RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 SLC26A6Q9BXS9 759 aa17.27■□□□□ 0.35
CLCNKA-201ENST00000331433 TRIM5Q9C035 493 aa17.27■□□□□ 0.35
CLCNKA-201ENST00000331433 GNL3LQ9NVN8 582 aaKnown RBP17.27■□□□□ 0.35
CLCNKA-201ENST00000331433 A0A1B0GUL6 1792 aa17.27■□□□□ 0.35
CLCNKA-201ENST00000331433 CNTNAP4Q9C0A0 1308 aa17.27■□□□□ 0.35
CLCNKA-201ENST00000331433 KLRK1P26718 216 aa17.26■□□□□ 0.35
CLCNKA-201ENST00000331433 IQCB1Q15051 598 aa17.26■□□□□ 0.35
CLCNKA-201ENST00000331433 FAM182BQ5T319 152 aa17.26■□□□□ 0.35
CLCNKA-201ENST00000331433 FBXW7Q969H0 707 aa17.26■□□□□ 0.35
CLCNKA-201ENST00000331433 MINDY4BA8MYZ0 360 aa17.26■□□□□ 0.35
CLCNKA-201ENST00000331433 MARCKSP29966 332 aaPredicted RBP17.26■□□□□ 0.35
CLCNKA-201ENST00000331433 PPARAQ07869 468 aa17.26■□□□□ 0.35
CLCNKA-201ENST00000331433 VPS72Q15906 364 aa17.26■□□□□ 0.35
CLCNKA-201ENST00000331433 SDF4Q9BRK5 362 aa17.26■□□□□ 0.35
CLCNKA-201ENST00000331433 MAGEB6P1A0A0J9YX57 407 aa17.25■□□□□ 0.35
CLCNKA-201ENST00000331433 CAVIN2O95810 425 aa17.25■□□□□ 0.35
CLCNKA-201ENST00000331433 ZNF75DP51815 510 aa17.25■□□□□ 0.35
CLCNKA-201ENST00000331433 GNL2Q13823 731 aaKnown RBP17.25■□□□□ 0.35
CLCNKA-201ENST00000331433 CAVIN4Q5BKX8 364 aa17.25■□□□□ 0.35
CLCNKA-201ENST00000331433 FAM84BQ96KN1 310 aaPredicted RBP17.25■□□□□ 0.35
CLCNKA-201ENST00000331433 PTGS1P23219 599 aa17.25■□□□□ 0.35
CLCNKA-201ENST00000331433 NOLC1Q14978 699 aaKnown RBP eCLIP17.25■□□□□ 0.35
CLCNKA-201ENST00000331433 WTAPQ15007 396 aa17.25■□□□□ 0.35
CLCNKA-201ENST00000331433 AXDND1Q5T1B0 1012 aaPredicted RBP17.25■□□□□ 0.35
CLCNKA-201ENST00000331433 PLA2G4DQ86XP0 818 aa17.25■□□□□ 0.35
CLCNKA-201ENST00000331433 ZNF831Q5JPB2 1677 aa17.25■□□□□ 0.35
CLCNKA-201ENST00000331433 GOLGA6L6A8MZA4 724 aa17.24■□□□□ 0.35
CLCNKA-201ENST00000331433 GNPATO15228 680 aa17.24■□□□□ 0.35
CLCNKA-201ENST00000331433 WDHD1O75717 1129 aaPredicted RBP17.24■□□□□ 0.35
CLCNKA-201ENST00000331433 GUCY1A2P33402 732 aa17.24■□□□□ 0.35
CLCNKA-201ENST00000331433 DYNLL1P63167 89 aaKnown RBP17.24■□□□□ 0.35
CLCNKA-201ENST00000331433 CCDC82Q8N4S0 544 aa17.24■□□□□ 0.35
CLCNKA-201ENST00000331433 PYCARDQ9ULZ3 195 aa17.24■□□□□ 0.35
CLCNKA-201ENST00000331433 MROH7-TTC4A0A0A0MT08 1334 aa17.24■□□□□ 0.35
CLCNKA-201ENST00000331433 SSRP1Q08945 709 aaKnown RBP17.24■□□□□ 0.35
CLCNKA-201ENST00000331433 TRIM29Q14134 588 aa17.24■□□□□ 0.35
CLCNKA-201ENST00000331433 SART3Q15020 963 aaKnown RBP17.24■□□□□ 0.35
CLCNKA-201ENST00000331433 AMIGO3Q86WK7 504 aa17.24■□□□□ 0.35
CLCNKA-201ENST00000331433 NBPF5PQ86XG9 351 aaPredicted RBP17.24■□□□□ 0.35
CLCNKA-201ENST00000331433 DRC7Q8IY82 874 aa17.24■□□□□ 0.35
CLCNKA-201ENST00000331433 CMTR1Q8N1G2 835 aaKnown RBP17.24■□□□□ 0.35
CLCNKA-201ENST00000331433 ZNF384Q8TF68 577 aa17.24■□□□□ 0.35
CLCNKA-201ENST00000331433 RIOK1Q9BRS2 568 aaKnown RBP17.24■□□□□ 0.35
CLCNKA-201ENST00000331433 NARFQ9UHQ1 456 aa17.24■□□□□ 0.35
CLCNKA-201ENST00000331433 CACNA1SQ13698 1873 aa17.23■□□□□ 0.35
CLCNKA-201ENST00000331433 SCN7AQ01118 1682 aa17.23■□□□□ 0.35
CLCNKA-201ENST00000331433 GOLGA6L19H0YKK7 550 aa17.23■□□□□ 0.35
CLCNKA-201ENST00000331433 TPM2P07951 284 aa17.23■□□□□ 0.35
CLCNKA-201ENST00000331433 SLC39A14Q15043 492 aa17.23■□□□□ 0.35
CLCNKA-201ENST00000331433 SLC10A5Q5PT55 438 aa17.23■□□□□ 0.35
CLCNKA-201ENST00000331433 CERKQ8TCT0 537 aa17.23■□□□□ 0.35
CLCNKA-201ENST00000331433 SETDB2Q96T68 719 aa17.23■□□□□ 0.35
CLCNKA-201ENST00000331433 NRBP1Q9UHY1 535 aa17.23■□□□□ 0.35
CLCNKA-201ENST00000331433 CYP2D7A0A087X1C5 515 aa17.23■□□□□ 0.35
CLCNKA-201ENST00000331433 FMNL1O95466 1100 aaPredicted RBP17.23■□□□□ 0.35
CLCNKA-201ENST00000331433 RTN1Q16799 776 aa17.23■□□□□ 0.35
CLCNKA-201ENST00000331433 RNF41Q9H4P4 317 aaPredicted RBP17.23■□□□□ 0.35
CLCNKA-201ENST00000331433 ANO10Q9NW15 660 aa17.23■□□□□ 0.35
CLCNKA-201ENST00000331433 ERICH2A1L162 156 aa17.22■□□□□ 0.35
CLCNKA-201ENST00000331433 PFKFB1P16118 471 aa17.22■□□□□ 0.35
CLCNKA-201ENST00000331433 IFNAR1P17181 557 aa17.22■□□□□ 0.35
CLCNKA-201ENST00000331433 RPS8P62241 208 aaKnown RBP17.22■□□□□ 0.35
CLCNKA-201ENST00000331433 DNTTIP2Q5QJE6 756 aaKnown RBP17.22■□□□□ 0.35
CLCNKA-201ENST00000331433 CCDC186Q7Z3E2 898 aa17.22■□□□□ 0.35
CLCNKA-201ENST00000331433 RGS22Q8NE09 1264 aa17.22■□□□□ 0.35
CLCNKA-201ENST00000331433 NUP133Q8WUM0 1156 aa17.22■□□□□ 0.35
CLCNKA-201ENST00000331433 BAZ2AQ9UIF9 1905 aaKnown RBP17.22■□□□□ 0.35
CLCNKA-201ENST00000331433 ZPR1O75312 459 aa17.22■□□□□ 0.35
CLCNKA-201ENST00000331433 RPS6KA4O75676 772 aa17.22■□□□□ 0.35
CLCNKA-201ENST00000331433 ZNF202O95125 648 aa17.22■□□□□ 0.35
CLCNKA-201ENST00000331433 U2AF2P26368 475 aaKnown RBP eCLIP17.22■□□□□ 0.35
CLCNKA-201ENST00000331433 DHX40Q8IX18 779 aaKnown RBP17.22■□□□□ 0.35
CLCNKA-201ENST00000331433 NLRP3Q96P20 1036 aa17.22■□□□□ 0.35
CLCNKA-201ENST00000331433 UBAC1Q9BSL1 405 aa17.22■□□□□ 0.35
CLCNKA-201ENST00000331433 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.22■□□□□ 0.35
CLCNKA-201ENST00000331433 TFCP2L1Q9NZI6 479 aa17.22■□□□□ 0.35
CLCNKA-201ENST00000331433 STK36Q9NRP7 1315 aa17.22■□□□□ 0.35
CLCNKA-201ENST00000331433 BECN2A8MW95 431 aa17.21■□□□□ 0.35
CLCNKA-201ENST00000331433 TPM3P06753 285 aa17.21■□□□□ 0.35
CLCNKA-201ENST00000331433 BTAF1O14981 1849 aa17.21■□□□□ 0.35
CLCNKA-201ENST00000331433 NID2Q14112 1375 aa17.21■□□□□ 0.34
CLCNKA-201ENST00000331433 CMA1P23946 247 aa17.21■□□□□ 0.34
CLCNKA-201ENST00000331433 PTPAQ15257 358 aa17.21■□□□□ 0.34
CLCNKA-201ENST00000331433 FBXO33Q7Z6M2 555 aa17.21■□□□□ 0.34
CLCNKA-201ENST00000331433 ZNF654Q8IZM8 581 aa17.21■□□□□ 0.34
CLCNKA-201ENST00000331433 KIAA1524Q8TCG1 905 aa17.21■□□□□ 0.34
CLCNKA-201ENST00000331433 MAP3K14Q99558 947 aa17.21■□□□□ 0.34
CLCNKA-201ENST00000331433 NYXQ9GZU5 481 aa17.21■□□□□ 0.34
CLCNKA-201ENST00000331433 KIAA1468Q9P260 1216 aa17.21■□□□□ 0.34
CLCNKA-201ENST00000331433 CCNL1Q9UK58 526 aaPredicted RBP17.21■□□□□ 0.34
CLCNKA-201ENST00000331433 KCNJ14Q9UNX9 436 aa17.21■□□□□ 0.34
CLCNKA-201ENST00000331433 TNKSO95271 1327 aa17.2■□□□□ 0.34
CLCNKA-201ENST00000331433 PRDM1O75626 825 aa17.2■□□□□ 0.34
CLCNKA-201ENST00000331433 RC3H1Q5TC82 1133 aaKnown RBP17.2■□□□□ 0.34
CLCNKA-201ENST00000331433 CEP57L1Q8IYX8 460 aa17.2■□□□□ 0.34
CLCNKA-201ENST00000331433 CLIP2Q9UDT6 1046 aa17.2■□□□□ 0.34
CLCNKA-201ENST00000331433 MYH2Q9UKX2 1941 aa17.2■□□□□ 0.34
CLCNKA-201ENST00000331433 BTBD18B2RXH4 712 aa17.2■□□□□ 0.34
CLCNKA-201ENST00000331433 TERF1P54274 439 aa17.2■□□□□ 0.34
CLCNKA-201ENST00000331433 LRMPQ12912 555 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms