RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 ARHGAP6O43182 974 aa10.93□□□□□ -0.66
PTCHD4-201ENST00000339488 ATP6V1G1O75348 118 aa10.93□□□□□ -0.66
PTCHD4-201ENST00000339488 SMNDC1O75940 238 aaKnown RBP eCLIP10.93□□□□□ -0.66
PTCHD4-201ENST00000339488 CDKL5O76039 1030 aa10.93□□□□□ -0.66
PTCHD4-201ENST00000339488 CTAGE8P0CG41 777 aa10.93□□□□□ -0.66
PTCHD4-201ENST00000339488 NCAPHQ15003 741 aa10.93□□□□□ -0.66
PTCHD4-201ENST00000339488 CTAGE6Q86UF2 777 aa10.93□□□□□ -0.66
PTCHD4-201ENST00000339488 CTAGE4Q8IX94 777 aa10.93□□□□□ -0.66
PTCHD4-201ENST00000339488 ARL8AQ96BM9 186 aa10.93□□□□□ -0.66
PTCHD4-201ENST00000339488 IL17RAQ96F46 866 aa10.93□□□□□ -0.66
PTCHD4-201ENST00000339488 MYO1AQ9UBC5 1043 aa10.93□□□□□ -0.66
PTCHD4-201ENST00000339488 ANAPC4Q9UJX5 808 aa10.93□□□□□ -0.66
PTCHD4-201ENST00000339488 MAPK8IP1Q9UQF2 711 aa10.93□□□□□ -0.66
PTCHD4-201ENST00000339488 UNC13BO14795 1591 aa10.93□□□□□ -0.66
PTCHD4-201ENST00000339488 ADGRB2O60241 1585 aa10.93□□□□□ -0.66
PTCHD4-201ENST00000339488 ARHGAP25P42331 645 aa10.93□□□□□ -0.66
PTCHD4-201ENST00000339488 SLC8A3P57103 927 aa10.93□□□□□ -0.66
PTCHD4-201ENST00000339488 FAM160A1Q05DH4 1040 aa10.93□□□□□ -0.66
PTCHD4-201ENST00000339488 SLC4A10Q6U841 1118 aa10.93□□□□□ -0.66
PTCHD4-201ENST00000339488 SLC35F6Q8N357 371 aa10.93□□□□□ -0.66
PTCHD4-201ENST00000339488 MAB21L3Q8N8X9 362 aa10.93□□□□□ -0.66
PTCHD4-201ENST00000339488 ERVK-7P63135 1459 aa10.93□□□□□ -0.66
PTCHD4-201ENST00000339488 GOLGA6BA6NDN3 693 aa10.92□□□□□ -0.66
PTCHD4-201ENST00000339488 POTEB2H3BUK9 544 aa10.92□□□□□ -0.66
PTCHD4-201ENST00000339488 DNM1LO00429 736 aa10.92□□□□□ -0.66
PTCHD4-201ENST00000339488 PFKFB2O60825 505 aa10.92□□□□□ -0.66
PTCHD4-201ENST00000339488 PTH1RQ03431 593 aa10.92□□□□□ -0.66
PTCHD4-201ENST00000339488 CWF19L1Q69YN2 538 aaKnown RBP10.92□□□□□ -0.66
PTCHD4-201ENST00000339488 B4GALNT4Q76KP1 1039 aa10.92□□□□□ -0.66
PTCHD4-201ENST00000339488 SYCP3Q8IZU3 236 aa10.92□□□□□ -0.66
PTCHD4-201ENST00000339488 USHBP1Q8N6Y0 703 aa10.92□□□□□ -0.66
PTCHD4-201ENST00000339488 ZNF570Q96NI8 536 aa10.92□□□□□ -0.66
PTCHD4-201ENST00000339488 LSG1Q9H089 658 aaKnown RBP10.92□□□□□ -0.66
PTCHD4-201ENST00000339488 MMADHCQ9H3L0 296 aaPredicted RBP10.92□□□□□ -0.66
PTCHD4-201ENST00000339488 RBM47A0AV96 593 aaKnown RBP10.92□□□□□ -0.66
PTCHD4-201ENST00000339488 PAPOLAP51003 745 aaKnown RBP10.92□□□□□ -0.66
PTCHD4-201ENST00000339488 ATL3Q6DD88 541 aa10.92□□□□□ -0.66
PTCHD4-201ENST00000339488 SMARCC2Q8TAQ2 1214 aa10.92□□□□□ -0.66
PTCHD4-201ENST00000339488 COG1Q8WTW3 980 aa10.92□□□□□ -0.66
PTCHD4-201ENST00000339488 BRF1Q92994 677 aa10.92□□□□□ -0.66
PTCHD4-201ENST00000339488 SPAG5Q96R06 1193 aa10.92□□□□□ -0.66
PTCHD4-201ENST00000339488 MBIPQ9NS73 344 aa10.92□□□□□ -0.66
PTCHD4-201ENST00000339488 EIF2AK4Q9P2K8 1649 aaKnown RBP10.92□□□□□ -0.66
PTCHD4-201ENST00000339488 KIF3BO15066 747 aa10.91□□□□□ -0.66
PTCHD4-201ENST00000339488 MAFGO15525 162 aa10.91□□□□□ -0.66
PTCHD4-201ENST00000339488 ME1P48163 572 aa10.91□□□□□ -0.66
PTCHD4-201ENST00000339488 GUCY1B3Q02153 619 aa10.91□□□□□ -0.66
PTCHD4-201ENST00000339488 RRP12Q5JTH9 1297 aaKnown RBP10.91□□□□□ -0.66
PTCHD4-201ENST00000339488 SELENOOQ9BVL4 669 aa10.91□□□□□ -0.66
PTCHD4-201ENST00000339488 API5Q9BZZ5 524 aaKnown RBP10.91□□□□□ -0.66
PTCHD4-201ENST00000339488 HSD3B7Q9H2F3 369 aa10.91□□□□□ -0.66
PTCHD4-201ENST00000339488 PAPOLBQ9NRJ5 636 aaKnown RBP10.91□□□□□ -0.66
PTCHD4-201ENST00000339488 MAGEA8P43361 318 aa10.91□□□□□ -0.66
PTCHD4-201ENST00000339488 SPECC1Q5M775 1068 aa10.91□□□□□ -0.66
PTCHD4-201ENST00000339488 TRIM42Q8IWZ5 723 aa10.91□□□□□ -0.66
PTCHD4-201ENST00000339488 RPAP2Q8IXW5 612 aaPredicted RBP10.91□□□□□ -0.66
PTCHD4-201ENST00000339488 MSL3Q8N5Y2 521 aaKnown RBP10.91□□□□□ -0.66
PTCHD4-201ENST00000339488 ZNF473Q8WTR7 871 aaKnown RBP10.91□□□□□ -0.66
PTCHD4-201ENST00000339488 ARHGAP45Q92619 1136 aa10.91□□□□□ -0.66
PTCHD4-201ENST00000339488 CAPZA3Q96KX2 299 aa10.91□□□□□ -0.66
PTCHD4-201ENST00000339488 TRIM4Q9C037 500 aa10.91□□□□□ -0.66
PTCHD4-201ENST00000339488 OSBPL3Q9H4L5 887 aa10.91□□□□□ -0.66
PTCHD4-201ENST00000339488 INTS13Q9NVM9 706 aa10.91□□□□□ -0.66
PTCHD4-201ENST00000339488 TAF6LQ9Y6J9 622 aa10.91□□□□□ -0.66
PTCHD4-201ENST00000339488 RNF8O76064 485 aa10.91□□□□□ -0.66
PTCHD4-201ENST00000339488 CNGA1P29973 690 aa10.91□□□□□ -0.66
PTCHD4-201ENST00000339488 CFAP70Q5T0N1 1121 aa10.91□□□□□ -0.66
PTCHD4-201ENST00000339488 CPLX3Q8WVH0 158 aa10.91□□□□□ -0.66
PTCHD4-201ENST00000339488 HDAC6Q9UBN7 1215 aa10.91□□□□□ -0.66
PTCHD4-201ENST00000339488 MROH1Q8NDA8 1641 aa10.9□□□□□ -0.66
PTCHD4-201ENST00000339488 F6X3S4 739 aa10.9□□□□□ -0.66
PTCHD4-201ENST00000339488 EPB41L2O43491 1005 aaKnown RBP10.9□□□□□ -0.66
PTCHD4-201ENST00000339488 SRGAP2O75044 1071 aa10.9□□□□□ -0.66
PTCHD4-201ENST00000339488 FBLN1P23142 703 aa10.9□□□□□ -0.66
PTCHD4-201ENST00000339488 RESTQ13127 1097 aa10.9□□□□□ -0.66
PTCHD4-201ENST00000339488 TTMPQ5BVD1 217 aa10.9□□□□□ -0.66
PTCHD4-201ENST00000339488 ARHGAP22Q7Z5H3 698 aa10.9□□□□□ -0.66
PTCHD4-201ENST00000339488 FAM81AQ8TBF8 368 aa10.9□□□□□ -0.66
PTCHD4-201ENST00000339488 BICD1Q96G01 975 aa10.9□□□□□ -0.66
PTCHD4-201ENST00000339488 NOD2Q9HC29 1040 aa10.9□□□□□ -0.66
PTCHD4-201ENST00000339488 CYP46A1Q9Y6A2 500 aa10.9□□□□□ -0.66
PTCHD4-201ENST00000339488 UGGT1Q9NYU2 1555 aa10.9□□□□□ -0.66
PTCHD4-201ENST00000339488 MYOM2P54296 1465 aa10.9□□□□□ -0.66
PTCHD4-201ENST00000339488 H3BQV1 296 aa10.9□□□□□ -0.67
PTCHD4-201ENST00000339488 ENC1O14682 589 aa10.9□□□□□ -0.67
PTCHD4-201ENST00000339488 RAB11FIP3O75154 756 aa10.9□□□□□ -0.67
PTCHD4-201ENST00000339488 SMIM24O75264 130 aa10.9□□□□□ -0.67
PTCHD4-201ENST00000339488 HMOX1P09601 288 aa10.9□□□□□ -0.67
PTCHD4-201ENST00000339488 NEFHP12036 1026 aa10.9□□□□□ -0.67
PTCHD4-201ENST00000339488 DCTN1Q14203 1278 aa10.9□□□□□ -0.67
PTCHD4-201ENST00000339488 PPP1R15BQ5SWA1 713 aa10.9□□□□□ -0.67
PTCHD4-201ENST00000339488 IFFO2Q5TF58 517 aa10.9□□□□□ -0.67
PTCHD4-201ENST00000339488 RINLQ6ZS11 566 aa10.9□□□□□ -0.67
PTCHD4-201ENST00000339488 VSTM4Q8IW00 320 aa10.9□□□□□ -0.67
PTCHD4-201ENST00000339488 USP28Q96RU2 1077 aa10.9□□□□□ -0.67
PTCHD4-201ENST00000339488 TSC22D3Q99576 134 aa10.9□□□□□ -0.67
PTCHD4-201ENST00000339488 OCEL1Q9H607 264 aa10.9□□□□□ -0.67
PTCHD4-201ENST00000339488 RGL1Q9NZL6 768 aa10.9□□□□□ -0.67
PTCHD4-201ENST00000339488 IL16Q14005 1332 aa10.89□□□□□ -0.67
PTCHD4-201ENST00000339488 IQGAP1P46940 1657 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms