RNA–Protein interactions for RNA: ENST00000338888.3

RUNX3-202, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RUNX3, Length 2,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-202ENST00000338888 FBXL16Q8N461 479 aa23.28■■□□□ 1.32
RUNX3-202ENST00000338888 EIF3CQ99613 913 aaKnown RBP23.28■■□□□ 1.32
RUNX3-202ENST00000338888 KCNH3Q9ULD8 1083 aa23.28■■□□□ 1.32
RUNX3-202ENST00000338888 AKAP2Q9Y2D5 859 aa23.28■■□□□ 1.32
RUNX3-202ENST00000338888 RNF113AO15541 343 aaKnown RBP23.28■■□□□ 1.32
RUNX3-202ENST00000338888 PIP4K2AP48426 406 aaPredicted RBP23.28■■□□□ 1.32
RUNX3-202ENST00000338888 SLC39A6Q13433 755 aa23.28■■□□□ 1.32
RUNX3-202ENST00000338888 TTC31Q49AM3 519 aaPredicted RBP23.28■■□□□ 1.32
RUNX3-202ENST00000338888 MSANTD4Q8NCY6 345 aa23.28■■□□□ 1.32
RUNX3-202ENST00000338888 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.28■■□□□ 1.32
RUNX3-202ENST00000338888 MST1RQ04912 1400 aa23.27■■□□□ 1.32
RUNX3-202ENST00000338888 ZNF827Q17R98 1081 aa23.27■■□□□ 1.32
RUNX3-202ENST00000338888 KIF4BQ2VIQ3 1234 aa23.27■■□□□ 1.32
RUNX3-202ENST00000338888 ZNF569Q5MCW4 686 aa23.27■■□□□ 1.32
RUNX3-202ENST00000338888 ANKRD24Q8TF21 1146 aa23.27■■□□□ 1.32
RUNX3-202ENST00000338888 RAI14Q9P0K7 980 aa23.27■■□□□ 1.32
RUNX3-202ENST00000338888 PXDNQ92626 1479 aa23.27■■□□□ 1.32
RUNX3-202ENST00000338888 KIF5CO60282 957 aa23.27■■□□□ 1.32
RUNX3-202ENST00000338888 VSNL1P62760 191 aa23.27■■□□□ 1.32
RUNX3-202ENST00000338888 RAD9BQ6WBX8 426 aa23.27■■□□□ 1.32
RUNX3-202ENST00000338888 CPLX3Q8WVH0 158 aa23.27■■□□□ 1.32
RUNX3-202ENST00000338888 SAMSN1Q9NSI8 373 aaKnown RBP23.27■■□□□ 1.32
RUNX3-202ENST00000338888 AXIN2Q9Y2T1 843 aa23.27■■□□□ 1.32
RUNX3-202ENST00000338888 ADGRG1Q9Y653 693 aa23.27■■□□□ 1.32
RUNX3-202ENST00000338888 POTEB2H3BUK9 544 aa23.26■■□□□ 1.31
RUNX3-202ENST00000338888 RPS6KA5O75582 802 aa23.26■■□□□ 1.31
RUNX3-202ENST00000338888 ZNF18P17022 549 aa23.26■■□□□ 1.31
RUNX3-202ENST00000338888 CASP8Q14790 479 aa23.26■■□□□ 1.31
RUNX3-202ENST00000338888 CADPS2Q86UW7 1296 aa23.26■■□□□ 1.31
RUNX3-202ENST00000338888 OSBP2Q969R2 916 aa23.26■■□□□ 1.31
RUNX3-202ENST00000338888 ALG1Q9BT22 464 aa23.26■■□□□ 1.31
RUNX3-202ENST00000338888 PLEKHA4Q9H4M7 779 aa23.26■■□□□ 1.31
RUNX3-202ENST00000338888 ATP5J2-PTCD1G3V325 749 aa23.26■■□□□ 1.31
RUNX3-202ENST00000338888 PTCD1O75127 700 aaKnown RBP23.26■■□□□ 1.31
RUNX3-202ENST00000338888 AMOTQ4VCS5 1084 aa23.26■■□□□ 1.31
RUNX3-202ENST00000338888 CABLES1Q8TDN4 633 aa23.26■■□□□ 1.31
RUNX3-202ENST00000338888 MAN1B1Q9UKM7 699 aa23.26■■□□□ 1.31
RUNX3-202ENST00000338888 AKR1B15C9JRZ8 316 aaPredicted RBP23.25■■□□□ 1.31
RUNX3-202ENST00000338888 RABL6Q3YEC7 729 aaPredicted RBP23.25■■□□□ 1.31
RUNX3-202ENST00000338888 HSP90B2PQ58FF3 399 aa23.25■■□□□ 1.31
RUNX3-202ENST00000338888 LRRC31Q6UY01 552 aa23.25■■□□□ 1.31
RUNX3-202ENST00000338888 TEX13AQ9BXU3 409 aaPredicted RBP23.25■■□□□ 1.31
RUNX3-202ENST00000338888 FAM237AA0A1B0GTK4 181 aa23.25■■□□□ 1.31
RUNX3-202ENST00000338888 ANTXR2P58335 489 aa23.25■■□□□ 1.31
RUNX3-202ENST00000338888 ANKRD13DQ6ZTN6 518 aa23.25■■□□□ 1.31
RUNX3-202ENST00000338888 MAP3K14Q99558 947 aa23.25■■□□□ 1.31
RUNX3-202ENST00000338888 JRKLQ9Y4A0 524 aa23.25■■□□□ 1.31
RUNX3-202ENST00000338888 IMMTQ16891 758 aaKnown RBP23.24■■□□□ 1.31
RUNX3-202ENST00000338888 KRT40Q6A162 431 aa23.24■■□□□ 1.31
RUNX3-202ENST00000338888 LMBR1LQ6UX01 489 aa23.24■■□□□ 1.31
RUNX3-202ENST00000338888 A0A087WZG4 1122 aa23.24■■□□□ 1.31
RUNX3-202ENST00000338888 IFIT1P09914 478 aaKnown RBP23.24■■□□□ 1.31
RUNX3-202ENST00000338888 MB21D2Q8IYB1 491 aaPredicted RBP23.24■■□□□ 1.31
RUNX3-202ENST00000338888 RXRAP19793 462 aa23.23■■□□□ 1.31
RUNX3-202ENST00000338888 MDM2Q00987 491 aaPredicted RBP23.23■■□□□ 1.31
RUNX3-202ENST00000338888 NR1I3Q14994 352 aa23.23■■□□□ 1.31
RUNX3-202ENST00000338888 TEX33O43247 280 aa23.23■■□□□ 1.31
RUNX3-202ENST00000338888 MED15Q96RN5 788 aa23.23■■□□□ 1.31
RUNX3-202ENST00000338888 MKRN1Q9UHC7 482 aaKnown RBP23.23■■□□□ 1.31
RUNX3-202ENST00000338888 FGAP02671 866 aa23.22■■□□□ 1.31
RUNX3-202ENST00000338888 PRR29P0C7W0 189 aa23.22■■□□□ 1.31
RUNX3-202ENST00000338888 MSL3Q8N5Y2 521 aaKnown RBP23.22■■□□□ 1.31
RUNX3-202ENST00000338888 FAM71BQ8TC56 605 aa23.22■■□□□ 1.31
RUNX3-202ENST00000338888 ENOX1Q8TC92 643 aaKnown RBP23.22■■□□□ 1.31
RUNX3-202ENST00000338888 LMO7Q8WWI1 1683 aa23.22■■□□□ 1.31
RUNX3-202ENST00000338888 RBL2Q08999 1139 aa23.22■■□□□ 1.31
RUNX3-202ENST00000338888 WASHC4Q2M389 1173 aa23.22■■□□□ 1.31
RUNX3-202ENST00000338888 FAM204AQ9H8W3 233 aa23.22■■□□□ 1.31
RUNX3-202ENST00000338888 TOMM22Q9NS69 142 aa23.22■■□□□ 1.31
RUNX3-202ENST00000338888 LRRIQ3A6PVS8 624 aaPredicted RBP23.21■■□□□ 1.31
RUNX3-202ENST00000338888 FOXP2O15409 715 aa23.21■■□□□ 1.31
RUNX3-202ENST00000338888 RALYLQ86SE5 291 aaKnown RBP23.21■■□□□ 1.31
RUNX3-202ENST00000338888 NUTM2AQ8IVF1 878 aaPredicted RBP23.21■■□□□ 1.31
RUNX3-202ENST00000338888 SLC35F6Q8N357 371 aa23.21■■□□□ 1.31
RUNX3-202ENST00000338888 RGS22Q8NE09 1264 aa23.21■■□□□ 1.31
RUNX3-202ENST00000338888 PHKBQ93100 1093 aa23.21■■□□□ 1.31
RUNX3-202ENST00000338888 PANX2Q96RD6 677 aa23.21■■□□□ 1.31
RUNX3-202ENST00000338888 YY1AP1Q9H869 796 aa23.21■■□□□ 1.31
RUNX3-202ENST00000338888 ZNF335Q9H4Z2 1342 aaPredicted RBP23.21■■□□□ 1.31
RUNX3-202ENST00000338888 CTAGE9A4FU28 777 aa23.21■■□□□ 1.31
RUNX3-202ENST00000338888 CORO7P57737 925 aa23.21■■□□□ 1.31
RUNX3-202ENST00000338888 FKBP4Q02790 459 aaKnown RBP eCLIP23.21■■□□□ 1.31
RUNX3-202ENST00000338888 POSTNQ15063 836 aa23.21■■□□□ 1.31
RUNX3-202ENST00000338888 SKIDA1Q1XH10 827 aa23.21■■□□□ 1.31
RUNX3-202ENST00000338888 HSP90AB3PQ58FF7 597 aa23.21■■□□□ 1.31
RUNX3-202ENST00000338888 TAF7LQ5H9L4 462 aa23.21■■□□□ 1.31
RUNX3-202ENST00000338888 TTC39AQ5SRH9 613 aa23.21■■□□□ 1.31
RUNX3-202ENST00000338888 GRAMD1CQ8IYS0 662 aa23.21■■□□□ 1.31
RUNX3-202ENST00000338888 NCOA7Q8NI08 942 aa23.21■■□□□ 1.31
RUNX3-202ENST00000338888 CDC5LQ99459 802 aaKnown RBP23.21■■□□□ 1.31
RUNX3-202ENST00000338888 ATG9AQ7Z3C6 839 aa23.2■■□□□ 1.3
RUNX3-202ENST00000338888 LMTK3Q96Q04 1460 aa23.2■■□□□ 1.3
RUNX3-202ENST00000338888 ABL1P00519 1130 aa23.2■■□□□ 1.3
RUNX3-202ENST00000338888 PPFIBP1Q86W92 1011 aa23.2■■□□□ 1.3
RUNX3-202ENST00000338888 MLKLQ8NB16 471 aa23.2■■□□□ 1.3
RUNX3-202ENST00000338888 DRC1Q96MC2 740 aa23.2■■□□□ 1.3
RUNX3-202ENST00000338888 TRPM3Q9HCF6 1732 aaPredicted RBP23.2■■□□□ 1.3
RUNX3-202ENST00000338888 CTAGE15A4D2H0 777 aa23.19■■□□□ 1.3
RUNX3-202ENST00000338888 CTAGE8P0CG41 777 aa23.19■■□□□ 1.3
RUNX3-202ENST00000338888 SLC9C2Q5TAH2 1124 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms