RNA–Protein interactions for RNA: ENST00000334475.10

TREM1-202, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TREM1, Length 1,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-202ENST00000334475 CACNA1SQ13698 1873 aa10.49□□□□□ -0.73
TREM1-202ENST00000334475 GOLGA6L4A6NEF3 574 aa10.48□□□□□ -0.73
TREM1-202ENST00000334475 FAM177BA6PVY3 158 aa10.48□□□□□ -0.73
TREM1-202ENST00000334475 CDKL5O76039 1030 aa10.48□□□□□ -0.73
TREM1-202ENST00000334475 CTDNEP1O95476 244 aa10.48□□□□□ -0.73
TREM1-202ENST00000334475 APLP1P51693 650 aa10.48□□□□□ -0.73
TREM1-202ENST00000334475 PDAP1Q13442 181 aaKnown RBP10.48□□□□□ -0.73
TREM1-202ENST00000334475 ERFEQ4G0M1 354 aa10.48□□□□□ -0.73
TREM1-202ENST00000334475 CPLX2Q6PUV4 134 aaKnown RBP10.48□□□□□ -0.73
TREM1-202ENST00000334475 HELBQ8NG08 1087 aaPredicted RBP10.48□□□□□ -0.73
TREM1-202ENST00000334475 ARHGEF1Q92888 912 aaKnown RBP10.48□□□□□ -0.73
TREM1-202ENST00000334475 SPATA32Q96LK8 384 aa10.48□□□□□ -0.73
TREM1-202ENST00000334475 NACAP1Q9BZK3 213 aa10.48□□□□□ -0.73
TREM1-202ENST00000334475 KRT23Q9C075 422 aa10.48□□□□□ -0.73
TREM1-202ENST00000334475 ANKRD2Q9GZV1 360 aa10.48□□□□□ -0.73
TREM1-202ENST00000334475 DENND2AQ9ULE3 1009 aa10.48□□□□□ -0.73
TREM1-202ENST00000334475 ANGEL1Q9UNK9 670 aaKnown RBP10.48□□□□□ -0.73
TREM1-202ENST00000334475 COLQQ9Y215 455 aaPredicted RBP10.48□□□□□ -0.73
TREM1-202ENST00000334475 BCS1LQ9Y276 419 aa10.48□□□□□ -0.73
TREM1-202ENST00000334475 RTCBQ9Y3I0 505 aaKnown RBP10.48□□□□□ -0.73
TREM1-202ENST00000334475 TAF1P21675 1872 aa10.47□□□□□ -0.73
TREM1-202ENST00000334475 KLF18A0A0U1RQI7 1052 aa10.47□□□□□ -0.73
TREM1-202ENST00000334475 SH2B2O14492 632 aaPredicted RBP10.47□□□□□ -0.73
TREM1-202ENST00000334475 ZPR1O75312 459 aa10.47□□□□□ -0.73
TREM1-202ENST00000334475 TOMM70O94826 608 aa10.47□□□□□ -0.73
TREM1-202ENST00000334475 GYS1P13807 737 aa10.47□□□□□ -0.73
TREM1-202ENST00000334475 GTF2E1P29083 439 aaPredicted RBP10.47□□□□□ -0.73
TREM1-202ENST00000334475 LIFRP42702 1097 aa10.47□□□□□ -0.73
TREM1-202ENST00000334475 PSEN1P49768 467 aa10.47□□□□□ -0.73
TREM1-202ENST00000334475 RCAN1P53805 252 aa10.47□□□□□ -0.73
TREM1-202ENST00000334475 ANTXR2P58335 489 aa10.47□□□□□ -0.73
TREM1-202ENST00000334475 HAND2P61296 217 aa10.47□□□□□ -0.73
TREM1-202ENST00000334475 CAVIN4Q5BKX8 364 aa10.47□□□□□ -0.73
TREM1-202ENST00000334475 ARHGAP27Q6ZUM4 889 aa10.47□□□□□ -0.73
TREM1-202ENST00000334475 FERMT3Q86UX7 667 aa10.47□□□□□ -0.73
TREM1-202ENST00000334475 SGMS1Q86VZ5 419 aa10.47□□□□□ -0.73
TREM1-202ENST00000334475 IFNL3Q8IZI9 196 aa10.47□□□□□ -0.73
TREM1-202ENST00000334475 MAGEB6Q8N7X4 407 aa10.47□□□□□ -0.73
TREM1-202ENST00000334475 LEO1Q8WVC0 666 aaPredicted RBP10.47□□□□□ -0.73
TREM1-202ENST00000334475 NLRP3Q96P20 1036 aa10.47□□□□□ -0.73
TREM1-202ENST00000334475 SETDB2Q96T68 719 aa10.47□□□□□ -0.73
TREM1-202ENST00000334475 NAPBQ9H115 298 aa10.47□□□□□ -0.73
TREM1-202ENST00000334475 RNF41Q9H4P4 317 aaPredicted RBP10.47□□□□□ -0.73
TREM1-202ENST00000334475 BCL2L12Q9HB09 334 aa10.47□□□□□ -0.73
TREM1-202ENST00000334475 COL4A1P02462 1669 aa10.47□□□□□ -0.73
TREM1-202ENST00000334475 GOLGA8BA8MQT2 603 aa10.46□□□□□ -0.73
TREM1-202ENST00000334475 CPLX1O14810 134 aa10.46□□□□□ -0.73
TREM1-202ENST00000334475 MBD4O95243 580 aa10.46□□□□□ -0.73
TREM1-202ENST00000334475 APPP05067 770 aa10.46□□□□□ -0.73
TREM1-202ENST00000334475 PCP11498 1178 aaKnown RBP10.46□□□□□ -0.73
TREM1-202ENST00000334475 CLCN1P35523 988 aa10.46□□□□□ -0.73
TREM1-202ENST00000334475 NT5C2P49902 561 aa10.46□□□□□ -0.73
TREM1-202ENST00000334475 CCT2P78371 535 aaKnown RBP10.46□□□□□ -0.73
TREM1-202ENST00000334475 DDR1Q08345 913 aa10.46□□□□□ -0.73
TREM1-202ENST00000334475 C9orf131Q5VYM1 1079 aa10.46□□□□□ -0.73
TREM1-202ENST00000334475 TBC1D9BQ66K14 1250 aa10.46□□□□□ -0.73
TREM1-202ENST00000334475 TPTE2Q6XPS3 522 aa10.46□□□□□ -0.73
TREM1-202ENST00000334475 BRAPQ7Z569 592 aa10.46□□□□□ -0.73
TREM1-202ENST00000334475 STAG1Q8WVM7 1258 aa10.46□□□□□ -0.73
TREM1-202ENST00000334475 DDX11Q96FC9 970 aa10.46□□□□□ -0.73
TREM1-202ENST00000334475 FUCA2Q9BTY2 467 aa10.46□□□□□ -0.73
TREM1-202ENST00000334475 NBPF3Q9H094 633 aa10.46□□□□□ -0.73
TREM1-202ENST00000334475 NUP62CLQ9H1M0 184 aa10.46□□□□□ -0.73
TREM1-202ENST00000334475 SRP68Q9UHB9 627 aaKnown RBP10.46□□□□□ -0.73
TREM1-202ENST00000334475 RCOR1Q9UKL0 485 aa10.46□□□□□ -0.73
TREM1-202ENST00000334475 STK36Q9NRP7 1315 aa10.46□□□□□ -0.73
TREM1-202ENST00000334475 TNRC6CQ9HCJ0 1690 aaKnown RBP10.46□□□□□ -0.74
TREM1-202ENST00000334475 ESPNB1AK53 854 aa10.45□□□□□ -0.74
TREM1-202ENST00000334475 POTEJP0CG39 1038 aa10.45□□□□□ -0.74
TREM1-202ENST00000334475 BCAMP50895 628 aa10.45□□□□□ -0.74
TREM1-202ENST00000334475 AKNAD1Q5T1N1 836 aa10.45□□□□□ -0.74
TREM1-202ENST00000334475 GIMAP6Q6P9H5 292 aa10.45□□□□□ -0.74
TREM1-202ENST00000334475 RBM43Q6ZSC3 357 aaKnown RBP10.45□□□□□ -0.74
TREM1-202ENST00000334475 NBPF5PQ86XG9 351 aaPredicted RBP10.45□□□□□ -0.74
TREM1-202ENST00000334475 TBC1D10CQ8IV04 446 aa10.45□□□□□ -0.74
TREM1-202ENST00000334475 JMYQ8N9B5 988 aa10.45□□□□□ -0.74
TREM1-202ENST00000334475 EPB41L4AQ9HCS5 686 aaPredicted RBP10.45□□□□□ -0.74
TREM1-202ENST00000334475 LRP2BPQ9P2M1 347 aa10.45□□□□□ -0.74
TREM1-202ENST00000334475 ANAPC4Q9UJX5 808 aa10.45□□□□□ -0.74
TREM1-202ENST00000334475 NAP1L2Q9ULW6 460 aaPredicted RBP10.45□□□□□ -0.74
TREM1-202ENST00000334475 MINPP1Q9UNW1 487 aa10.45□□□□□ -0.74
TREM1-202ENST00000334475 HPS5Q9UPZ3 1129 aa10.45□□□□□ -0.74
TREM1-202ENST00000334475 SBF1O95248 1867 aa10.44□□□□□ -0.74
TREM1-202ENST00000334475 ARFGEF1Q9Y6D6 1849 aa10.44□□□□□ -0.74
TREM1-202ENST00000334475 GSG1L2A8MUP6 293 aa10.44□□□□□ -0.74
TREM1-202ENST00000334475 CTAGE5O15320 804 aa10.44□□□□□ -0.74
TREM1-202ENST00000334475 CAVIN2O95810 425 aa10.44□□□□□ -0.74
TREM1-202ENST00000334475 CCDC192P0DO97 292 aa10.44□□□□□ -0.74
TREM1-202ENST00000334475 FDPSP14324 419 aaKnown RBP10.44□□□□□ -0.74
TREM1-202ENST00000334475 PLCG2P16885 1265 aa10.44□□□□□ -0.74
TREM1-202ENST00000334475 CHRNA5P30532 468 aa10.44□□□□□ -0.74
TREM1-202ENST00000334475 METAP2P50579 478 aaKnown RBP eCLIP10.44□□□□□ -0.74
TREM1-202ENST00000334475 TGFB2P61812 414 aa10.44□□□□□ -0.74
TREM1-202ENST00000334475 RPS8P62241 208 aaKnown RBP10.44□□□□□ -0.74
TREM1-202ENST00000334475 IRX5P78411 483 aaPredicted RBP10.44□□□□□ -0.74
TREM1-202ENST00000334475 SART3Q15020 963 aaKnown RBP10.44□□□□□ -0.74
TREM1-202ENST00000334475 MAP3K11Q16584 847 aa10.44□□□□□ -0.74
TREM1-202ENST00000334475 TRAPPC3LQ5T215 181 aa10.44□□□□□ -0.74
TREM1-202ENST00000334475 MFSD6Q6ZSS7 791 aa10.44□□□□□ -0.74
TREM1-202ENST00000334475 CHST3Q7LGC8 479 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms