RNA–Protein interactions for RNA: ENST00000333617.8

LSAMP-201, Transcript of limbic system associated membrane protein, humanhuman

TSL 2

Gene LSAMP, Length 1,561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-201ENST00000333617 ADD2P35612 726 aa10.31□□□□□ -0.76
LSAMP-201ENST00000333617 ERFEQ4G0M1 354 aa10.31□□□□□ -0.76
LSAMP-201ENST00000333617 STOX1Q6ZVD7 989 aa10.31□□□□□ -0.76
LSAMP-201ENST00000333617 DHX32Q7L7V1 743 aaKnown RBP10.31□□□□□ -0.76
LSAMP-201ENST00000333617 CHAMP1Q96JM3 812 aa10.31□□□□□ -0.76
LSAMP-201ENST00000333617 NARFQ9UHQ1 456 aa10.31□□□□□ -0.76
LSAMP-201ENST00000333617 MYH6P13533 1939 aa10.31□□□□□ -0.76
LSAMP-201ENST00000333617 BAZ2AQ9UIF9 1905 aaKnown RBP10.31□□□□□ -0.76
LSAMP-201ENST00000333617 MYH2Q9UKX2 1941 aa10.31□□□□□ -0.76
LSAMP-201ENST00000333617 E7EWF7 191 aa10.31□□□□□ -0.76
LSAMP-201ENST00000333617 GPAA1O43292 621 aa10.31□□□□□ -0.76
LSAMP-201ENST00000333617 GTF2E1P29083 439 aaPredicted RBP10.31□□□□□ -0.76
LSAMP-201ENST00000333617 FGD1P98174 961 aa10.31□□□□□ -0.76
LSAMP-201ENST00000333617 SF3B3Q15393 1217 aaKnown RBP10.31□□□□□ -0.76
LSAMP-201ENST00000333617 FAM182BQ5T319 152 aa10.31□□□□□ -0.76
LSAMP-201ENST00000333617 SLC9C2Q5TAH2 1124 aa10.31□□□□□ -0.76
LSAMP-201ENST00000333617 TBC1D9BQ66K14 1250 aa10.31□□□□□ -0.76
LSAMP-201ENST00000333617 BICDL1Q6ZP65 573 aa10.31□□□□□ -0.76
LSAMP-201ENST00000333617 SULF1Q8IWU6 871 aa10.31□□□□□ -0.76
LSAMP-201ENST00000333617 SPATA5Q8NB90 893 aa10.31□□□□□ -0.76
LSAMP-201ENST00000333617 NYXQ9GZU5 481 aa10.31□□□□□ -0.76
LSAMP-201ENST00000333617 PUS7LQ9H0K6 701 aaKnown RBP10.31□□□□□ -0.76
LSAMP-201ENST00000333617 PIH1D3Q9NQM4 214 aaKnown RBP10.31□□□□□ -0.76
LSAMP-201ENST00000333617 TRPC5Q9UL62 973 aaPredicted RBP10.31□□□□□ -0.76
LSAMP-201ENST00000333617 ATP6V1DQ9Y5K8 247 aa10.31□□□□□ -0.76
LSAMP-201ENST00000333617 TLL1O43897 1013 aa10.3□□□□□ -0.76
LSAMP-201ENST00000333617 IDH1O75874 414 aaKnown RBP10.3□□□□□ -0.76
LSAMP-201ENST00000333617 MBD3O95983 291 aa10.3□□□□□ -0.76
LSAMP-201ENST00000333617 F13A1P00488 732 aa10.3□□□□□ -0.76
LSAMP-201ENST00000333617 PDCP20941 246 aa10.3□□□□□ -0.76
LSAMP-201ENST00000333617 HSPA1LP34931 641 aa10.3□□□□□ -0.76
LSAMP-201ENST00000333617 CHRNDQ07001 517 aa10.3□□□□□ -0.76
LSAMP-201ENST00000333617 MAP2K5Q13163 448 aa10.3□□□□□ -0.76
LSAMP-201ENST00000333617 UBE3CQ15386 1083 aa10.3□□□□□ -0.76
LSAMP-201ENST00000333617 IMMTQ16891 758 aaKnown RBP10.3□□□□□ -0.76
LSAMP-201ENST00000333617 ANKRD18AQ8IVF6 992 aa10.3□□□□□ -0.76
LSAMP-201ENST00000333617 GPT2Q8TD30 523 aa10.3□□□□□ -0.76
LSAMP-201ENST00000333617 NLRP7Q8WX94 980 aa10.3□□□□□ -0.76
LSAMP-201ENST00000333617 GTF3C6Q969F1 213 aa10.3□□□□□ -0.76
LSAMP-201ENST00000333617 SETDB2Q96T68 719 aa10.3□□□□□ -0.76
LSAMP-201ENST00000333617 PHOX2BQ99453 314 aa10.3□□□□□ -0.76
LSAMP-201ENST00000333617 RTCBQ9Y3I0 505 aaKnown RBP10.3□□□□□ -0.76
LSAMP-201ENST00000333617 A0A0G2JLW4 131 aa10.29□□□□□ -0.76
LSAMP-201ENST00000333617 FOXP2O15409 715 aa10.29□□□□□ -0.76
LSAMP-201ENST00000333617 FGAP02671 866 aa10.29□□□□□ -0.76
LSAMP-201ENST00000333617 MRE11P49959 708 aa10.29□□□□□ -0.76
LSAMP-201ENST00000333617 EXOSC10Q01780 885 aaKnown RBP10.29□□□□□ -0.76
LSAMP-201ENST00000333617 STK3Q13188 491 aa10.29□□□□□ -0.76
LSAMP-201ENST00000333617 RASGRF1Q13972 1273 aa10.29□□□□□ -0.76
LSAMP-201ENST00000333617 FOXD4L6Q3SYB3 417 aaPredicted RBP10.29□□□□□ -0.76
LSAMP-201ENST00000333617 SLC10A5Q5PT55 438 aa10.29□□□□□ -0.76
LSAMP-201ENST00000333617 TTLL5Q6EMB2 1281 aa10.29□□□□□ -0.76
LSAMP-201ENST00000333617 CAVIN1Q6NZI2 390 aaKnown RBP10.29□□□□□ -0.76
LSAMP-201ENST00000333617 FOXD4L3Q6VB84 417 aaPredicted RBP10.29□□□□□ -0.76
LSAMP-201ENST00000333617 SMIM5Q71RC9 77 aa10.29□□□□□ -0.76
LSAMP-201ENST00000333617 BRF1Q92994 677 aa10.29□□□□□ -0.76
LSAMP-201ENST00000333617 SRP68Q9UHB9 627 aaKnown RBP10.29□□□□□ -0.76
LSAMP-201ENST00000333617 MTMR6Q9Y217 621 aa10.29□□□□□ -0.76
LSAMP-201ENST00000333617 TNRC6CQ9HCJ0 1690 aaKnown RBP10.28□□□□□ -0.76
LSAMP-201ENST00000333617 ZNF532Q9HCE3 1301 aa10.28□□□□□ -0.76
LSAMP-201ENST00000333617 ECM29Q5VYK3 1845 aa10.28□□□□□ -0.76
LSAMP-201ENST00000333617 VPS37CA5D8V6 355 aaPredicted RBP10.28□□□□□ -0.76
LSAMP-201ENST00000333617 SNAP23O00161 211 aa10.28□□□□□ -0.76
LSAMP-201ENST00000333617 PDE6AP16499 860 aa10.28□□□□□ -0.76
LSAMP-201ENST00000333617 MAP3K12Q12852 859 aa10.28□□□□□ -0.76
LSAMP-201ENST00000333617 LARP1BQ659C4 914 aaKnown RBP10.28□□□□□ -0.76
LSAMP-201ENST00000333617 LRRC2Q9BYS8 371 aa10.28□□□□□ -0.76
LSAMP-201ENST00000333617 AGXT2Q9BYV1 514 aa10.28□□□□□ -0.76
LSAMP-201ENST00000333617 CACNA1SQ13698 1873 aa10.28□□□□□ -0.76
LSAMP-201ENST00000333617 TCRBV5S4A2TA0A5A2 114 aa10.27□□□□□ -0.76
LSAMP-201ENST00000333617 ZNF213O14771 459 aa10.27□□□□□ -0.76
LSAMP-201ENST00000333617 DTNBO60941 627 aa10.27□□□□□ -0.76
LSAMP-201ENST00000333617 ADH1BP00325 375 aa10.27□□□□□ -0.76
LSAMP-201ENST00000333617 XRCC6P12956 609 aaKnown RBP eCLIP10.27□□□□□ -0.76
LSAMP-201ENST00000333617 ZNF445P59923 1031 aa10.27□□□□□ -0.76
LSAMP-201ENST00000333617 HAND2P61296 217 aa10.27□□□□□ -0.76
LSAMP-201ENST00000333617 USP48Q86UV5 1035 aa10.27□□□□□ -0.76
LSAMP-201ENST00000333617 NBPF5PQ86XG9 351 aaPredicted RBP10.27□□□□□ -0.76
LSAMP-201ENST00000333617 SEPT12Q8IYM1 358 aa10.27□□□□□ -0.76
LSAMP-201ENST00000333617 TMEM87AQ8NBN3 555 aa10.27□□□□□ -0.76
LSAMP-201ENST00000333617 NLRP3Q96P20 1036 aa10.27□□□□□ -0.76
LSAMP-201ENST00000333617 GRPEL1Q9HAV7 217 aa10.27□□□□□ -0.76
LSAMP-201ENST00000333617 BSDC1Q9NW68 430 aaPredicted RBP10.27□□□□□ -0.76
LSAMP-201ENST00000333617 WWC3Q9ULE0 1092 aa10.27□□□□□ -0.76
LSAMP-201ENST00000333617 KIAA1551Q9HCM1 1747 aa10.27□□□□□ -0.77
LSAMP-201ENST00000333617 PFKFB2O60825 505 aa10.26□□□□□ -0.77
LSAMP-201ENST00000333617 UBE4AQ14139 1066 aa10.26□□□□□ -0.77
LSAMP-201ENST00000333617 ZSCAN23Q3MJ62 389 aa10.26□□□□□ -0.77
LSAMP-201ENST00000333617 TPTE2Q6XPS3 522 aa10.26□□□□□ -0.77
LSAMP-201ENST00000333617 SCUBE3Q8IX30 993 aa10.26□□□□□ -0.77
LSAMP-201ENST00000333617 FBXL16Q8N461 479 aa10.26□□□□□ -0.77
LSAMP-201ENST00000333617 MAGEB6Q8N7X4 407 aa10.26□□□□□ -0.77
LSAMP-201ENST00000333617 AIDAQ96BJ3 306 aa10.26□□□□□ -0.77
LSAMP-201ENST00000333617 LLPHQ9BRT6 129 aaKnown RBP10.26□□□□□ -0.77
LSAMP-201ENST00000333617 GDPD2Q9HCC8 539 aa10.26□□□□□ -0.77
LSAMP-201ENST00000333617 GNL3LQ9NVN8 582 aaKnown RBP10.26□□□□□ -0.77
LSAMP-201ENST00000333617 BRPF3Q9ULD4 1205 aa10.26□□□□□ -0.77
LSAMP-201ENST00000333617 MAST2Q6P0Q8 1798 aa10.26□□□□□ -0.77
LSAMP-201ENST00000333617 RNF223E7ERA6 249 aa10.26□□□□□ -0.77
LSAMP-201ENST00000333617 IRF6O14896 467 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms