RNA–Protein interactions for RNA: ENST00000326335.8

CUL4A-201, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 3,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-201ENST00000326335 ARHGEF1Q92888 912 aaKnown RBP12.34□□□□□ -0.43
CUL4A-201ENST00000326335 EEF2KMTQ96G04 330 aa12.34□□□□□ -0.43
CUL4A-201ENST00000326335 ERVV-1B6SEH8 477 aa12.34□□□□□ -0.43
CUL4A-201ENST00000326335 C6orf229H3BNL8 230 aa12.34□□□□□ -0.43
CUL4A-201ENST00000326335 SH2B2O14492 632 aaPredicted RBP12.34□□□□□ -0.43
CUL4A-201ENST00000326335 USP5P45974 858 aa12.34□□□□□ -0.43
CUL4A-201ENST00000326335 PPARAQ07869 468 aa12.34□□□□□ -0.43
CUL4A-201ENST00000326335 NOLC1Q14978 699 aaKnown RBP eCLIP12.34□□□□□ -0.43
CUL4A-201ENST00000326335 DIS3L2Q8IYB7 885 aaKnown RBP12.34□□□□□ -0.43
CUL4A-201ENST00000326335 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.34□□□□□ -0.43
CUL4A-201ENST00000326335 V9GYY5 206 aaPredicted RBP12.34□□□□□ -0.43
CUL4A-201ENST00000326335 TNKSO95271 1327 aa12.34□□□□□ -0.43
CUL4A-201ENST00000326335 PLEKHA8P1O95397 391 aa12.34□□□□□ -0.43
CUL4A-201ENST00000326335 GOLGA8HP0CJ92 632 aa12.34□□□□□ -0.43
CUL4A-201ENST00000326335 ANO1Q5XXA6 986 aa12.34□□□□□ -0.43
CUL4A-201ENST00000326335 HOMER1Q86YM7 354 aa12.34□□□□□ -0.43
CUL4A-201ENST00000326335 TUBGCP6Q96RT7 1819 aa12.33□□□□□ -0.43
CUL4A-201ENST00000326335 TRIM37O94972 964 aa12.33□□□□□ -0.44
CUL4A-201ENST00000326335 LY9Q9HBG7 655 aa12.33□□□□□ -0.44
CUL4A-201ENST00000326335 CDHR2Q9BYE9 1310 aa12.33□□□□□ -0.44
CUL4A-201ENST00000326335 ABCC12Q96J65 1359 aa12.33□□□□□ -0.44
CUL4A-201ENST00000326335 TSPY2A6NKD2 308 aa12.33□□□□□ -0.44
CUL4A-201ENST00000326335 SLC3A2P08195 630 aaKnown RBP12.33□□□□□ -0.44
CUL4A-201ENST00000326335 VEGFAP15692 232 aaPredicted RBP12.33□□□□□ -0.44
CUL4A-201ENST00000326335 KIF23Q02241 960 aaPredicted RBP12.33□□□□□ -0.44
CUL4A-201ENST00000326335 PICALMQ13492 652 aa12.33□□□□□ -0.44
CUL4A-201ENST00000326335 HSP90AA2PQ14568 343 aaPredicted RBP12.33□□□□□ -0.44
CUL4A-201ENST00000326335 UBE3CQ15386 1083 aa12.33□□□□□ -0.44
CUL4A-201ENST00000326335 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.33□□□□□ -0.44
CUL4A-201ENST00000326335 USP49Q70CQ1 688 aa12.33□□□□□ -0.44
CUL4A-201ENST00000326335 TRMT44Q8IYL2 757 aaKnown RBP12.33□□□□□ -0.44
CUL4A-201ENST00000326335 TRIM22Q8IYM9 498 aa12.33□□□□□ -0.44
CUL4A-201ENST00000326335 RASSF8Q8NHQ8 419 aa12.33□□□□□ -0.44
CUL4A-201ENST00000326335 FAM84BQ96KN1 310 aaPredicted RBP12.33□□□□□ -0.44
CUL4A-201ENST00000326335 PLA2G12BQ9BX93 195 aa12.33□□□□□ -0.44
CUL4A-201ENST00000326335 ZNF202O95125 648 aa12.33□□□□□ -0.44
CUL4A-201ENST00000326335 PFKFB1P16118 471 aa12.33□□□□□ -0.44
CUL4A-201ENST00000326335 SAFBQ15424 915 aaKnown RBP eCLIP12.33□□□□□ -0.44
CUL4A-201ENST00000326335 GRIK5Q16478 980 aa12.33□□□□□ -0.44
CUL4A-201ENST00000326335 MAPKAPK5Q8IW41 473 aa12.33□□□□□ -0.44
CUL4A-201ENST00000326335 RASGRP4Q8TDF6 673 aa12.33□□□□□ -0.44
CUL4A-201ENST00000326335 SPATA31A5Q5VU36 1347 aa12.32□□□□□ -0.44
CUL4A-201ENST00000326335 SPATA31A7Q8IWB4 1347 aa12.32□□□□□ -0.44
CUL4A-201ENST00000326335 TNS2Q63HR2 1409 aa12.32□□□□□ -0.44
CUL4A-201ENST00000326335 TCRBV5S4A2TA0A5A2 114 aa12.32□□□□□ -0.44
CUL4A-201ENST00000326335 DHX8Q14562 1220 aaKnown RBP12.32□□□□□ -0.44
CUL4A-201ENST00000326335 CCDC144BQ3MJ40 725 aa12.32□□□□□ -0.44
CUL4A-201ENST00000326335 IFIT1BQ5T764 474 aaKnown RBP12.32□□□□□ -0.44
CUL4A-201ENST00000326335 LINC00301Q8NCQ3 95 aa12.32□□□□□ -0.44
CUL4A-201ENST00000326335 IL17RAQ96F46 866 aa12.32□□□□□ -0.44
CUL4A-201ENST00000326335 FUCA2Q9BTY2 467 aa12.32□□□□□ -0.44
CUL4A-201ENST00000326335 KCNF1Q9H3M0 494 aa12.32□□□□□ -0.44
CUL4A-201ENST00000326335 HIBADHP31937 336 aaKnown RBP12.32□□□□□ -0.44
CUL4A-201ENST00000326335 SYKP43405 635 aa12.32□□□□□ -0.44
CUL4A-201ENST00000326335 STX17P56962 302 aa12.32□□□□□ -0.44
CUL4A-201ENST00000326335 MECOMQ03112 1051 aa12.32□□□□□ -0.44
CUL4A-201ENST00000326335 FAM160A1Q05DH4 1040 aa12.32□□□□□ -0.44
CUL4A-201ENST00000326335 ZNF174Q15697 407 aa12.32□□□□□ -0.44
CUL4A-201ENST00000326335 PARP10Q53GL7 1025 aa12.32□□□□□ -0.44
CUL4A-201ENST00000326335 GPIHBP1Q8IV16 184 aa12.32□□□□□ -0.44
CUL4A-201ENST00000326335 LLPHQ9BRT6 129 aaKnown RBP12.32□□□□□ -0.44
CUL4A-201ENST00000326335 FGFR2P21802 821 aa12.32□□□□□ -0.44
CUL4A-201ENST00000326335 TPTE2Q6XPS3 522 aa12.32□□□□□ -0.44
CUL4A-201ENST00000326335 ZNF654Q8IZM8 581 aa12.32□□□□□ -0.44
CUL4A-201ENST00000326335 IGDCC4Q8TDY8 1250 aa12.32□□□□□ -0.44
CUL4A-201ENST00000326335 MYO5AQ9Y4I1 1855 aaKnown RBP12.31□□□□□ -0.44
CUL4A-201ENST00000326335 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.31□□□□□ -0.44
CUL4A-201ENST00000326335 GPKOWQ92917 476 aaPredicted RBP eCLIP12.31□□□□□ -0.44
CUL4A-201ENST00000326335 MAPK8IP1Q9UQF2 711 aa12.31□□□□□ -0.44
CUL4A-201ENST00000326335 OFD1O75665 1012 aa12.31□□□□□ -0.44
CUL4A-201ENST00000326335 ATP1A3P13637 1013 aa12.31□□□□□ -0.44
CUL4A-201ENST00000326335 ARID4AP29374 1257 aaPredicted RBP12.31□□□□□ -0.44
CUL4A-201ENST00000326335 RCOR1Q9UKL0 485 aa12.31□□□□□ -0.44
CUL4A-201ENST00000326335 PCDHB6Q9Y5E3 794 aa12.31□□□□□ -0.44
CUL4A-201ENST00000326335 MROH7-TTC4A0A0A0MT08 1334 aa12.31□□□□□ -0.44
CUL4A-201ENST00000326335 XIRP1Q702N8 1843 aaKnown RBP12.31□□□□□ -0.44
CUL4A-201ENST00000326335 PES1O00541 588 aaKnown RBP12.31□□□□□ -0.44
CUL4A-201ENST00000326335 TPD52L1Q16890 204 aaPredicted RBP12.31□□□□□ -0.44
CUL4A-201ENST00000326335 CNNM3Q8NE01 707 aa12.31□□□□□ -0.44
CUL4A-201ENST00000326335 TGFBRAP1Q8WUH2 860 aa12.31□□□□□ -0.44
CUL4A-201ENST00000326335 MXD3Q9BW11 206 aa12.31□□□□□ -0.44
CUL4A-201ENST00000326335 SNW1Q13573 536 aaKnown RBP12.3□□□□□ -0.44
CUL4A-201ENST00000326335 CLEC10AQ8IUN9 316 aa12.3□□□□□ -0.44
CUL4A-201ENST00000326335 MKNK2Q9HBH9 465 aa12.3□□□□□ -0.44
CUL4A-201ENST00000326335 IFNKQ9P0W0 207 aa12.3□□□□□ -0.44
CUL4A-201ENST00000326335 STRCQ7RTU9 1775 aa12.3□□□□□ -0.44
CUL4A-201ENST00000326335 GOLGA6L6A8MZA4 724 aa12.3□□□□□ -0.44
CUL4A-201ENST00000326335 TMC6Q7Z403 805 aa12.3□□□□□ -0.44
CUL4A-201ENST00000326335 SMYD4Q8IYR2 804 aaPredicted RBP12.3□□□□□ -0.44
CUL4A-201ENST00000326335 CEP57L1Q8IYX8 460 aa12.3□□□□□ -0.44
CUL4A-201ENST00000326335 SMARCC1Q92922 1105 aaPredicted RBP12.3□□□□□ -0.44
CUL4A-201ENST00000326335 DHX58Q96C10 678 aa12.3□□□□□ -0.44
CUL4A-201ENST00000326335 BCL2L12Q9HB09 334 aa12.3□□□□□ -0.44
CUL4A-201ENST00000326335 ZMYM6O95789 1325 aa12.3□□□□□ -0.44
CUL4A-201ENST00000326335 USP17L3A6NCW0 530 aa12.29□□□□□ -0.44
CUL4A-201ENST00000326335 USP17L4A6NCW7 530 aa12.29□□□□□ -0.44
CUL4A-201ENST00000326335 POLR2DO15514 142 aaKnown RBP12.29□□□□□ -0.44
CUL4A-201ENST00000326335 STX1AQ16623 288 aa12.29□□□□□ -0.44
CUL4A-201ENST00000326335 TRAPPC3LQ5T215 181 aa12.29□□□□□ -0.44
CUL4A-201ENST00000326335 USP17L1Q7RTZ2 530 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms