RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 TXKP42681 527 aa13.14□□□□□ -0.31
SHANK2-201ENST00000338508 PDE4DQ08499 809 aa13.14□□□□□ -0.31
SHANK2-201ENST00000338508 ZNF365Q70YC5 407 aa13.14□□□□□ -0.31
SHANK2-201ENST00000338508 TTC30BQ8N4P2 665 aa13.14□□□□□ -0.31
SHANK2-201ENST00000338508 RILPQ96NA2 401 aa13.14□□□□□ -0.31
SHANK2-201ENST00000338508 SEPT10Q9P0V9 454 aa13.14□□□□□ -0.31
SHANK2-201ENST00000338508 XRCC6P12956 609 aaKnown RBP eCLIP13.14□□□□□ -0.31
SHANK2-201ENST00000338508 RDH13Q8NBN7 331 aa13.14□□□□□ -0.31
SHANK2-201ENST00000338508 IRAK4Q9NWZ3 460 aa13.14□□□□□ -0.31
SHANK2-201ENST00000338508 ARAP1Q96P48 1450 aa13.14□□□□□ -0.31
SHANK2-201ENST00000338508 A0A1B0GVL5 298 aa13.14□□□□□ -0.31
SHANK2-201ENST00000338508 CD19P15391 556 aa13.14□□□□□ -0.31
SHANK2-201ENST00000338508 NXNQ6DKJ4 435 aa13.14□□□□□ -0.31
SHANK2-201ENST00000338508 LRRC59Q96AG4 307 aaKnown RBP13.14□□□□□ -0.31
SHANK2-201ENST00000338508 TSGA10Q9BZW7 698 aa13.14□□□□□ -0.31
SHANK2-201ENST00000338508 UFL1O94874 794 aa13.14□□□□□ -0.31
SHANK2-201ENST00000338508 TFCP2Q12800 502 aa13.14□□□□□ -0.31
SHANK2-201ENST00000338508 LRMPQ12912 555 aa13.14□□□□□ -0.31
SHANK2-201ENST00000338508 ASIC2Q16515 512 aa13.14□□□□□ -0.31
SHANK2-201ENST00000338508 FAM76AQ8TAV0 307 aa13.14□□□□□ -0.31
SHANK2-201ENST00000338508 CSRNP2Q9H175 543 aa13.14□□□□□ -0.31
SHANK2-201ENST00000338508 TBC1D8O95759 1140 aa13.14□□□□□ -0.31
SHANK2-201ENST00000338508 RPS6KA2Q15349 733 aa13.14□□□□□ -0.31
SHANK2-201ENST00000338508 LIN9Q5TKA1 542 aa13.14□□□□□ -0.31
SHANK2-201ENST00000338508 AFAP1L2Q8N4X5 818 aa13.14□□□□□ -0.31
SHANK2-201ENST00000338508 RBM17Q96I25 401 aaKnown RBP13.14□□□□□ -0.31
SHANK2-201ENST00000338508 SPATA17Q96L03 361 aa13.14□□□□□ -0.31
SHANK2-201ENST00000338508 ARHGEF35A5YM69 484 aa13.13□□□□□ -0.31
SHANK2-201ENST00000338508 OATP04181 439 aa13.13□□□□□ -0.31
SHANK2-201ENST00000338508 PLCB4Q15147 1175 aa13.13□□□□□ -0.31
SHANK2-201ENST00000338508 ASIC3Q9UHC3 531 aa13.13□□□□□ -0.31
SHANK2-201ENST00000338508 ARHGEF11O15085 1522 aa13.13□□□□□ -0.31
SHANK2-201ENST00000338508 PLCG2P16885 1265 aa13.13□□□□□ -0.31
SHANK2-201ENST00000338508 NBPF11Q86T75 865 aa13.13□□□□□ -0.31
SHANK2-201ENST00000338508 VCX3BQ9H321 246 aa13.13□□□□□ -0.31
SHANK2-201ENST00000338508 ERICH3Q5RHP9 1530 aa13.13□□□□□ -0.31
SHANK2-201ENST00000338508 IGHDP01880 384 aa13.13□□□□□ -0.31
SHANK2-201ENST00000338508 PIK3AP1Q6ZUJ8 805 aa13.13□□□□□ -0.31
SHANK2-201ENST00000338508 ARHGEF10LQ9HCE6 1279 aa13.13□□□□□ -0.31
SHANK2-201ENST00000338508 ST7Q9NRC1 585 aa13.13□□□□□ -0.31
SHANK2-201ENST00000338508 NOC2LQ9Y3T9 749 aaKnown RBP13.13□□□□□ -0.31
SHANK2-201ENST00000338508 GCNT3O95395 438 aa13.13□□□□□ -0.31
SHANK2-201ENST00000338508 TYRO3Q06418 890 aa13.13□□□□□ -0.31
SHANK2-201ENST00000338508 CARD10Q9BWT7 1032 aa13.13□□□□□ -0.31
SHANK2-201ENST00000338508 ACEP12821 1306 aa13.13□□□□□ -0.31
SHANK2-201ENST00000338508 SLC12A2P55011 1212 aa13.13□□□□□ -0.31
SHANK2-201ENST00000338508 IL1RL1Q01638 556 aa13.13□□□□□ -0.31
SHANK2-201ENST00000338508 CWF19L2Q2TBE0 894 aaKnown RBP13.13□□□□□ -0.31
SHANK2-201ENST00000338508 SESTD1Q86VW0 696 aa13.13□□□□□ -0.31
SHANK2-201ENST00000338508 MCUR1Q96AQ8 359 aa13.13□□□□□ -0.31
SHANK2-201ENST00000338508 PPP2R5AQ15172 486 aa13.12□□□□□ -0.31
SHANK2-201ENST00000338508 EYA3Q99504 573 aa13.12□□□□□ -0.31
SHANK2-201ENST00000338508 NAP1L4Q99733 375 aaKnown RBP13.12□□□□□ -0.31
SHANK2-201ENST00000338508 SYNJ1O43426 1573 aa13.12□□□□□ -0.31
SHANK2-201ENST00000338508 CETN3O15182 167 aa13.12□□□□□ -0.31
SHANK2-201ENST00000338508 PRR16Q569H4 304 aa13.12□□□□□ -0.31
SHANK2-201ENST00000338508 DYMQ7RTS9 669 aa13.12□□□□□ -0.31
SHANK2-201ENST00000338508 MYCT1Q8N699 235 aa13.12□□□□□ -0.31
SHANK2-201ENST00000338508 RABGAP1Q9Y3P9 1069 aa13.12□□□□□ -0.31
SHANK2-201ENST00000338508 PAGR1Q9BTK6 254 aa13.12□□□□□ -0.31
SHANK2-201ENST00000338508 IFT140Q96RY7 1462 aa13.12□□□□□ -0.31
SHANK2-201ENST00000338508 ESYT2A0FGR8 921 aa13.12□□□□□ -0.31
SHANK2-201ENST00000338508 UVSSAQ2YD98 709 aa13.12□□□□□ -0.31
SHANK2-201ENST00000338508 SMCR8Q8TEV9 937 aaPredicted RBP13.12□□□□□ -0.31
SHANK2-201ENST00000338508 AZI2Q9H6S1 392 aa13.12□□□□□ -0.31
SHANK2-201ENST00000338508 EHBP1L1Q8N3D4 1523 aa13.12□□□□□ -0.31
SHANK2-201ENST00000338508 HECW1Q76N89 1606 aa13.12□□□□□ -0.31
SHANK2-201ENST00000338508 SYNJ2BP-COX16A0A087WUM0 186 aa13.12□□□□□ -0.31
SHANK2-201ENST00000338508 PPFIA1Q13136 1202 aa13.12□□□□□ -0.31
SHANK2-201ENST00000338508 PTPROQ16827 1216 aa13.12□□□□□ -0.31
SHANK2-201ENST00000338508 SCYL2Q6P3W7 929 aa13.12□□□□□ -0.31
SHANK2-201ENST00000338508 RSRC1Q96IZ7 334 aaKnown RBP13.12□□□□□ -0.31
SHANK2-201ENST00000338508 COX16Q9P0S2 106 aa13.12□□□□□ -0.31
SHANK2-201ENST00000338508 CALUO43852 315 aaPredicted RBP13.11□□□□□ -0.31
SHANK2-201ENST00000338508 MBD4O95243 580 aa13.11□□□□□ -0.31
SHANK2-201ENST00000338508 TRAPPC3LQ5T215 181 aa13.11□□□□□ -0.31
SHANK2-201ENST00000338508 TAB3Q8N5C8 712 aaPredicted RBP13.11□□□□□ -0.31
SHANK2-201ENST00000338508 PARD3BQ8TEW8 1205 aa13.11□□□□□ -0.31
SHANK2-201ENST00000338508 TOM1O60784 492 aa13.11□□□□□ -0.31
SHANK2-201ENST00000338508 CDAN1Q8IWY9 1227 aa13.11□□□□□ -0.31
SHANK2-201ENST00000338508 KLHL7Q8IXQ5 586 aa13.11□□□□□ -0.31
SHANK2-201ENST00000338508 GOLGA6CA6NDK9 693 aa13.11□□□□□ -0.31
SHANK2-201ENST00000338508 GOLGA6BA6NDN3 693 aa13.11□□□□□ -0.31
SHANK2-201ENST00000338508 B4E1Z4 1266 aa13.11□□□□□ -0.31
SHANK2-201ENST00000338508 GOLGA6DP0CG33 693 aa13.11□□□□□ -0.31
SHANK2-201ENST00000338508 ATP5DP30049 168 aa13.11□□□□□ -0.31
SHANK2-201ENST00000338508 CCDC62Q6P9F0 684 aa13.11□□□□□ -0.31
SHANK2-201ENST00000338508 AATFQ9NY61 560 aaKnown RBP eCLIP13.11□□□□□ -0.31
SHANK2-201ENST00000338508 GOLGA6AQ9NYA3 693 aa13.11□□□□□ -0.31
SHANK2-201ENST00000338508 MSH6P52701 1360 aa13.11□□□□□ -0.31
SHANK2-201ENST00000338508 DTNBO60941 627 aa13.11□□□□□ -0.31
SHANK2-201ENST00000338508 F13A1P00488 732 aa13.11□□□□□ -0.31
SHANK2-201ENST00000338508 TBC1D8BQ0IIM8 1120 aa13.11□□□□□ -0.31
SHANK2-201ENST00000338508 ARHGAP44Q17R89 818 aa13.11□□□□□ -0.31
SHANK2-201ENST00000338508 HHATQ5VTY9 493 aa13.11□□□□□ -0.31
SHANK2-201ENST00000338508 SPDYE2BA6NHP3 402 aa13.11□□□□□ -0.31
SHANK2-201ENST00000338508 BUB1BO60566 1050 aaPredicted RBP13.11□□□□□ -0.31
SHANK2-201ENST00000338508 SPDYE6P0CI01 402 aa13.11□□□□□ -0.31
SHANK2-201ENST00000338508 IL15P40933 162 aaPredicted RBP13.11□□□□□ -0.31
SHANK2-201ENST00000338508 POMGNT1Q8WZA1 660 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms