RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 MAP4K4O95819 1239 aaPredicted RBP17.83■□□□□ 0.44
ERCC1-203ENST00000340192 INHBEP58166 350 aa17.83■□□□□ 0.44
ERCC1-203ENST00000340192 SH3BP5LQ7L8J4 393 aa17.83■□□□□ 0.44
ERCC1-203ENST00000340192 ADGRA1Q86SQ6 560 aa17.83■□□□□ 0.44
ERCC1-203ENST00000340192 ZSCAN29Q8IWY8 852 aaPredicted RBP17.83■□□□□ 0.44
ERCC1-203ENST00000340192 NOL10Q9BSC4 688 aaKnown RBP17.83■□□□□ 0.44
ERCC1-203ENST00000340192 SNCAIPQ9Y6H5 919 aa17.83■□□□□ 0.44
ERCC1-203ENST00000340192 ATRNL1Q5VV63 1379 aa17.82■□□□□ 0.44
ERCC1-203ENST00000340192 DDTLA6NHG4 134 aaPredicted RBP17.82■□□□□ 0.44
ERCC1-203ENST00000340192 IGSF3O75054 1194 aa17.82■□□□□ 0.44
ERCC1-203ENST00000340192 IDH1O75874 414 aaKnown RBP17.82■□□□□ 0.44
ERCC1-203ENST00000340192 TBC1D8O95759 1140 aa17.82■□□□□ 0.44
ERCC1-203ENST00000340192 INPP5BP32019 993 aa17.82■□□□□ 0.44
ERCC1-203ENST00000340192 IFNL1Q8IU54 200 aa17.82■□□□□ 0.44
ERCC1-203ENST00000340192 SH3RF3Q8TEJ3 882 aaPredicted RBP17.82■□□□□ 0.44
ERCC1-203ENST00000340192 OTUD5Q96G74 571 aa17.82■□□□□ 0.44
ERCC1-203ENST00000340192 LRRCC1Q9C099 1032 aa17.82■□□□□ 0.44
ERCC1-203ENST00000340192 ANTXR1Q9H6X2 564 aa17.82■□□□□ 0.44
ERCC1-203ENST00000340192 AATFQ9NY61 560 aaKnown RBP eCLIP17.82■□□□□ 0.44
ERCC1-203ENST00000340192 NPM3O75607 178 aaKnown RBP17.81■□□□□ 0.44
ERCC1-203ENST00000340192 BAG3O95817 575 aa17.81■□□□□ 0.44
ERCC1-203ENST00000340192 ERO1BQ86YB8 467 aa17.81■□□□□ 0.44
ERCC1-203ENST00000340192 TEX11Q8IYF3 940 aa17.81■□□□□ 0.44
ERCC1-203ENST00000340192 ZNF112Q9UJU3 913 aa17.81■□□□□ 0.44
ERCC1-203ENST00000340192 SPDYE5A6NIY4 337 aa17.8■□□□□ 0.44
ERCC1-203ENST00000340192 IGF2BP3O00425 579 aaKnown RBP eCLIP17.8■□□□□ 0.44
ERCC1-203ENST00000340192 SMARCA5O60264 1052 aaPredicted RBP17.8■□□□□ 0.44
ERCC1-203ENST00000340192 PPP4CP60510 307 aa17.8■□□□□ 0.44
ERCC1-203ENST00000340192 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.8■□□□□ 0.44
ERCC1-203ENST00000340192 MS4A4AQ96JQ5 239 aa17.8■□□□□ 0.44
ERCC1-203ENST00000340192 DCTPP1Q9H773 170 aa17.8■□□□□ 0.44
ERCC1-203ENST00000340192 PCDHB15Q9Y5E8 787 aa17.8■□□□□ 0.44
ERCC1-203ENST00000340192 COL2A1P02458 1487 aaPredicted RBP17.8■□□□□ 0.44
ERCC1-203ENST00000340192 TESPA1A2RU30 521 aaPredicted RBP17.79■□□□□ 0.44
ERCC1-203ENST00000340192 ALDH1A1P00352 501 aa17.79■□□□□ 0.44
ERCC1-203ENST00000340192 PLCG2P16885 1265 aa17.79■□□□□ 0.44
ERCC1-203ENST00000340192 CYP7A1P22680 504 aa17.79■□□□□ 0.44
ERCC1-203ENST00000340192 GTF2A2P52657 109 aa17.79■□□□□ 0.44
ERCC1-203ENST00000340192 MAP3K12Q12852 859 aa17.79■□□□□ 0.44
ERCC1-203ENST00000340192 MAGEB6Q8N7X4 407 aa17.79■□□□□ 0.44
ERCC1-203ENST00000340192 CRBNQ96SW2 442 aa17.79■□□□□ 0.44
ERCC1-203ENST00000340192 OSBPL5Q9H0X9 879 aaPredicted RBP17.79■□□□□ 0.44
ERCC1-203ENST00000340192 DOCK1Q14185 1865 aa17.78■□□□□ 0.44
ERCC1-203ENST00000340192 PHF20L1A8MW92 1017 aa17.78■□□□□ 0.44
ERCC1-203ENST00000340192 SLURP2P0DP57 97 aa17.78■□□□□ 0.44
ERCC1-203ENST00000340192 MAP3K10Q02779 954 aa17.78■□□□□ 0.44
ERCC1-203ENST00000340192 TTF1Q15361 905 aaPredicted RBP17.78■□□□□ 0.44
ERCC1-203ENST00000340192 DNAJC2Q99543 621 aaKnown RBP17.78■□□□□ 0.44
ERCC1-203ENST00000340192 PTPN18Q99952 460 aa17.78■□□□□ 0.44
ERCC1-203ENST00000340192 CFHR5Q9BXR6 569 aa17.78■□□□□ 0.44
ERCC1-203ENST00000340192 R3HDMLQ9H3Y0 253 aa17.78■□□□□ 0.44
ERCC1-203ENST00000340192 SIPA1L1O43166 1804 aa17.77■□□□□ 0.44
ERCC1-203ENST00000340192 CCL15-CCL14A0A0B4J2E2 113 aa17.77■□□□□ 0.44
ERCC1-203ENST00000340192 GOLIM4O00461 696 aa17.77■□□□□ 0.44
ERCC1-203ENST00000340192 IRF6O14896 467 aa17.77■□□□□ 0.44
ERCC1-203ENST00000340192 ATP5JP18859 108 aa17.77■□□□□ 0.44
ERCC1-203ENST00000340192 DYNLL1P63167 89 aaKnown RBP17.77■□□□□ 0.44
ERCC1-203ENST00000340192 PPATQ06203 517 aa17.77■□□□□ 0.44
ERCC1-203ENST00000340192 PPIL2Q13356 520 aa17.77■□□□□ 0.44
ERCC1-203ENST00000340192 CCL15Q16663 113 aa17.77■□□□□ 0.44
ERCC1-203ENST00000340192 NOL9Q5SY16 702 aaKnown RBP17.77■□□□□ 0.44
ERCC1-203ENST00000340192 OTUD7BQ6GQQ9 843 aa17.77■□□□□ 0.44
ERCC1-203ENST00000340192 MIGA1Q8NAN2 632 aa17.77■□□□□ 0.44
ERCC1-203ENST00000340192 BRI3BPQ8WY22 251 aa17.77■□□□□ 0.44
ERCC1-203ENST00000340192 ATAD5Q96QE3 1844 aa17.77■□□□□ 0.43
ERCC1-203ENST00000340192 MYH1P12882 1939 aa17.76■□□□□ 0.43
ERCC1-203ENST00000340192 CAPN15O75808 1086 aa17.76■□□□□ 0.43
ERCC1-203ENST00000340192 TMED8Q6PL24 325 aaPredicted RBP17.76■□□□□ 0.43
ERCC1-203ENST00000340192 TGFBRAP1Q8WUH2 860 aa17.76■□□□□ 0.43
ERCC1-203ENST00000340192 ZNF296Q8WUU4 475 aaPredicted RBP17.76■□□□□ 0.43
ERCC1-203ENST00000340192 BOLA2Q9H3K6 86 aa17.76■□□□□ 0.43
ERCC1-203ENST00000340192 MYH7P12883 1935 aa17.76■□□□□ 0.43
ERCC1-203ENST00000340192 FLT1P17948 1338 aa17.75■□□□□ 0.43
ERCC1-203ENST00000340192 PHIPQ8WWQ0 1821 aa17.75■□□□□ 0.43
ERCC1-203ENST00000340192 GPR25O00155 361 aa17.75■□□□□ 0.43
ERCC1-203ENST00000340192 TBC1D12O60347 775 aa17.75■□□□□ 0.43
ERCC1-203ENST00000340192 CETPP11597 493 aa17.75■□□□□ 0.43
ERCC1-203ENST00000340192 SNAPC2Q13487 334 aa17.75■□□□□ 0.43
ERCC1-203ENST00000340192 DGKZQ13574 1117 aa17.75■□□□□ 0.43
ERCC1-203ENST00000340192 NOM1Q5C9Z4 860 aaKnown RBP17.75■□□□□ 0.43
ERCC1-203ENST00000340192 SLC9C2Q5TAH2 1124 aa17.75■□□□□ 0.43
ERCC1-203ENST00000340192 MAPKAPK5Q8IW41 473 aa17.75■□□□□ 0.43
ERCC1-203ENST00000340192 EDC3Q96F86 508 aaKnown RBP17.75■□□□□ 0.43
ERCC1-203ENST00000340192 MCOLN1Q9GZU1 580 aa17.75■□□□□ 0.43
ERCC1-203ENST00000340192 PAG1Q9NWQ8 432 aa17.75■□□□□ 0.43
ERCC1-203ENST00000340192 FAM196BA6NMK8 535 aa17.74■□□□□ 0.43
ERCC1-203ENST00000340192 PDE6AP16499 860 aa17.74■□□□□ 0.43
ERCC1-203ENST00000340192 CRHR2Q13324 411 aa17.74■□□□□ 0.43
ERCC1-203ENST00000340192 CERS3Q8IU89 383 aa17.74■□□□□ 0.43
ERCC1-203ENST00000340192 SCYL3Q8IZE3 742 aa17.74■□□□□ 0.43
ERCC1-203ENST00000340192 ABHD8Q96I13 439 aa17.74■□□□□ 0.43
ERCC1-203ENST00000340192 HAUS7Q99871 368 aa17.74■□□□□ 0.43
ERCC1-203ENST00000340192 DHX36Q9H2U1 1008 aaKnown RBP17.74■□□□□ 0.43
ERCC1-203ENST00000340192 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.74■□□□□ 0.43
ERCC1-203ENST00000340192 CTNND1O60716 968 aaKnown RBP17.73■□□□□ 0.43
ERCC1-203ENST00000340192 PICK1Q9NRD5 415 aa17.73■□□□□ 0.43
ERCC1-203ENST00000340192 PTPRFP10586 1907 aa17.72■□□□□ 0.43
ERCC1-203ENST00000340192 FKTNO75072 461 aa17.72■□□□□ 0.43
ERCC1-203ENST00000340192 PTPRAP18433 802 aa17.72■□□□□ 0.43
ERCC1-203ENST00000340192 FAM43AQ8N2R8 423 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms