RNA–Protein interactions for RNA: ENST00000338176.8

RAB28-203, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 3 BASIC

Gene RAB28, Length 1,787 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-203ENST00000338176 DCAF15Q66K64 600 aa25.62■■□□□ 1.69
RAB28-203ENST00000338176 NAA16Q6N069 864 aaPredicted RBP25.62■■□□□ 1.69
RAB28-203ENST00000338176 OTUD5Q96G74 571 aa25.62■■□□□ 1.69
RAB28-203ENST00000338176 ZNF341Q9BYN7 854 aa25.62■■□□□ 1.69
RAB28-203ENST00000338176 ENTPD3O75355 529 aa25.61■■□□□ 1.69
RAB28-203ENST00000338176 IFNL1Q8IU54 200 aa25.61■■□□□ 1.69
RAB28-203ENST00000338176 ZSCAN29Q8IWY8 852 aaPredicted RBP25.61■■□□□ 1.69
RAB28-203ENST00000338176 DOCK2Q92608 1830 aa25.61■■□□□ 1.69
RAB28-203ENST00000338176 ATRNL1Q5VV63 1379 aa25.61■■□□□ 1.69
RAB28-203ENST00000338176 CLASRPQ8N2M8 674 aaKnown RBP25.61■■□□□ 1.69
RAB28-203ENST00000338176 SH3RF3Q8TEJ3 882 aaPredicted RBP25.61■■□□□ 1.69
RAB28-203ENST00000338176 HOOK2Q96ED9 719 aa25.61■■□□□ 1.69
RAB28-203ENST00000338176 PTPN18Q99952 460 aa25.61■■□□□ 1.69
RAB28-203ENST00000338176 MS4A4AQ96JQ5 239 aa25.6■■□□□ 1.69
RAB28-203ENST00000338176 AATFQ9NY61 560 aaKnown RBP eCLIP25.6■■□□□ 1.69
RAB28-203ENST00000338176 SMARCA5O60264 1052 aaPredicted RBP25.59■■□□□ 1.69
RAB28-203ENST00000338176 RAB11FIP3O75154 756 aa25.59■■□□□ 1.69
RAB28-203ENST00000338176 ZNF112Q9UJU3 913 aa25.59■■□□□ 1.69
RAB28-203ENST00000338176 SPDYE5A6NIY4 337 aa25.58■■□□□ 1.69
RAB28-203ENST00000338176 IDH1O75874 414 aaKnown RBP25.58■■□□□ 1.69
RAB28-203ENST00000338176 IFIT2P09913 472 aaKnown RBP25.58■■□□□ 1.69
RAB28-203ENST00000338176 TEX11Q8IYF3 940 aa25.58■■□□□ 1.69
RAB28-203ENST00000338176 BRI3BPQ8WY22 251 aa25.57■■□□□ 1.68
RAB28-203ENST00000338176 FAM196BA6NMK8 535 aa25.56■■□□□ 1.68
RAB28-203ENST00000338176 INHBEP58166 350 aa25.56■■□□□ 1.68
RAB28-203ENST00000338176 DYNLL1P63167 89 aaKnown RBP25.56■■□□□ 1.68
RAB28-203ENST00000338176 ZNF296Q8WUU4 475 aaPredicted RBP25.56■■□□□ 1.68
RAB28-203ENST00000338176 MCOLN1Q9GZU1 580 aa25.56■■□□□ 1.68
RAB28-203ENST00000338176 PCDHB15Q9Y5E8 787 aa25.56■■□□□ 1.68
RAB28-203ENST00000338176 CDK5RAP2Q96SN8 1893 aa25.56■■□□□ 1.68
RAB28-203ENST00000338176 CYP7A1P22680 504 aa25.56■■□□□ 1.68
RAB28-203ENST00000338176 DGKZQ13574 1117 aa25.56■■□□□ 1.68
RAB28-203ENST00000338176 ERO1BQ86YB8 467 aa25.56■■□□□ 1.68
RAB28-203ENST00000338176 TESPA1A2RU30 521 aaPredicted RBP25.55■■□□□ 1.68
RAB28-203ENST00000338176 PHF20L1A8MW92 1017 aa25.55■■□□□ 1.68
RAB28-203ENST00000338176 IRF6O14896 467 aa25.55■■□□□ 1.68
RAB28-203ENST00000338176 MAGEB6Q8N7X4 407 aa25.55■■□□□ 1.68
RAB28-203ENST00000338176 EDC3Q96F86 508 aaKnown RBP25.55■■□□□ 1.68
RAB28-203ENST00000338176 ABHD8Q96I13 439 aa25.55■■□□□ 1.68
RAB28-203ENST00000338176 CCL15-CCL14A0A0B4J2E2 113 aa25.54■■□□□ 1.68
RAB28-203ENST00000338176 GPR25O00155 361 aa25.54■■□□□ 1.68
RAB28-203ENST00000338176 CCL15Q16663 113 aa25.54■■□□□ 1.68
RAB28-203ENST00000338176 CRBNQ96SW2 442 aa25.54■■□□□ 1.68
RAB28-203ENST00000338176 NOL10Q9BSC4 688 aaKnown RBP25.54■■□□□ 1.68
RAB28-203ENST00000338176 OSBPL5Q9H0X9 879 aaPredicted RBP25.54■■□□□ 1.68
RAB28-203ENST00000338176 MIGA1Q8NAN2 632 aa25.54■■□□□ 1.68
RAB28-203ENST00000338176 DNAJC2Q99543 621 aaKnown RBP25.54■■□□□ 1.68
RAB28-203ENST00000338176 GTF2A2P52657 109 aa25.53■■□□□ 1.68
RAB28-203ENST00000338176 PPP4CP60510 307 aa25.53■■□□□ 1.68
RAB28-203ENST00000338176 MAPKAPK5Q8IW41 473 aa25.53■■□□□ 1.68
RAB28-203ENST00000338176 TGFBRAP1Q8WUH2 860 aa25.53■■□□□ 1.68
RAB28-203ENST00000338176 LRRCC1Q9C099 1032 aa25.53■■□□□ 1.68
RAB28-203ENST00000338176 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.53■■□□□ 1.68
RAB28-203ENST00000338176 BAG3O95817 575 aa25.52■■□□□ 1.68
RAB28-203ENST00000338176 PPIL2Q13356 520 aa25.52■■□□□ 1.68
RAB28-203ENST00000338176 CFHR5Q9BXR6 569 aa25.52■■□□□ 1.68
RAB28-203ENST00000338176 GOLIM4O00461 696 aa25.51■■□□□ 1.67
RAB28-203ENST00000338176 NPM3O75607 178 aaKnown RBP25.51■■□□□ 1.67
RAB28-203ENST00000338176 ALDH1A1P00352 501 aa25.51■■□□□ 1.67
RAB28-203ENST00000338176 MAP3K10Q02779 954 aa25.51■■□□□ 1.67
RAB28-203ENST00000338176 CRHR2Q13324 411 aa25.51■■□□□ 1.67
RAB28-203ENST00000338176 FAM43AQ8N2R8 423 aa25.51■■□□□ 1.67
RAB28-203ENST00000338176 BOLA2Q9H3K6 86 aa25.51■■□□□ 1.67
RAB28-203ENST00000338176 MAP4K4O95819 1239 aaPredicted RBP25.51■■□□□ 1.67
RAB28-203ENST00000338176 NOL9Q5SY16 702 aaKnown RBP25.51■■□□□ 1.67
RAB28-203ENST00000338176 DCTPP1Q9H773 170 aa25.51■■□□□ 1.67
RAB28-203ENST00000338176 SIPA1L1O43166 1804 aa25.5■■□□□ 1.67
RAB28-203ENST00000338176 FOCADQ5VW36 1801 aa25.49■■□□□ 1.67
RAB28-203ENST00000338176 PPATQ06203 517 aa25.49■■□□□ 1.67
RAB28-203ENST00000338176 MAP3K12Q12852 859 aa25.49■■□□□ 1.67
RAB28-203ENST00000338176 SLC4A8Q2Y0W8 1093 aa25.49■■□□□ 1.67
RAB28-203ENST00000338176 CCDC84Q86UT8 332 aaPredicted RBP25.49■■□□□ 1.67
RAB28-203ENST00000338176 FLT1P17948 1338 aa25.49■■□□□ 1.67
RAB28-203ENST00000338176 SLFNL1Q499Z3 407 aa25.49■■□□□ 1.67
RAB28-203ENST00000338176 SAP30BPQ9UHR5 308 aaKnown RBP25.49■■□□□ 1.67
RAB28-203ENST00000338176 PLCG2P16885 1265 aa25.48■■□□□ 1.67
RAB28-203ENST00000338176 SNAPC2Q13487 334 aa25.48■■□□□ 1.67
RAB28-203ENST00000338176 RRP1BQ14684 758 aaKnown RBP25.48■■□□□ 1.67
RAB28-203ENST00000338176 OTUD7BQ6GQQ9 843 aa25.48■■□□□ 1.67
RAB28-203ENST00000338176 SCYL3Q8IZE3 742 aa25.48■■□□□ 1.67
RAB28-203ENST00000338176 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.48■■□□□ 1.67
RAB28-203ENST00000338176 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.48■■□□□ 1.67
RAB28-203ENST00000338176 BTBD19C9JJ37 291 aa25.47■■□□□ 1.67
RAB28-203ENST00000338176 FKTNO75072 461 aa25.47■■□□□ 1.67
RAB28-203ENST00000338176 PALD1Q9ULE6 856 aa25.47■■□□□ 1.67
RAB28-203ENST00000338176 COL2A1P02458 1487 aaPredicted RBP25.47■■□□□ 1.67
RAB28-203ENST00000338176 CETPP11597 493 aa25.46■■□□□ 1.67
RAB28-203ENST00000338176 PDE6AP16499 860 aa25.46■■□□□ 1.67
RAB28-203ENST00000338176 ATP5JP18859 108 aa25.46■■□□□ 1.67
RAB28-203ENST00000338176 CTU1Q7Z7A3 348 aaKnown RBP25.46■■□□□ 1.67
RAB28-203ENST00000338176 DOCK1Q14185 1865 aa25.46■■□□□ 1.67
RAB28-203ENST00000338176 CHGBP05060 677 aa25.46■■□□□ 1.67
RAB28-203ENST00000338176 TTF1Q15361 905 aaPredicted RBP25.46■■□□□ 1.67
RAB28-203ENST00000338176 NOM1Q5C9Z4 860 aaKnown RBP25.46■■□□□ 1.67
RAB28-203ENST00000338176 SLC9C2Q5TAH2 1124 aa25.46■■□□□ 1.67
RAB28-203ENST00000338176 TSHZ3Q63HK5 1081 aa25.46■■□□□ 1.67
RAB28-203ENST00000338176 ZHX2Q9Y6X8 837 aa25.46■■□□□ 1.67
RAB28-203ENST00000338176 TBC1D12O60347 775 aa25.45■■□□□ 1.66
RAB28-203ENST00000338176 PTPRAP18433 802 aa25.45■■□□□ 1.66
RAB28-203ENST00000338176 TAF1CQ15572 869 aaPredicted RBP25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms