RNA–Protein interactions for RNA: ENST00000339363.7

RPGR-202, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 3,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-202ENST00000339363 CCDC114Q96M63 670 aa10.57□□□□□ -0.72
RPGR-202ENST00000339363 PALLDQ8WX93 1383 aa10.56□□□□□ -0.72
RPGR-202ENST00000339363 A0A1B0GVL5 298 aa10.56□□□□□ -0.72
RPGR-202ENST00000339363 PPARDQ03181 441 aa10.56□□□□□ -0.72
RPGR-202ENST00000339363 DPCR1Q3MIW9 517 aa10.56□□□□□ -0.72
RPGR-202ENST00000339363 MICALCLQ6ZW33 695 aa10.56□□□□□ -0.72
RPGR-202ENST00000339363 ZNF396Q96N95 335 aaPredicted RBP10.56□□□□□ -0.72
RPGR-202ENST00000339363 PAIP2Q9BPZ3 127 aaKnown RBP10.56□□□□□ -0.72
RPGR-202ENST00000339363 DBNDD2Q9BQY9 259 aa10.56□□□□□ -0.72
RPGR-202ENST00000339363 OSBPL5Q9H0X9 879 aaPredicted RBP10.56□□□□□ -0.72
RPGR-202ENST00000339363 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.56□□□□□ -0.722e-6■■■■■ 55.4
RPGR-202ENST00000339363 KIF3CO14782 793 aa10.56□□□□□ -0.72
RPGR-202ENST00000339363 IRX1P78414 480 aaPredicted RBP10.56□□□□□ -0.72
RPGR-202ENST00000339363 ZNF530Q6P9A1 599 aaPredicted RBP10.56□□□□□ -0.72
RPGR-202ENST00000339363 SRGAP1Q7Z6B7 1085 aa10.56□□□□□ -0.72
RPGR-202ENST00000339363 FBXO41Q8TF61 875 aa10.56□□□□□ -0.72
RPGR-202ENST00000339363 PIK3R5Q8WYR1 880 aa10.56□□□□□ -0.72
RPGR-202ENST00000339363 ATP5J2-PTCD1G3V325 749 aa10.56□□□□□ -0.72
RPGR-202ENST00000339363 ARHGAP6O43182 974 aa10.56□□□□□ -0.72
RPGR-202ENST00000339363 PTCD1O75127 700 aaKnown RBP10.56□□□□□ -0.72
RPGR-202ENST00000339363 CCDC70Q6NSX1 233 aa10.56□□□□□ -0.72
RPGR-202ENST00000339363 MYO6Q9UM54 1294 aa10.56□□□□□ -0.72
RPGR-202ENST00000339363 UBR1Q8IWV7 1749 aa10.55□□□□□ -0.72
RPGR-202ENST00000339363 GOLGA6L7A0A1B0GV03 622 aa10.55□□□□□ -0.72
RPGR-202ENST00000339363 GRM8O00222 908 aa10.55□□□□□ -0.72
RPGR-202ENST00000339363 ERCC3P19447 782 aa10.55□□□□□ -0.72
RPGR-202ENST00000339363 TEFQ10587 303 aa10.55□□□□□ -0.72
RPGR-202ENST00000339363 RBBP5Q15291 538 aaKnown RBP10.55□□□□□ -0.72
RPGR-202ENST00000339363 ZKSCAN8Q15776 578 aaPredicted RBP10.55□□□□□ -0.72
RPGR-202ENST00000339363 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.55□□□□□ -0.72
RPGR-202ENST00000339363 TNRQ92752 1358 aa10.55□□□□□ -0.72
RPGR-202ENST00000339363 ATP1A3P13637 1013 aa10.55□□□□□ -0.72
RPGR-202ENST00000339363 FDPSP14324 419 aaKnown RBP10.55□□□□□ -0.72
RPGR-202ENST00000339363 KIAA1328Q86T90 577 aa10.55□□□□□ -0.72
RPGR-202ENST00000339363 NSUN7Q8NE18 718 aaKnown RBP10.55□□□□□ -0.72
RPGR-202ENST00000339363 ENGASEQ8NFI3 743 aa10.55□□□□□ -0.72
RPGR-202ENST00000339363 ATRIPQ8WXE1 791 aa10.55□□□□□ -0.72
RPGR-202ENST00000339363 RIN2Q8WYP3 895 aaPredicted RBP10.55□□□□□ -0.72
RPGR-202ENST00000339363 RSRC1Q96IZ7 334 aaKnown RBP10.55□□□□□ -0.72
RPGR-202ENST00000339363 KIF4AO95239 1232 aa10.55□□□□□ -0.72
RPGR-202ENST00000339363 GCFC2P16383 781 aaKnown RBP10.55□□□□□ -0.72
RPGR-202ENST00000339363 STIM1Q13586 685 aa10.55□□□□□ -0.72
RPGR-202ENST00000339363 ARMC2Q8NEN0 867 aa10.55□□□□□ -0.72
RPGR-202ENST00000339363 HINFPQ9BQA5 517 aa10.55□□□□□ -0.72
RPGR-202ENST00000339363 NUCKS1Q9H1E3 243 aaKnown RBP10.55□□□□□ -0.72
RPGR-202ENST00000339363 DIP2AQ14689 1571 aa10.55□□□□□ -0.72
RPGR-202ENST00000339363 CCDC189A1A4V9 331 aa10.54□□□□□ -0.72
RPGR-202ENST00000339363 ADKP55263 362 aaKnown RBP10.54□□□□□ -0.72
RPGR-202ENST00000339363 PSME1Q06323 249 aa10.54□□□□□ -0.72
RPGR-202ENST00000339363 ANKRD1Q15327 319 aa10.54□□□□□ -0.72
RPGR-202ENST00000339363 B4GALNT4Q76KP1 1039 aa10.54□□□□□ -0.72
RPGR-202ENST00000339363 IGSF22Q8N9C0 903 aa10.54□□□□□ -0.72
RPGR-202ENST00000339363 CAPS2Q9BXY5 557 aa10.54□□□□□ -0.72
RPGR-202ENST00000339363 HSD3B7Q9H2F3 369 aa10.54□□□□□ -0.72
RPGR-202ENST00000339363 MRFAP1Q9Y605 127 aa10.54□□□□□ -0.72
RPGR-202ENST00000339363 CTAGE9A4FU28 777 aa10.54□□□□□ -0.72
RPGR-202ENST00000339363 CAND2O75155 1236 aa10.54□□□□□ -0.72
RPGR-202ENST00000339363 CCDC175P0C221 793 aa10.54□□□□□ -0.72
RPGR-202ENST00000339363 NDUFA8P51970 172 aa10.54□□□□□ -0.72
RPGR-202ENST00000339363 PSMD2Q13200 908 aa10.54□□□□□ -0.72
RPGR-202ENST00000339363 KSR2Q6VAB6 950 aa10.54□□□□□ -0.72
RPGR-202ENST00000339363 JMYQ8N9B5 988 aa10.54□□□□□ -0.72
RPGR-202ENST00000339363 MICAL1Q8TDZ2 1067 aa10.54□□□□□ -0.72
RPGR-202ENST00000339363 DPF2Q92785 391 aa10.54□□□□□ -0.72
RPGR-202ENST00000339363 IRX2Q9BZI1 471 aaPredicted RBP10.54□□□□□ -0.72
RPGR-202ENST00000339363 CLIC4Q9Y696 253 aa10.54□□□□□ -0.72
RPGR-202ENST00000339363 MED1Q15648 1581 aaPredicted RBP10.54□□□□□ -0.72
RPGR-202ENST00000339363 ENO4A6NNW6 628 aa10.54□□□□□ -0.72
RPGR-202ENST00000339363 POLR3DP05423 398 aaPredicted RBP10.54□□□□□ -0.72
RPGR-202ENST00000339363 FAM160A1Q05DH4 1040 aa10.54□□□□□ -0.72
RPGR-202ENST00000339363 BEND6Q5SZJ8 279 aaPredicted RBP10.54□□□□□ -0.72
RPGR-202ENST00000339363 PPFIBP1Q86W92 1011 aa10.54□□□□□ -0.72
RPGR-202ENST00000339363 AIFM3Q96NN9 605 aa10.54□□□□□ -0.72
RPGR-202ENST00000339363 FOXP2O15409 715 aa10.53□□□□□ -0.72
RPGR-202ENST00000339363 EPB41L2O43491 1005 aaKnown RBP10.53□□□□□ -0.72
RPGR-202ENST00000339363 PPP1R12BO60237 982 aaPredicted RBP10.53□□□□□ -0.72
RPGR-202ENST00000339363 TIMM10P62072 90 aa10.53□□□□□ -0.72
RPGR-202ENST00000339363 VSNL1P62760 191 aa10.53□□□□□ -0.72
RPGR-202ENST00000339363 MAP3K9P80192 1104 aa10.53□□□□□ -0.72
RPGR-202ENST00000339363 NUP133Q8WUM0 1156 aa10.53□□□□□ -0.72
RPGR-202ENST00000339363 SNRKQ9NRH2 765 aa10.53□□□□□ -0.72
RPGR-202ENST00000339363 HOOK1Q9UJC3 728 aaKnown RBP10.53□□□□□ -0.72
RPGR-202ENST00000339363 A0A0U1RQJ8 604 aa10.53□□□□□ -0.72
RPGR-202ENST00000339363 CPP00450 1065 aa10.53□□□□□ -0.72
RPGR-202ENST00000339363 TFRCP02786 760 aaKnown RBP10.53□□□□□ -0.72
RPGR-202ENST00000339363 RFX5P48382 616 aaPredicted RBP10.53□□□□□ -0.72
RPGR-202ENST00000339363 PTPN12Q05209 780 aaKnown RBP10.53□□□□□ -0.72
RPGR-202ENST00000339363 FKBP15Q5T1M5 1219 aa10.53□□□□□ -0.72
RPGR-202ENST00000339363 SPDL1Q96EA4 605 aa10.53□□□□□ -0.72
RPGR-202ENST00000339363 CLIC6Q96NY7 704 aa10.53□□□□□ -0.72
RPGR-202ENST00000339363 NEK1Q96PY6 1258 aa10.53□□□□□ -0.72
RPGR-202ENST00000339363 SH3BP1Q9Y3L3 701 aa10.53□□□□□ -0.72
RPGR-202ENST00000339363 KDM3BQ7LBC6 1761 aa10.53□□□□□ -0.72
RPGR-202ENST00000339363 RNMTO43148 476 aaKnown RBP10.53□□□□□ -0.72
RPGR-202ENST00000339363 ARHGAP25P42331 645 aa10.53□□□□□ -0.72
RPGR-202ENST00000339363 CCDC181Q5TID7 509 aa10.53□□□□□ -0.72
RPGR-202ENST00000339363 SYNE3Q6ZMZ3 975 aa10.53□□□□□ -0.72
RPGR-202ENST00000339363 MRPS27Q92552 414 aaKnown RBP10.53□□□□□ -0.72
RPGR-202ENST00000339363 DBF4Q9UBU7 674 aaPredicted RBP10.53□□□□□ -0.72
RPGR-202ENST00000339363 PCDHA7Q9UN72 937 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms