RNA–Protein interactions for RNA: ENST00000332814.6

C11orf88-201, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS P4 TSL 5 BASIC

Gene C11orf88, Length 795 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-201ENST00000332814 DOCK2Q92608 1830 aa19.83■□□□□ 0.76
C11orf88-201ENST00000332814 ZNF532Q9HCE3 1301 aa19.82■□□□□ 0.76
C11orf88-201ENST00000332814 MAGEB6P1A0A0J9YX57 407 aa19.82■□□□□ 0.76
C11orf88-201ENST00000332814 UNCXA6NJT0 531 aa19.82■□□□□ 0.76
C11orf88-201ENST00000332814 USP2O75604 605 aaPredicted RBP19.82■□□□□ 0.76
C11orf88-201ENST00000332814 NPM3O75607 178 aaKnown RBP19.82■□□□□ 0.76
C11orf88-201ENST00000332814 MAP2K1Q02750 393 aaPredicted RBP19.82■□□□□ 0.76
C11orf88-201ENST00000332814 OTUD7AQ8TE49 926 aaPredicted RBP19.82■□□□□ 0.76
C11orf88-201ENST00000332814 SLC10A4Q96EP9 437 aa19.82■□□□□ 0.76
C11orf88-201ENST00000332814 ZNF341Q9BYN7 854 aa19.82■□□□□ 0.76
C11orf88-201ENST00000332814 DDX4Q9NQI0 724 aaKnown RBP19.82■□□□□ 0.76
C11orf88-201ENST00000332814 CSADQ9Y600 493 aa19.82■□□□□ 0.76
C11orf88-201ENST00000332814 NEFLP07196 543 aa19.81■□□□□ 0.76
C11orf88-201ENST00000332814 USP5P45974 858 aa19.81■□□□□ 0.76
C11orf88-201ENST00000332814 DYNLL1P63167 89 aaKnown RBP19.81■□□□□ 0.76
C11orf88-201ENST00000332814 LRRFIP1Q32MZ4 808 aaKnown RBP19.81■□□□□ 0.76
C11orf88-201ENST00000332814 LDLRAD1Q5T700 205 aa19.81■□□□□ 0.76
C11orf88-201ENST00000332814 MIGA2Q7L4E1 593 aa19.81■□□□□ 0.76
C11orf88-201ENST00000332814 CHD1LQ86WJ1 897 aa19.81■□□□□ 0.76
C11orf88-201ENST00000332814 TGFBRAP1Q8WUH2 860 aa19.81■□□□□ 0.76
C11orf88-201ENST00000332814 WRNIP1Q96S55 665 aa19.81■□□□□ 0.76
C11orf88-201ENST00000332814 OSBPL5Q9H0X9 879 aaPredicted RBP19.81■□□□□ 0.76
C11orf88-201ENST00000332814 THSD7BQ9C0I4 1608 aa19.8■□□□□ 0.76
C11orf88-201ENST00000332814 MAP3K9P80192 1104 aa19.8■□□□□ 0.76
C11orf88-201ENST00000332814 ZFPM1Q8IX07 1006 aa19.8■□□□□ 0.76
C11orf88-201ENST00000332814 FAM155AB1AL88 458 aaPredicted RBP19.79■□□□□ 0.76
C11orf88-201ENST00000332814 HSPA1AP0DMV8 641 aaKnown RBP19.79■□□□□ 0.76
C11orf88-201ENST00000332814 HSPA1BP0DMV9 641 aaKnown RBP19.79■□□□□ 0.76
C11orf88-201ENST00000332814 ADD2P35612 726 aa19.79■□□□□ 0.76
C11orf88-201ENST00000332814 NUCB1Q02818 461 aa19.79■□□□□ 0.76
C11orf88-201ENST00000332814 MAPKAPK5Q8IW41 473 aa19.79■□□□□ 0.76
C11orf88-201ENST00000332814 KBTBD3Q8NAB2 608 aa19.79■□□□□ 0.76
C11orf88-201ENST00000332814 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.79■□□□□ 0.76
C11orf88-201ENST00000332814 FLT1P17948 1338 aa19.78■□□□□ 0.76
C11orf88-201ENST00000332814 DDTLA6NHG4 134 aaPredicted RBP19.78■□□□□ 0.76
C11orf88-201ENST00000332814 KIF23Q02241 960 aaPredicted RBP19.78■□□□□ 0.76
C11orf88-201ENST00000332814 MKRN3Q13064 507 aaKnown RBP19.78■□□□□ 0.76
C11orf88-201ENST00000332814 UBE3CQ15386 1083 aa19.78■□□□□ 0.76
C11orf88-201ENST00000332814 PI4K2BQ8TCG2 481 aa19.78■□□□□ 0.76
C11orf88-201ENST00000332814 CLMNQ96JQ2 1002 aa19.78■□□□□ 0.76
C11orf88-201ENST00000332814 FSD1Q9BTV5 496 aa19.78■□□□□ 0.76
C11orf88-201ENST00000332814 TRIM34Q9BYJ4 488 aa19.78■□□□□ 0.76
C11orf88-201ENST00000332814 CRNKL1Q9BZJ0 848 aaKnown RBP19.78■□□□□ 0.76
C11orf88-201ENST00000332814 DHX36Q9H2U1 1008 aaKnown RBP19.78■□□□□ 0.76
C11orf88-201ENST00000332814 ELP3Q9H9T3 547 aa19.78■□□□□ 0.76
C11orf88-201ENST00000332814 ATRNL1Q5VV63 1379 aa19.78■□□□□ 0.76
C11orf88-201ENST00000332814 COL2A1P02458 1487 aaPredicted RBP19.78■□□□□ 0.76
C11orf88-201ENST00000332814 MYO5AQ9Y4I1 1855 aaKnown RBP19.77■□□□□ 0.76
C11orf88-201ENST00000332814 HLA-DOAP06340 250 aa19.77■□□□□ 0.76
C11orf88-201ENST00000332814 PDE1AP54750 535 aa19.77■□□□□ 0.76
C11orf88-201ENST00000332814 VGLL4Q14135 290 aa19.77■□□□□ 0.76
C11orf88-201ENST00000332814 REM2Q8IYK8 340 aaPredicted RBP19.77■□□□□ 0.76
C11orf88-201ENST00000332814 SALL3Q9BXA9 1300 aa19.76■□□□□ 0.75
C11orf88-201ENST00000332814 TCRBV5S4A2TA0A5A2 114 aa19.76■□□□□ 0.75
C11orf88-201ENST00000332814 ZFYP08048 801 aaPredicted RBP19.76■□□□□ 0.75
C11orf88-201ENST00000332814 SPRYD7Q5W111 196 aa19.76■□□□□ 0.75
C11orf88-201ENST00000332814 SH3BP5LQ7L8J4 393 aa19.76■□□□□ 0.75
C11orf88-201ENST00000332814 CRACR2BQ8N4Y2 399 aaPredicted RBP19.76■□□□□ 0.75
C11orf88-201ENST00000332814 WNK4Q96J92 1243 aa19.76■□□□□ 0.75
C11orf88-201ENST00000332814 RIOK1Q9BRS2 568 aaKnown RBP19.76■□□□□ 0.75
C11orf88-201ENST00000332814 AK9Q5TCS8 1911 aa19.75■□□□□ 0.75
C11orf88-201ENST00000332814 MBD4O95243 580 aa19.75■□□□□ 0.75
C11orf88-201ENST00000332814 ZBTB48P10074 688 aaPredicted RBP19.75■□□□□ 0.75
C11orf88-201ENST00000332814 SREBF2Q12772 1141 aa19.75■□□□□ 0.75
C11orf88-201ENST00000332814 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.75■□□□□ 0.75
C11orf88-201ENST00000332814 DDRGK1Q96HY6 314 aa19.75■□□□□ 0.75
C11orf88-201ENST00000332814 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.75■□□□□ 0.75
C11orf88-201ENST00000332814 PI4KBQ9UBF8 816 aa19.75■□□□□ 0.75
C11orf88-201ENST00000332814 STAP2Q9UGK3 403 aa19.75■□□□□ 0.75
C11orf88-201ENST00000332814 SAP30BPQ9UHR5 308 aaKnown RBP19.75■□□□□ 0.75
C11orf88-201ENST00000332814 RNF113AO15541 343 aaKnown RBP19.74■□□□□ 0.75
C11orf88-201ENST00000332814 LCORLQ8N3X6 602 aa19.74■□□□□ 0.75
C11orf88-201ENST00000332814 ZKSCAN4Q969J2 545 aaPredicted RBP19.74■□□□□ 0.75
C11orf88-201ENST00000332814 OPTNQ96CV9 577 aa19.74■□□□□ 0.75
C11orf88-201ENST00000332814 ZIC5Q96T25 663 aa19.74■□□□□ 0.75
C11orf88-201ENST00000332814 ARMT1Q9H993 441 aa19.74■□□□□ 0.75
C11orf88-201ENST00000332814 WBP1LQ9NX94 342 aa19.74■□□□□ 0.75
C11orf88-201ENST00000332814 CA12O43570 354 aa19.73■□□□□ 0.75
C11orf88-201ENST00000332814 INPP5BP32019 993 aa19.73■□□□□ 0.75
C11orf88-201ENST00000332814 EVI5LQ96CN4 794 aa19.73■□□□□ 0.75
C11orf88-201ENST00000332814 OTUD5Q96G74 571 aa19.73■□□□□ 0.75
C11orf88-201ENST00000332814 HERC5Q9UII4 1024 aaKnown RBP19.73■□□□□ 0.75
C11orf88-201ENST00000332814 PALD1Q9ULE6 856 aa19.73■□□□□ 0.75
C11orf88-201ENST00000332814 OTOFQ9HC10 1997 aa19.73■□□□□ 0.75
C11orf88-201ENST00000332814 MANSC4A6NHS7 340 aaPredicted RBP19.72■□□□□ 0.75
C11orf88-201ENST00000332814 TRIM6-TRIM34B2RNG4 842 aa19.72■□□□□ 0.75
C11orf88-201ENST00000332814 TBC1D12O60347 775 aa19.72■□□□□ 0.75
C11orf88-201ENST00000332814 POLR3DP05423 398 aaPredicted RBP19.72■□□□□ 0.75
C11orf88-201ENST00000332814 SLC4A8Q2Y0W8 1093 aa19.72■□□□□ 0.75
C11orf88-201ENST00000332814 SLFNL1Q499Z3 407 aa19.72■□□□□ 0.75
C11orf88-201ENST00000332814 TTC6Q86TZ1 520 aa19.72■□□□□ 0.75
C11orf88-201ENST00000332814 ERO1BQ86YB8 467 aa19.72■□□□□ 0.75
C11orf88-201ENST00000332814 AMOTL1Q8IY63 956 aa19.72■□□□□ 0.75
C11orf88-201ENST00000332814 APPBP2Q92624 585 aa19.72■□□□□ 0.75
C11orf88-201ENST00000332814 PICK1Q9NRD5 415 aa19.72■□□□□ 0.75
C11orf88-201ENST00000332814 ZNF112Q9UJU3 913 aa19.72■□□□□ 0.75
C11orf88-201ENST00000332814 SNCAIPQ9Y6H5 919 aa19.72■□□□□ 0.75
C11orf88-201ENST00000332814 SPDYE5A6NIY4 337 aa19.71■□□□□ 0.75
C11orf88-201ENST00000332814 SCYL3Q8IZE3 742 aa19.71■□□□□ 0.75
C11orf88-201ENST00000332814 FAM196BA6NMK8 535 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms