENST00000340623 RTN1Q16799 776 aa13.68□□□□□ -0.22
C2orf88-201ENST00000340623 FBXO33Q7Z6M2 555 aa13.68□□□□□ -0.22
C2orf88-201ENST00000340623 CERS3Q8IU89 383 aa13.68□□□□□ -0.22
C2orf88-201ENST00000340623 HMGN5P82970 282 aaKnown RBP13.67□□□□□ -0.22
C2orf88-201ENST00000340623 TNIP1Q15025 636 aa13.67□□□□□ -0.22
C2orf88-201ENST00000340623 TMTC2Q8N394 836 aa13.67□□□□□ -0.22
C2orf88-201ENST00000340623 GLI3P10071 1580 aa13.67□□□□□ -0.22
C2orf88-201ENST00000340623 FGFR2P21802 821 aa13.67□□□□□ -0.22
C2orf88-201ENST00000340623 SSRP1Q08945 709 aaKnown RBP13.67□□□□□ -0.22
C2orf88-201ENST00000340623 RAB3GAP1Q15042 981 aa13.67□□□□□ -0.22
C2orf88-201ENST00000340623 NCOA5Q9HCD5 579 aaKnown RBP13.67□□□□□ -0.22
C2orf88-201ENST00000340623 CIZ1Q9ULV3 898 aaPredicted RBP13.67□□□□□ -0.22
C2orf88-201ENST00000340623 TFAP4Q01664 338 aa13.67□□□□□ -0.22
C2orf88-201ENST00000340623 ARPP21Q9UBL0 812 aaPredicted RBP13.67□□□□□ -0.22
C2orf88-201ENST00000340623 ABCA3Q99758 1704 aa13.66□□□□□ -0.22
C2orf88-201ENST00000340623 KIF5BP33176 963 aa13.66□□□□□ -0.22
C2orf88-201ENST00000340623 SEC63Q9UGP8 760 aaKnown RBP13.66□□□□□ -0.22
C2orf88-201ENST00000340623 USP17L8P0C7I0 530 aa13.66□□□□□ -0.22
C2orf88-201ENST00000340623 PANK2Q9BZ23 570 aa13.66□□□□□ -0.22
C2orf88-201ENST00000340623 ANGEL1Q9UNK9 670 aaKnown RBP13.66□□□□□ -0.22
C2orf88-201ENST00000340623 WASF1Q92558 559 aa13.66□□□□□ -0.22
C2orf88-201ENST00000340623 IL25Q9H293 177 aa13.66□□□□□ -0.22
C2orf88-201ENST00000340623 ATP8A2Q9NTI2 1148 aa13.66□□□□□ -0.22
C2orf88-201ENST00000340623 STK38Q15208 465 aa13.65□□□□□ -0.22
C2orf88-201ENST00000340623 DPY19L2Q6NUT2 758 aa13.65□□□□□ -0.22
C2orf88-201ENST00000340623 EPB41L2O43491 1005 aaKnown RBP13.65□□□□□ -0.22
C2orf88-201ENST00000340623 EAPPQ56P03 285 aaPredicted RBP13.65□□□□□ -0.22
C2orf88-201ENST00000340623 SH3RF3Q8TEJ3 882 aaPredicted RBP13.65□□□□□ -0.22
C2orf88-201ENST00000340623 SALL3Q9BXA9 1300 aa13.65□□□□□ -0.22
C2orf88-201ENST00000340623 HOXA10P31260 410 aaPredicted RBP13.64□□□□□ -0.23
C2orf88-201ENST00000340623 NASPP49321 788 aaPredicted RBP13.64□□□□□ -0.23
C2orf88-201ENST00000340623 CHAMP1Q96JM3 812 aa13.64□□□□□ -0.23
C2orf88-201ENST00000340623 ZBTB12Q9Y330 459 aaPredicted RBP13.64□□□□□ -0.23
C2orf88-201ENST00000340623 TM6SF1Q9BZW5 370 aa13.64□□□□□ -0.23
C2orf88-201ENST00000340623 ZNF408Q9H9D4 720 aa13.64□□□□□ -0.23
C2orf88-201ENST00000340623 STX6O43752 255 aa13.64□□□□□ -0.23
C2orf88-201ENST00000340623 CRKP46108 304 aa13.64□□□□□ -0.23
C2orf88-201ENST00000340623 KRT85P78386 507 aa13.64□□□□□ -0.23
C2orf88-201ENST00000340623 NECTIN1Q15223 517 aa13.64□□□□□ -0.23
C2orf88-201ENST00000340623 NSUN4Q96CB9 384 aaKnown RBP13.64□□□□□ -0.23
C2orf88-201ENST00000340623 TMEM87BQ96K49 555 aa13.64□□□□□ -0.23
C2orf88-201ENST00000340623 RTL9Q8NET4 1388 aa13.64□□□□□ -0.23
C2orf88-201ENST00000340623 CFAP100Q494V2 611 aa13.63□□□□□ -0.23
C2orf88-201ENST00000340623 VGLL2Q8N8G2 317 aa13.63□□□□□ -0.23
C2orf88-201ENST00000340623 TDRD7Q8NHU6 1098 aaKnown RBP13.63□□□□□ -0.23
C2orf88-201ENST00000340623 CCAR1Q8IX12 1150 aaKnown RBP13.63□□□□□ -0.23
C2orf88-201ENST00000340623 DYNLL2Q96FJ2 89 aa13.63□□□□□ -0.23
C2orf88-201ENST00000340623 TDRD3Q9H7E2 651 aaKnown RBP13.63□□□□□ -0.23
C2orf88-201ENST00000340623 RNF181Q9P0P0 153 aa13.63□□□□□ -0.23
C2orf88-201ENST00000340623 CYP2D6P10635 497 aa13.63□□□□□ -0.23
C2orf88-201ENST00000340623 MRE11P49959 708 aa13.63□□□□□ -0.23
C2orf88-201ENST00000340623 ZYXQ15942 572 aaKnown RBP13.63□□□□□ -0.23
C2orf88-201ENST00000340623 CCDC34Q96HJ3 373 aa13.63□□□□□ -0.23
C2orf88-201ENST00000340623 ZNF396Q96N95 335 aaPredicted RBP13.63□□□□□ -0.23
C2orf88-201ENST00000340623 INCENPQ9NQS7 918 aa13.63□□□□□ -0.23
C2orf88-201ENST00000340623 CCDC178Q5BJE1 867 aa13.62□□□□□ -0.23
C2orf88-201ENST00000340623 ZNF512BQ96KM6 892 aaPredicted RBP13.62□□□□□ -0.23
C2orf88-201ENST00000340623 GRPEL1Q9HAV7 217 aa13.62□□□□□ -0.23
C2orf88-201ENST00000340623 ZSWIM6Q9HCJ5 1215 aa13.62□□□□□ -0.23
C2orf88-201ENST00000340623 PTPDC1A2A3K4 754 aa13.62□□□□□ -0.23
C2orf88-201ENST00000340623 CD2BP2O95400 341 aaKnown RBP13.62□□□□□ -0.23
C2orf88-201ENST00000340623 UPF1Q92900 1129 aaKnown RBP eCLIP13.62□□□□□ -0.237e-7■■■■□ 20.8
C2orf88-201ENST00000340623 NLRP5P59047 1200 aa13.62□□□□□ -0.23
C2orf88-201ENST00000340623 GRIPAP1Q4V328 841 aa13.62□□□□□ -0.23
C2orf88-201ENST00000340623 PAXIP1Q6ZW49 1069 aaPredicted RBP13.62□□□□□ -0.23
C2orf88-201ENST00000340623 ALG1Q9BT22 464 aa13.62□□□□□ -0.23
C2orf88-201ENST00000340623 ME1P48163 572 aa13.61□□□□□ -0.23
C2orf88-201ENST00000340623 CCDC73Q6ZRK6 1079 aa13.61□□□□□ -0.23
C2orf88-201ENST00000340623 RBM27Q9P2N5 1060 aaKnown RBP13.61□□□□□ -0.23
C2orf88-201ENST00000340623 TFIP11Q9UBB9 837 aaKnown RBP13.61□□□□□ -0.23
C2orf88-201ENST00000340623 TGFB2P61812 414 aa13.61□□□□□ -0.23
C2orf88-201ENST00000340623 TBC1D10BQ4KMP7 808 aaPredicted RBP13.61□□□□□ -0.23
C2orf88-201ENST00000340623 ZNRF3Q9ULT6 936 aa13.61□□□□□ -0.23
C2orf88-201ENST00000340623 MROH7-TTC4A0A0A0MT08 1334 aa13.61□□□□□ -0.23
C2orf88-201ENST00000340623 NF2P35240 595 aa13.61□□□□□ -0.23
C2orf88-201ENST00000340623 CSRNP1Q96S65 589 aa13.61□□□□□ -0.23
C2orf88-201ENST00000340623 TCEAL9Q9UHQ7 104 aa13.61□□□□□ -0.23
C2orf88-201ENST00000340623 TNKSO95271 1327 aa13.61□□□□□ -0.23
C2orf88-201ENST00000340623 PDE4CQ08493 712 aa13.61□□□□□ -0.23
C2orf88-201ENST00000340623 ME3Q16798 604 aa13.61□□□□□ -0.23
C2orf88-201ENST00000340623 CRY2Q49AN0 593 aa13.61□□□□□ -0.23
C2orf88-201ENST00000340623 C5P01031 1676 aa13.6□□□□□ -0.23
C2orf88-201ENST00000340623 ZNF526Q8TF50 670 aaPredicted RBP13.6□□□□□ -0.23
C2orf88-201ENST00000340623 SYCE3A1L190 88 aa13.6□□□□□ -0.23
C2orf88-201ENST00000340623 TNFAIP1Q13829 316 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms