RNA–Protein interactions for RNA: ENST00000324727.8

SCN4B-201, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4B, Length 4,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-201ENST00000324727 RXRBP28702 533 aa13.18□□□□□ -0.3
SCN4B-201ENST00000324727 SPECC1LQ69YQ0 1117 aa13.18□□□□□ -0.3
SCN4B-201ENST00000324727 GIGYF2Q6Y7W6 1299 aaKnown RBP13.18□□□□□ -0.3
SCN4B-201ENST00000324727 CCDC121Q6ZUS5 278 aa13.18□□□□□ -0.3
SCN4B-201ENST00000324727 RUFY3Q7L099 469 aa13.18□□□□□ -0.3
SCN4B-201ENST00000324727 CMTR1Q8N1G2 835 aaKnown RBP13.18□□□□□ -0.3
SCN4B-201ENST00000324727 ZBTB38Q8NAP3 1195 aaPredicted RBP13.18□□□□□ -0.3
SCN4B-201ENST00000324727 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.18□□□□□ -0.3
SCN4B-201ENST00000324727 CALM1P0DP23 149 aa13.17□□□□□ -0.3
SCN4B-201ENST00000324727 CALM2P0DP24 149 aa13.17□□□□□ -0.3
SCN4B-201ENST00000324727 CALM3P0DP25 149 aa13.17□□□□□ -0.3
SCN4B-201ENST00000324727 CPXCR1Q8N123 301 aa13.17□□□□□ -0.3
SCN4B-201ENST00000324727 PHKBQ93100 1093 aa13.17□□□□□ -0.3
SCN4B-201ENST00000324727 A2ML1A8K2U0 1454 aa13.17□□□□□ -0.3
SCN4B-201ENST00000324727 CDC42BPAQ5VT25 1732 aa13.17□□□□□ -0.3
SCN4B-201ENST00000324727 A0A0D9SFI3 127 aa13.17□□□□□ -0.3
SCN4B-201ENST00000324727 USP17L12C9JPN9 530 aa13.17□□□□□ -0.3
SCN4B-201ENST00000324727 USP17L21D6R901 530 aa13.17□□□□□ -0.3
SCN4B-201ENST00000324727 OPA1O60313 960 aa13.17□□□□□ -0.3
SCN4B-201ENST00000324727 SYKP43405 635 aa13.17□□□□□ -0.3
SCN4B-201ENST00000324727 CCDC102BQ68D86 513 aa13.17□□□□□ -0.3
SCN4B-201ENST00000324727 UNC5CLQ8IV45 518 aa13.17□□□□□ -0.3
SCN4B-201ENST00000324727 RSRC1Q96IZ7 334 aaKnown RBP13.17□□□□□ -0.3
SCN4B-201ENST00000324727 ZSCAN16Q9H4T2 348 aaPredicted RBP13.17□□□□□ -0.3
SCN4B-201ENST00000324727 JADE2Q9NQC1 790 aa13.17□□□□□ -0.3
SCN4B-201ENST00000324727 TTF2Q9UNY4 1162 aaKnown RBP13.17□□□□□ -0.3
SCN4B-201ENST00000324727 V9GY48 417 aaPredicted RBP13.17□□□□□ -0.3
SCN4B-201ENST00000324727 FAM135BQ49AJ0 1406 aa13.17□□□□□ -0.3
SCN4B-201ENST00000324727 PREX2Q70Z35 1606 aa13.17□□□□□ -0.3
SCN4B-201ENST00000324727 USO1O60763 962 aaKnown RBP13.17□□□□□ -0.3
SCN4B-201ENST00000324727 GSPT1P15170 499 aaKnown RBP13.17□□□□□ -0.3
SCN4B-201ENST00000324727 SMC1AQ14683 1233 aaKnown RBP13.17□□□□□ -0.3
SCN4B-201ENST00000324727 TTC6Q86TZ1 520 aa13.17□□□□□ -0.3
SCN4B-201ENST00000324727 MAP3K15Q6ZN16 1313 aa13.17□□□□□ -0.3
SCN4B-201ENST00000324727 PLCG2P16885 1265 aa13.17□□□□□ -0.3
SCN4B-201ENST00000324727 MCM7P33993 719 aa13.17□□□□□ -0.3
SCN4B-201ENST00000324727 SMARCC2Q8TAQ2 1214 aa13.17□□□□□ -0.3
SCN4B-201ENST00000324727 FAM76AQ8TAV0 307 aa13.17□□□□□ -0.3
SCN4B-201ENST00000324727 CALML4Q96GE6 196 aa13.17□□□□□ -0.3
SCN4B-201ENST00000324727 SNX14Q9Y5W7 946 aa13.17□□□□□ -0.3
SCN4B-201ENST00000324727 ABCC4O15439 1325 aa13.17□□□□□ -0.3
SCN4B-201ENST00000324727 ADGRL3Q9HAR2 1447 aa13.16□□□□□ -0.3
SCN4B-201ENST00000324727 ERCC6LQ2NKX8 1250 aa13.16□□□□□ -0.3
SCN4B-201ENST00000324727 IFNKQ9P0W0 207 aa13.16□□□□□ -0.3
SCN4B-201ENST00000324727 GNAT2P19087 354 aa13.16□□□□□ -0.3
SCN4B-201ENST00000324727 GPR101Q96P66 508 aaPredicted RBP13.16□□□□□ -0.3
SCN4B-201ENST00000324727 NAA15Q9BXJ9 866 aaKnown RBP13.16□□□□□ -0.3
SCN4B-201ENST00000324727 MKRN1Q9UHC7 482 aaKnown RBP13.16□□□□□ -0.3
SCN4B-201ENST00000324727 CTAGE9A4FU28 777 aa13.16□□□□□ -0.3
SCN4B-201ENST00000324727 CHRNDQ07001 517 aa13.16□□□□□ -0.3
SCN4B-201ENST00000324727 DHX58Q96C10 678 aa13.16□□□□□ -0.3
SCN4B-201ENST00000324727 ZNF75DP51815 510 aa13.15□□□□□ -0.3
SCN4B-201ENST00000324727 CLNS1AP54105 237 aaKnown RBP13.15□□□□□ -0.3
SCN4B-201ENST00000324727 PTH1RQ03431 593 aa13.15□□□□□ -0.3
SCN4B-201ENST00000324727 KARSQ15046 597 aaKnown RBP13.15□□□□□ -0.3
SCN4B-201ENST00000324727 C2CD5Q86YS7 1000 aa13.15□□□□□ -0.3
SCN4B-201ENST00000324727 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.15□□□□□ -0.3
SCN4B-201ENST00000324727 CKAP4Q07065 602 aaKnown RBP13.15□□□□□ -0.3
SCN4B-201ENST00000324727 HLFQ16534 295 aa13.15□□□□□ -0.3
SCN4B-201ENST00000324727 CCDC178Q5BJE1 867 aa13.15□□□□□ -0.3
SCN4B-201ENST00000324727 POTEDQ86YR6 584 aa13.15□□□□□ -0.3
SCN4B-201ENST00000324727 EFCC1Q9HA90 598 aa13.15□□□□□ -0.3
SCN4B-201ENST00000324727 AATKQ6ZMQ8 1374 aa13.15□□□□□ -0.3
SCN4B-201ENST00000324727 GADD45BO75293 160 aaPredicted RBP13.15□□□□□ -0.3
SCN4B-201ENST00000324727 AFAP1L1Q8TED9 768 aa13.15□□□□□ -0.3
SCN4B-201ENST00000324727 RBM28Q9NW13 759 aaKnown RBP13.15□□□□□ -0.3
SCN4B-201ENST00000324727 MTIF2P46199 727 aaKnown RBP13.15□□□□□ -0.3
SCN4B-201ENST00000324727 WDR66Q8TBY9 1149 aa13.15□□□□□ -0.3
SCN4B-201ENST00000324727 DBNLQ9UJU6 430 aaKnown RBP13.15□□□□□ -0.3
SCN4B-201ENST00000324727 ANKRD62A6NC57 917 aa13.14□□□□□ -0.31
SCN4B-201ENST00000324727 TRIM75PA6NK02 468 aa13.14□□□□□ -0.31
SCN4B-201ENST00000324727 JAK2O60674 1132 aa13.14□□□□□ -0.31
SCN4B-201ENST00000324727 PCCAP05165 728 aaPredicted RBP13.14□□□□□ -0.31
SCN4B-201ENST00000324727 ERFEQ4G0M1 354 aa13.14□□□□□ -0.31
SCN4B-201ENST00000324727 CACNA2D4Q7Z3S7 1137 aa13.14□□□□□ -0.31
SCN4B-201ENST00000324727 PALD1Q9ULE6 856 aa13.14□□□□□ -0.31
SCN4B-201ENST00000324727 NDUFAB1O14561 156 aa13.14□□□□□ -0.31
SCN4B-201ENST00000324727 GNAQP50148 359 aa13.14□□□□□ -0.31
SCN4B-201ENST00000324727 STX17P56962 302 aa13.14□□□□□ -0.31
SCN4B-201ENST00000324727 GPR162Q16538 588 aa13.14□□□□□ -0.31
SCN4B-201ENST00000324727 HELLSQ9NRZ9 838 aa13.14□□□□□ -0.31
SCN4B-201ENST00000324727 ZNF174Q15697 407 aa13.14□□□□□ -0.31
SCN4B-201ENST00000324727 LZTFL1Q9NQ48 299 aa13.14□□□□□ -0.31
SCN4B-201ENST00000324727 SERPINB2P05120 415 aa13.13□□□□□ -0.31
SCN4B-201ENST00000324727 LETM2Q2VYF4 491 aa13.13□□□□□ -0.31
SCN4B-201ENST00000324727 B4GALNT4Q76KP1 1039 aa13.13□□□□□ -0.31
SCN4B-201ENST00000324727 CHAMP1Q96JM3 812 aa13.13□□□□□ -0.31
SCN4B-201ENST00000324727 TFAP4Q01664 338 aa13.13□□□□□ -0.31
SCN4B-201ENST00000324727 LRMPQ12912 555 aa13.13□□□□□ -0.31
SCN4B-201ENST00000324727 SYCP3Q8IZU3 236 aa13.13□□□□□ -0.31
SCN4B-201ENST00000324727 MRPS27Q92552 414 aaKnown RBP13.13□□□□□ -0.31
SCN4B-201ENST00000324727 CBX8Q9HC52 389 aa13.13□□□□□ -0.31
SCN4B-201ENST00000324727 AFF2P51816 1311 aa13.13□□□□□ -0.31
SCN4B-201ENST00000324727 SPDYE3A6NKU9 549 aa13.13□□□□□ -0.31
SCN4B-201ENST00000324727 SPTLC2O15270 562 aa13.13□□□□□ -0.31
SCN4B-201ENST00000324727 IL6STP40189 918 aaPredicted RBP13.13□□□□□ -0.31
SCN4B-201ENST00000324727 TDRD12Q587J7 1177 aaKnown RBP13.13□□□□□ -0.31
SCN4B-201ENST00000324727 HOMER2Q9NSB8 354 aa13.13□□□□□ -0.31
SCN4B-201ENST00000324727 IBTKQ9P2D0 1353 aaPredicted RBP13.13□□□□□ -0.31
SCN4B-201ENST00000324727 ATP5JP18859 108 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms