RNA–Protein interactions for RNA: ENST00000328736.7

PTPN21-201, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-201ENST00000328736 OTUD7AQ8TE49 926 aaPredicted RBP17.26■□□□□ 0.35
PTPN21-201ENST00000328736 SNX21Q969T3 373 aa17.26■□□□□ 0.35
PTPN21-201ENST00000328736 DCAF5Q96JK2 942 aa17.26■□□□□ 0.35
PTPN21-201ENST00000328736 NOC4LQ9BVI4 516 aaKnown RBP17.26■□□□□ 0.35
PTPN21-201ENST00000328736 IVNS1ABPQ9Y6Y0 642 aa17.26■□□□□ 0.35
PTPN21-201ENST00000328736 KRT9P35527 623 aa17.26■□□□□ 0.35
PTPN21-201ENST00000328736 UAP1Q16222 522 aaPredicted RBP17.26■□□□□ 0.35
PTPN21-201ENST00000328736 LETM2Q2VYF4 491 aa17.26■□□□□ 0.35
PTPN21-201ENST00000328736 SWAP70Q9UH65 585 aa17.25■□□□□ 0.35
PTPN21-201ENST00000328736 SOS1Q07889 1333 aaPredicted RBP17.25■□□□□ 0.35
PTPN21-201ENST00000328736 NOP56O00567 594 aaKnown RBP17.25■□□□□ 0.35
PTPN21-201ENST00000328736 LZTFL1Q9NQ48 299 aa17.25■□□□□ 0.35
PTPN21-201ENST00000328736 PKD2L1Q9P0L9 805 aa17.25■□□□□ 0.35
PTPN21-201ENST00000328736 A0A1W2PP64 1363 aa17.25■□□□□ 0.35
PTPN21-201ENST00000328736 AKR1B15C9JRZ8 316 aaPredicted RBP17.25■□□□□ 0.35
PTPN21-201ENST00000328736 ITIH3Q06033 890 aa17.25■□□□□ 0.35
PTPN21-201ENST00000328736 STMN2Q93045 179 aa17.25■□□□□ 0.35
PTPN21-201ENST00000328736 CTNND2Q9UQB3 1225 aa17.25■□□□□ 0.35
PTPN21-201ENST00000328736 ASXL2Q76L83 1435 aa17.25■□□□□ 0.35
PTPN21-201ENST00000328736 GIPC1O14908 333 aa17.25■□□□□ 0.35
PTPN21-201ENST00000328736 CAPN2P17655 700 aa17.25■□□□□ 0.35
PTPN21-201ENST00000328736 UBL4BQ8N7F7 174 aa17.25■□□□□ 0.35
PTPN21-201ENST00000328736 PROCA1Q8NCQ7 364 aaPredicted RBP17.25■□□□□ 0.35
PTPN21-201ENST00000328736 NSMCE1Q8WV22 266 aa17.25■□□□□ 0.35
PTPN21-201ENST00000328736 TRIM6Q9C030 488 aaPredicted RBP17.25■□□□□ 0.35
PTPN21-201ENST00000328736 RFX1P22670 979 aa17.25■□□□□ 0.35
PTPN21-201ENST00000328736 LACTBP83111 547 aaPredicted RBP17.25■□□□□ 0.35
PTPN21-201ENST00000328736 SEPT6Q14141 434 aa17.25■□□□□ 0.35
PTPN21-201ENST00000328736 PLEKHM2Q8IWE5 1019 aa17.25■□□□□ 0.35
PTPN21-201ENST00000328736 NUP153P49790 1475 aaKnown RBP17.24■□□□□ 0.35
PTPN21-201ENST00000328736 CCDC125Q86Z20 511 aa17.24■□□□□ 0.35
PTPN21-201ENST00000328736 SAP30BPQ9UHR5 308 aaKnown RBP17.24■□□□□ 0.35
PTPN21-201ENST00000328736 ASIC2Q16515 512 aa17.24■□□□□ 0.35
PTPN21-201ENST00000328736 EYA1Q99502 592 aa17.24■□□□□ 0.35
PTPN21-201ENST00000328736 GPCPD1Q9NPB8 672 aa17.24■□□□□ 0.35
PTPN21-201ENST00000328736 STK32BQ9NY57 414 aa17.24■□□□□ 0.35
PTPN21-201ENST00000328736 IFNKQ9P0W0 207 aa17.24■□□□□ 0.35
PTPN21-201ENST00000328736 FLT4P35916 1363 aa17.24■□□□□ 0.35
PTPN21-201ENST00000328736 VWA3AA6NCI4 1184 aa17.24■□□□□ 0.35
PTPN21-201ENST00000328736 CCDC122Q5T0U0 273 aa17.24■□□□□ 0.35
PTPN21-201ENST00000328736 CNBD1Q8NA66 436 aa17.24■□□□□ 0.35
PTPN21-201ENST00000328736 FAM76AQ8TAV0 307 aa17.24■□□□□ 0.35
PTPN21-201ENST00000328736 A2MP01023 1474 aa17.24■□□□□ 0.35
PTPN21-201ENST00000328736 ACTN4O43707 911 aaKnown RBP17.24■□□□□ 0.35
PTPN21-201ENST00000328736 MBD4O95243 580 aa17.24■□□□□ 0.35
PTPN21-201ENST00000328736 SRGAP1Q7Z6B7 1085 aa17.24■□□□□ 0.35
PTPN21-201ENST00000328736 CTTNBP2Q8WZ74 1663 aa17.23■□□□□ 0.35
PTPN21-201ENST00000328736 UHRF1BP1LA0JNW5 1464 aa17.23■□□□□ 0.35
PTPN21-201ENST00000328736 DEXIO95424 95 aa17.23■□□□□ 0.35
PTPN21-201ENST00000328736 KMT5BQ4FZB7 885 aa17.23■□□□□ 0.35
PTPN21-201ENST00000328736 MICALL1Q8N3F8 863 aa17.23■□□□□ 0.35
PTPN21-201ENST00000328736 PARP10Q53GL7 1025 aa17.23■□□□□ 0.35
PTPN21-201ENST00000328736 VPS18Q9P253 973 aa17.23■□□□□ 0.35
PTPN21-201ENST00000328736 UFL1O94874 794 aa17.23■□□□□ 0.35
PTPN21-201ENST00000328736 GABPAQ06546 454 aa17.23■□□□□ 0.35
PTPN21-201ENST00000328736 PDE4DQ08499 809 aa17.23■□□□□ 0.35
PTPN21-201ENST00000328736 ZNF174Q15697 407 aa17.23■□□□□ 0.35
PTPN21-201ENST00000328736 CDCA7Q9BWT1 371 aaPredicted RBP17.23■□□□□ 0.35
PTPN21-201ENST00000328736 CACYBPQ9HB71 228 aaKnown RBP17.23■□□□□ 0.35
PTPN21-201ENST00000328736 ARHGEF35A5YM69 484 aa17.23■□□□□ 0.35
PTPN21-201ENST00000328736 M0QZ92 97 aa17.23■□□□□ 0.35
PTPN21-201ENST00000328736 BIRC2Q13490 618 aa17.23■□□□□ 0.35
PTPN21-201ENST00000328736 MAP7Q14244 749 aa17.23■□□□□ 0.35
PTPN21-201ENST00000328736 RILPL1Q5EBL4 403 aa17.23■□□□□ 0.35
PTPN21-201ENST00000328736 KLHDC4Q8TBB5 520 aa17.23■□□□□ 0.35
PTPN21-201ENST00000328736 TMEM87BQ96K49 555 aa17.23■□□□□ 0.35
PTPN21-201ENST00000328736 CHMP2AO43633 222 aa17.22■□□□□ 0.35
PTPN21-201ENST00000328736 ZEB2O60315 1214 aa17.22■□□□□ 0.35
PTPN21-201ENST00000328736 ZBED4O75132 1171 aa17.22■□□□□ 0.35
PTPN21-201ENST00000328736 MYL5Q02045 173 aa17.22■□□□□ 0.35
PTPN21-201ENST00000328736 TAOK1Q7L7X3 1001 aa17.22■□□□□ 0.35
PTPN21-201ENST00000328736 HDXQ7Z353 690 aa17.22■□□□□ 0.35
PTPN21-201ENST00000328736 UTP11Q9Y3A2 253 aaKnown RBP17.22■□□□□ 0.35
PTPN21-201ENST00000328736 GNPATO15228 680 aa17.22■□□□□ 0.35
PTPN21-201ENST00000328736 RHOXF2BP0C7M4 288 aa17.22■□□□□ 0.35
PTPN21-201ENST00000328736 TUBB2AQ13885 445 aa17.22■□□□□ 0.35
PTPN21-201ENST00000328736 ZNF365Q70YC5 407 aa17.22■□□□□ 0.35
PTPN21-201ENST00000328736 RHOXF2Q9BQY4 288 aa17.22■□□□□ 0.35
PTPN21-201ENST00000328736 TUBB2BQ9BVA1 445 aa17.22■□□□□ 0.35
PTPN21-201ENST00000328736 CCNT1O60563 726 aaKnown RBP17.22■□□□□ 0.35
PTPN21-201ENST00000328736 NACA2Q9H009 215 aa17.22■□□□□ 0.35
PTPN21-201ENST00000328736 SUPT20HQ8NEM7 779 aa17.21■□□□□ 0.35
PTPN21-201ENST00000328736 ZHX1Q9UKY1 873 aaPredicted RBP17.21■□□□□ 0.35
PTPN21-201ENST00000328736 TEX14Q8IWB6 1497 aa17.21■□□□□ 0.35
PTPN21-201ENST00000328736 CNGA1P29973 690 aa17.21■□□□□ 0.35
PTPN21-201ENST00000328736 HIBADHP31937 336 aaKnown RBP17.21■□□□□ 0.35
PTPN21-201ENST00000328736 HSPA1LP34931 641 aa17.21■□□□□ 0.35
PTPN21-201ENST00000328736 EIF6P56537 245 aaKnown RBP17.21■□□□□ 0.35
PTPN21-201ENST00000328736 BAG1Q99933 345 aaPredicted RBP17.21■□□□□ 0.35
PTPN21-201ENST00000328736 AZI2Q9H6S1 392 aa17.21■□□□□ 0.35
PTPN21-201ENST00000328736 TACC3Q9Y6A5 838 aa17.21■□□□□ 0.35
PTPN21-201ENST00000328736 DNM2P50570 870 aa17.21■□□□□ 0.35
PTPN21-201ENST00000328736 TESK2Q96S53 571 aa17.21■□□□□ 0.35
PTPN21-201ENST00000328736 PODXL2Q9NZ53 605 aa17.21■□□□□ 0.35
PTPN21-201ENST00000328736 GGA1Q9UJY5 639 aa17.21■□□□□ 0.35
PTPN21-201ENST00000328736 GTF2A1P52655 376 aaPredicted RBP17.21■□□□□ 0.35
PTPN21-201ENST00000328736 CUL4BQ13620 913 aa17.21■□□□□ 0.35
PTPN21-201ENST00000328736 CCDC94Q9BW85 323 aaPredicted RBP17.21■□□□□ 0.35
PTPN21-201ENST00000328736 ZBTB40Q9NUA8 1239 aa17.21■□□□□ 0.35
PTPN21-201ENST00000328736 CROCCP2Q86T23 111 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms