RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best) BASIC

Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 MINDY4BA8MYZ0 360 aa19.04■□□□□ 0.64
HPS1-202ENST00000338546 IFIT3O14879 490 aaKnown RBP19.04■□□□□ 0.64
HPS1-202ENST00000338546 CTR9Q6PD62 1173 aa19.04■□□□□ 0.64
HPS1-202ENST00000338546 CDC37L1Q7L3B6 337 aa19.04■□□□□ 0.64
HPS1-202ENST00000338546 ZC3H12CQ9C0D7 883 aaKnown RBP19.04■□□□□ 0.64
HPS1-202ENST00000338546 MROH7-TTC4A0A0A0MT08 1334 aa19.04■□□□□ 0.64
HPS1-202ENST00000338546 CPLX1O14810 134 aa19.03■□□□□ 0.64
HPS1-202ENST00000338546 ZBTB43O43298 467 aa19.03■□□□□ 0.64
HPS1-202ENST00000338546 ORC4O43929 436 aa19.03■□□□□ 0.64
HPS1-202ENST00000338546 PLCG2P16885 1265 aa19.03■□□□□ 0.64
HPS1-202ENST00000338546 METAP2P50579 478 aaKnown RBP eCLIP19.03■□□□□ 0.642e-7■■■□□ 14.6
HPS1-202ENST00000338546 KRT85P78386 507 aa19.03■□□□□ 0.64
HPS1-202ENST00000338546 PPP2R5BQ15173 497 aa19.03■□□□□ 0.64
HPS1-202ENST00000338546 L1TD1Q5T7N2 865 aaKnown RBP19.03■□□□□ 0.64
HPS1-202ENST00000338546 APOA5Q6Q788 366 aa19.03■□□□□ 0.64
HPS1-202ENST00000338546 DPP8Q6V1X1 898 aaPredicted RBP19.03■□□□□ 0.64
HPS1-202ENST00000338546 SYNE3Q6ZMZ3 975 aa19.03■□□□□ 0.64
HPS1-202ENST00000338546 USP48Q86UV5 1035 aa19.03■□□□□ 0.64
HPS1-202ENST00000338546 C2CD5Q86YS7 1000 aa19.03■□□□□ 0.64
HPS1-202ENST00000338546 CNKSR1Q969H4 720 aa19.03■□□□□ 0.64
HPS1-202ENST00000338546 NCOA5Q9HCD5 579 aaKnown RBP19.03■□□□□ 0.64
HPS1-202ENST00000338546 TACC3Q9Y6A5 838 aa19.03■□□□□ 0.64
HPS1-202ENST00000338546 MSL1Q68DK7 614 aa19.02■□□□□ 0.64
HPS1-202ENST00000338546 ATL3Q6DD88 541 aa19.02■□□□□ 0.64
HPS1-202ENST00000338546 SLC51AQ86UW1 340 aa19.02■□□□□ 0.64
HPS1-202ENST00000338546 KLHL34Q8N239 644 aa19.02■□□□□ 0.64
HPS1-202ENST00000338546 DDX11Q96FC9 970 aa19.02■□□□□ 0.64
HPS1-202ENST00000338546 GPR101Q96P66 508 aaPredicted RBP19.02■□□□□ 0.64
HPS1-202ENST00000338546 SLC12A7Q9Y666 1083 aa19.02■□□□□ 0.64
HPS1-202ENST00000338546 TCHHQ07283 1943 aa19.02■□□□□ 0.64
HPS1-202ENST00000338546 GPR75-ASB3A0A0A6YYF3 556 aa19.02■□□□□ 0.63
HPS1-202ENST00000338546 FSD2A1L4K1 749 aa19.02■□□□□ 0.63
HPS1-202ENST00000338546 CCDC69A6NI79 296 aa19.02■□□□□ 0.63
HPS1-202ENST00000338546 USP17L12C9JPN9 530 aa19.02■□□□□ 0.63
HPS1-202ENST00000338546 USP17L21D6R901 530 aa19.02■□□□□ 0.63
HPS1-202ENST00000338546 UBE2HP62256 183 aa19.02■□□□□ 0.63
HPS1-202ENST00000338546 WTAPQ15007 396 aa19.02■□□□□ 0.63
HPS1-202ENST00000338546 CC2D2BQ6DHV5 1058 aa19.02■□□□□ 0.63
HPS1-202ENST00000338546 NFXL1Q6ZNB6 911 aa19.02■□□□□ 0.63
HPS1-202ENST00000338546 GPT2Q8TD30 523 aa19.02■□□□□ 0.63
HPS1-202ENST00000338546 SLC16A10Q8TF71 515 aa19.02■□□□□ 0.63
HPS1-202ENST00000338546 SCAND2PQ9GZW5 306 aaPredicted RBP19.02■□□□□ 0.63
HPS1-202ENST00000338546 GZF1Q9H116 711 aaPredicted RBP19.02■□□□□ 0.63
HPS1-202ENST00000338546 MKRN1Q9UHC7 482 aaKnown RBP19.02■□□□□ 0.63
HPS1-202ENST00000338546 CNPY2Q9Y2B0 182 aa19.02■□□□□ 0.63
HPS1-202ENST00000338546 ELP1O95163 1332 aa19.01■□□□□ 0.63
HPS1-202ENST00000338546 LAMB1P07942 1786 aa19.01■□□□□ 0.63
HPS1-202ENST00000338546 GRIPAP1Q4V328 841 aa19.01■□□□□ 0.63
HPS1-202ENST00000338546 MFSD14BQ5SR56 506 aa19.01■□□□□ 0.63
HPS1-202ENST00000338546 SYAP1Q96A49 352 aaPredicted RBP19.01■□□□□ 0.63
HPS1-202ENST00000338546 UBAC1Q9BSL1 405 aa19.01■□□□□ 0.63
HPS1-202ENST00000338546 INCENPQ9NQS7 918 aa19.01■□□□□ 0.63
HPS1-202ENST00000338546 TOMM22Q9NS69 142 aa19.01■□□□□ 0.63
HPS1-202ENST00000338546 JAG2Q9Y219 1238 aa19.01■□□□□ 0.63
HPS1-202ENST00000338546 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.01■□□□□ 0.63
HPS1-202ENST00000338546 BAZ2AQ9UIF9 1905 aaKnown RBP19.01■□□□□ 0.63
HPS1-202ENST00000338546 CCDC196A0A1B0GTZ2 297 aa19■□□□□ 0.63
HPS1-202ENST00000338546 FDPSP14324 419 aaKnown RBP19■□□□□ 0.63
HPS1-202ENST00000338546 DNM1Q05193 864 aaKnown RBP19■□□□□ 0.63
HPS1-202ENST00000338546 PDE4BQ07343 736 aa19■□□□□ 0.63
HPS1-202ENST00000338546 RESTQ13127 1097 aa19■□□□□ 0.63
HPS1-202ENST00000338546 RRP12Q5JTH9 1297 aaKnown RBP19■□□□□ 0.63
HPS1-202ENST00000338546 AMOTL1Q8IY63 956 aa19■□□□□ 0.63
HPS1-202ENST00000338546 NKX2-3Q8TAU0 364 aa19■□□□□ 0.63
HPS1-202ENST00000338546 ZNF622Q969S3 477 aaKnown RBP eCLIP19■□□□□ 0.63
HPS1-202ENST00000338546 CHAMP1Q96JM3 812 aa19■□□□□ 0.63
HPS1-202ENST00000338546 RTFDC1Q9BY42 306 aaPredicted RBP19■□□□□ 0.63
HPS1-202ENST00000338546 GAKO14976 1311 aa19■□□□□ 0.63
HPS1-202ENST00000338546 MYH2Q9UKX2 1941 aa19■□□□□ 0.63
HPS1-202ENST00000338546 GOLGA6L3A6NEY3 463 aa18.99■□□□□ 0.63
HPS1-202ENST00000338546 ZNF445P59923 1031 aa18.99■□□□□ 0.63
HPS1-202ENST00000338546 IQCA1Q86XH1 822 aa18.99■□□□□ 0.63
HPS1-202ENST00000338546 STK36Q9NRP7 1315 aa18.99■□□□□ 0.63
HPS1-202ENST00000338546 ROBO3Q96MS0 1386 aa18.98■□□□□ 0.63
HPS1-202ENST00000338546 USP5P45974 858 aa18.98■□□□□ 0.63
HPS1-202ENST00000338546 SEC23AQ15436 765 aa18.98■□□□□ 0.63
HPS1-202ENST00000338546 PODNQ7Z5L7 613 aa18.98■□□□□ 0.63
HPS1-202ENST00000338546 CCDC125Q86Z20 511 aa18.98■□□□□ 0.63
HPS1-202ENST00000338546 ORC3Q9UBD5 711 aaPredicted RBP18.98■□□□□ 0.63
HPS1-202ENST00000338546 CFAP45Q9UL16 551 aa18.98■□□□□ 0.63
HPS1-202ENST00000338546 GOLGA8AA7E2F4 631 aa18.98■□□□□ 0.63
HPS1-202ENST00000338546 FKBP1AP62942 108 aaKnown RBP18.98■□□□□ 0.63
HPS1-202ENST00000338546 C12orf60Q5U649 245 aa18.98■□□□□ 0.63
HPS1-202ENST00000338546 ZSCAN10Q96SZ4 725 aaPredicted RBP18.98■□□□□ 0.63
HPS1-202ENST00000338546 IFNAR1P17181 557 aa18.97■□□□□ 0.63
HPS1-202ENST00000338546 DIXDC1Q155Q3 683 aa18.97■□□□□ 0.63
HPS1-202ENST00000338546 NTRK3Q16288 839 aa18.97■□□□□ 0.63
HPS1-202ENST00000338546 GRIK5Q16478 980 aa18.97■□□□□ 0.63
HPS1-202ENST00000338546 FOXD4L6Q3SYB3 417 aaPredicted RBP18.97■□□□□ 0.63
HPS1-202ENST00000338546 CCDC178Q5BJE1 867 aa18.97■□□□□ 0.63
HPS1-202ENST00000338546 CAVIN1Q6NZI2 390 aaKnown RBP18.97■□□□□ 0.63
HPS1-202ENST00000338546 FOXD4L3Q6VB84 417 aaPredicted RBP18.97■□□□□ 0.63
HPS1-202ENST00000338546 FERMT3Q86UX7 667 aa18.97■□□□□ 0.63
HPS1-202ENST00000338546 FBXO18Q8NFZ0 1043 aa18.97■□□□□ 0.63
HPS1-202ENST00000338546 SH3RF3Q8TEJ3 882 aaPredicted RBP18.97■□□□□ 0.63
HPS1-202ENST00000338546 WASF1Q92558 559 aa18.97■□□□□ 0.63
HPS1-202ENST00000338546 C8orf76Q96K31 380 aa18.97■□□□□ 0.63
HPS1-202ENST00000338546 ZNF287Q9HBT7 754 aa18.97■□□□□ 0.63
HPS1-202ENST00000338546 MCM9Q9NXL9 1143 aa18.97■□□□□ 0.63
HPS1-202ENST00000338546 TNKSO95271 1327 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms