RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 MICALL2Q8IY33 904 aa17.26■□□□□ 0.35
NIPAL3-202ENST00000339255 IDI2Q9BXS1 227 aa17.26■□□□□ 0.35
NIPAL3-202ENST00000339255 COL2A1P02458 1487 aaPredicted RBP17.26■□□□□ 0.35
NIPAL3-202ENST00000339255 MYH8P13535 1937 aa17.26■□□□□ 0.35
NIPAL3-202ENST00000339255 H7C1D1 291 aa17.26■□□□□ 0.35
NIPAL3-202ENST00000339255 SLC3A2P08195 630 aaKnown RBP17.26■□□□□ 0.35
NIPAL3-202ENST00000339255 HMGB1P09429 215 aaKnown RBP17.26■□□□□ 0.35
NIPAL3-202ENST00000339255 FKBP1CQ5VVH2 108 aa17.26■□□□□ 0.35
NIPAL3-202ENST00000339255 ZBED3Q96IU2 234 aaPredicted RBP17.26■□□□□ 0.35
NIPAL3-202ENST00000339255 RNF41Q9H4P4 317 aaPredicted RBP17.26■□□□□ 0.35
NIPAL3-202ENST00000339255 MCM9Q9NXL9 1143 aa17.26■□□□□ 0.35
NIPAL3-202ENST00000339255 GPRC5DQ9NZD1 345 aa17.26■□□□□ 0.35
NIPAL3-202ENST00000339255 CNOT7Q9UIV1 285 aaKnown RBP17.26■□□□□ 0.35
NIPAL3-202ENST00000339255 SCN4AP35499 1836 aa17.25■□□□□ 0.35
NIPAL3-202ENST00000339255 ROBO3Q96MS0 1386 aa17.25■□□□□ 0.35
NIPAL3-202ENST00000339255 USP17L12C9JPN9 530 aa17.25■□□□□ 0.35
NIPAL3-202ENST00000339255 USP17L21D6R901 530 aa17.25■□□□□ 0.35
NIPAL3-202ENST00000339255 PPARAQ07869 468 aa17.25■□□□□ 0.35
NIPAL3-202ENST00000339255 CTR9Q6PD62 1173 aa17.25■□□□□ 0.35
NIPAL3-202ENST00000339255 PRMT6Q96LA8 375 aaPredicted RBP17.25■□□□□ 0.35
NIPAL3-202ENST00000339255 JAKMIP1Q96N16 626 aaKnown RBP17.25■□□□□ 0.35
NIPAL3-202ENST00000339255 CNNM2Q9H8M5 875 aa17.25■□□□□ 0.35
NIPAL3-202ENST00000339255 NT5C2P49902 561 aa17.24■□□□□ 0.35
NIPAL3-202ENST00000339255 HAND2P61296 217 aa17.24■□□□□ 0.35
NIPAL3-202ENST00000339255 TRDNQ13061 729 aa17.24■□□□□ 0.35
NIPAL3-202ENST00000339255 MAPKAPK5Q8IW41 473 aa17.24■□□□□ 0.35
NIPAL3-202ENST00000339255 TAOK2Q9UL54 1235 aa17.24■□□□□ 0.35
NIPAL3-202ENST00000339255 E7EWF7 191 aa17.23■□□□□ 0.35
NIPAL3-202ENST00000339255 ST18O60284 1047 aa17.23■□□□□ 0.35
NIPAL3-202ENST00000339255 LMOD1P29536 600 aaPredicted RBP17.23■□□□□ 0.35
NIPAL3-202ENST00000339255 SPDYE2Q495Y8 402 aa17.23■□□□□ 0.35
NIPAL3-202ENST00000339255 AKNAD1Q5T1N1 836 aa17.23■□□□□ 0.35
NIPAL3-202ENST00000339255 C12orf60Q5U649 245 aa17.23■□□□□ 0.35
NIPAL3-202ENST00000339255 DHX36Q9H2U1 1008 aaKnown RBP17.23■□□□□ 0.35
NIPAL3-202ENST00000339255 TDRD3Q9H7E2 651 aaKnown RBP17.23■□□□□ 0.35
NIPAL3-202ENST00000339255 ZSWIM6Q9HCJ5 1215 aa17.23■□□□□ 0.35
NIPAL3-202ENST00000339255 CYP46A1Q9Y6A2 500 aa17.23■□□□□ 0.35
NIPAL3-202ENST00000339255 ENTPD3O75355 529 aa17.23■□□□□ 0.35
NIPAL3-202ENST00000339255 CASTP20810 708 aaKnown RBP17.23■□□□□ 0.35
NIPAL3-202ENST00000339255 BLOC1S2Q6QNY1 142 aa17.23■□□□□ 0.35
NIPAL3-202ENST00000339255 RALYLQ86SE5 291 aaKnown RBP17.23■□□□□ 0.35
NIPAL3-202ENST00000339255 STAG1Q8WVM7 1258 aa17.23■□□□□ 0.35
NIPAL3-202ENST00000339255 L3MBTL3Q96JM7 780 aaPredicted RBP17.23■□□□□ 0.35
NIPAL3-202ENST00000339255 NEK1Q96PY6 1258 aa17.23■□□□□ 0.35
NIPAL3-202ENST00000339255 NBPF3Q9H094 633 aa17.23■□□□□ 0.35
NIPAL3-202ENST00000339255 OSBPL5Q9H0X9 879 aaPredicted RBP17.23■□□□□ 0.35
NIPAL3-202ENST00000339255 PCDHAC2Q9Y5I4 1007 aa17.23■□□□□ 0.35
NIPAL3-202ENST00000339255 MINDY4BA8MYZ0 360 aa17.22■□□□□ 0.35
NIPAL3-202ENST00000339255 WNT10BO00744 389 aa17.22■□□□□ 0.35
NIPAL3-202ENST00000339255 POLR3DP05423 398 aaPredicted RBP17.22■□□□□ 0.35
NIPAL3-202ENST00000339255 PICALMQ13492 652 aa17.22■□□□□ 0.35
NIPAL3-202ENST00000339255 KIF4BQ2VIQ3 1234 aa17.22■□□□□ 0.35
NIPAL3-202ENST00000339255 ADCK5Q3MIX3 580 aa17.22■□□□□ 0.35
NIPAL3-202ENST00000339255 MFSD6Q6ZSS7 791 aa17.22■□□□□ 0.35
NIPAL3-202ENST00000339255 RUFY3Q7L099 469 aa17.22■□□□□ 0.35
NIPAL3-202ENST00000339255 TTC6Q86TZ1 520 aa17.22■□□□□ 0.35
NIPAL3-202ENST00000339255 TBC1D10CQ8IV04 446 aa17.22■□□□□ 0.35
NIPAL3-202ENST00000339255 NCOA7Q8NI08 942 aa17.22■□□□□ 0.35
NIPAL3-202ENST00000339255 ZNF287Q9HBT7 754 aa17.22■□□□□ 0.35
NIPAL3-202ENST00000339255 ZNF70Q9UC06 446 aaPredicted RBP17.22■□□□□ 0.35
NIPAL3-202ENST00000339255 TAF6LQ9Y6J9 622 aa17.22■□□□□ 0.35
NIPAL3-202ENST00000339255 NEK4P51957 841 aa17.21■□□□□ 0.35
NIPAL3-202ENST00000339255 UPF3BQ9BZI7 483 aaKnown RBP17.21■□□□□ 0.35
NIPAL3-202ENST00000339255 KRT23Q9C075 422 aa17.21■□□□□ 0.35
NIPAL3-202ENST00000339255 DDX4Q9NQI0 724 aaKnown RBP17.21■□□□□ 0.35
NIPAL3-202ENST00000339255 ATRNL1Q5VV63 1379 aa17.21■□□□□ 0.35
NIPAL3-202ENST00000339255 WDR19Q8NEZ3 1342 aa17.21■□□□□ 0.34
NIPAL3-202ENST00000339255 GLTPD2A6NH11 291 aa17.2■□□□□ 0.34
NIPAL3-202ENST00000339255 DDNO94850 711 aaPredicted RBP17.2■□□□□ 0.34
NIPAL3-202ENST00000339255 PDE4BQ07343 736 aa17.2■□□□□ 0.34
NIPAL3-202ENST00000339255 NFIAQ12857 509 aa17.2■□□□□ 0.34
NIPAL3-202ENST00000339255 TNFAIP1Q13829 316 aa17.2■□□□□ 0.34
NIPAL3-202ENST00000339255 STOX1Q6ZVD7 989 aa17.2■□□□□ 0.34
NIPAL3-202ENST00000339255 FAM83AQ86UY5 434 aa17.2■□□□□ 0.34
NIPAL3-202ENST00000339255 WDR90Q96KV7 1748 aa17.2■□□□□ 0.34
NIPAL3-202ENST00000339255 SHTN1A0MZ66 631 aa17.2■□□□□ 0.34
NIPAL3-202ENST00000339255 HLA-DOAP06340 250 aa17.2■□□□□ 0.34
NIPAL3-202ENST00000339255 FGRP09769 529 aa17.2■□□□□ 0.34
NIPAL3-202ENST00000339255 CTDSPL2Q05D32 466 aa17.2■□□□□ 0.34
NIPAL3-202ENST00000339255 FAM198AQ9UFP1 575 aa17.2■□□□□ 0.34
NIPAL3-202ENST00000339255 SAP30BPQ9UHR5 308 aaKnown RBP17.2■□□□□ 0.34
NIPAL3-202ENST00000339255 CYP2D7A0A087X1C5 515 aa17.19■□□□□ 0.34
NIPAL3-202ENST00000339255 ORC4O43929 436 aa17.19■□□□□ 0.34
NIPAL3-202ENST00000339255 RPS6KB1P23443 525 aa17.19■□□□□ 0.34
NIPAL3-202ENST00000339255 MCM5P33992 734 aa17.19■□□□□ 0.34
NIPAL3-202ENST00000339255 TNNI2P48788 182 aa17.19■□□□□ 0.34
NIPAL3-202ENST00000339255 MCM2P49736 904 aa17.19■□□□□ 0.34
NIPAL3-202ENST00000339255 BECN1Q14457 450 aa17.19■□□□□ 0.34
NIPAL3-202ENST00000339255 NBPF9Q3BBW0 867 aa17.19■□□□□ 0.34
NIPAL3-202ENST00000339255 TBC1D10BQ4KMP7 808 aaPredicted RBP17.19■□□□□ 0.34
NIPAL3-202ENST00000339255 DHX32Q7L7V1 743 aaKnown RBP17.19■□□□□ 0.34
NIPAL3-202ENST00000339255 SAMD7Q7Z3H4 446 aa17.19■□□□□ 0.34
NIPAL3-202ENST00000339255 SNX21Q969T3 373 aa17.19■□□□□ 0.34
NIPAL3-202ENST00000339255 EHD4Q9H223 541 aa17.19■□□□□ 0.34
NIPAL3-202ENST00000339255 ADARB2Q9NS39 739 aaKnown RBP17.19■□□□□ 0.34
NIPAL3-202ENST00000339255 SIPA1L1O43166 1804 aa17.19■□□□□ 0.34
NIPAL3-202ENST00000339255 CLRN2A0PK11 232 aa17.18■□□□□ 0.34
NIPAL3-202ENST00000339255 CACNB3P54284 484 aa17.18■□□□□ 0.34
NIPAL3-202ENST00000339255 NEDD4P46934 1319 aa17.18■□□□□ 0.34
NIPAL3-202ENST00000339255 IQCA1LA6NCM1 817 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms