RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 SAMD1Q6SPF0 538 aaPredicted RBP7.9□□□□□ -1.15
SMC1A-201ENST00000322213 MCUR1Q96AQ8 359 aa7.9□□□□□ -1.15
SMC1A-201ENST00000322213 FAM184BQ9ULE4 1060 aa7.9□□□□□ -1.15
SMC1A-201ENST00000322213 RABGAP1Q9Y3P9 1069 aa7.9□□□□□ -1.15
SMC1A-201ENST00000322213 KIF13AQ9H1H9 1805 aa7.9□□□□□ -1.15
SMC1A-201ENST00000322213 A0A1B0GVL5 298 aa7.9□□□□□ -1.15
SMC1A-201ENST00000322213 RPS6KB1P23443 525 aa7.9□□□□□ -1.15
SMC1A-201ENST00000322213 RAB11FIP4Q86YS3 637 aa7.9□□□□□ -1.15
SMC1A-201ENST00000322213 ARMC2Q8NEN0 867 aa7.9□□□□□ -1.15
SMC1A-201ENST00000322213 TTC21AQ8NDW8 1320 aa7.9□□□□□ -1.15
SMC1A-201ENST00000322213 APBA1Q02410 837 aa7.9□□□□□ -1.15
SMC1A-201ENST00000322213 TDRD7Q8NHU6 1098 aaKnown RBP7.9□□□□□ -1.15
SMC1A-201ENST00000322213 PPP1R14CQ8TAE6 165 aa7.9□□□□□ -1.15
SMC1A-201ENST00000322213 BAIAP2L1Q9UHR4 511 aa7.9□□□□□ -1.15
SMC1A-201ENST00000322213 CTNND2Q9UQB3 1225 aa7.89□□□□□ -1.15
SMC1A-201ENST00000322213 PIK3R5Q8WYR1 880 aa7.89□□□□□ -1.15
SMC1A-201ENST00000322213 ACTR5Q9H9F9 607 aaPredicted RBP7.89□□□□□ -1.15
SMC1A-201ENST00000322213 NUP153P49790 1475 aaKnown RBP7.89□□□□□ -1.15
SMC1A-201ENST00000322213 RP1P56715 2156 aa7.89□□□□□ -1.15
SMC1A-201ENST00000322213 LONRF2Q1L5Z9 754 aa7.89□□□□□ -1.15
SMC1A-201ENST00000322213 MCMDC2Q4G0Z9 681 aa7.89□□□□□ -1.15
SMC1A-201ENST00000322213 NOS1P29475 1434 aa7.89□□□□□ -1.15
SMC1A-201ENST00000322213 PLB1Q6P1J6 1458 aa7.89□□□□□ -1.15
SMC1A-201ENST00000322213 GOLGA8AA7E2F4 631 aa7.89□□□□□ -1.15
SMC1A-201ENST00000322213 CETN3O15182 167 aa7.89□□□□□ -1.15
SMC1A-201ENST00000322213 AFMP43652 599 aa7.89□□□□□ -1.15
SMC1A-201ENST00000322213 F6X3S4 739 aa7.89□□□□□ -1.15
SMC1A-201ENST00000322213 ATP2A1O14983 1001 aa7.89□□□□□ -1.15
SMC1A-201ENST00000322213 TRIM58Q8NG06 486 aa7.89□□□□□ -1.15
SMC1A-201ENST00000322213 ALG1Q9BT22 464 aa7.89□□□□□ -1.15
SMC1A-201ENST00000322213 ABCA6Q8N139 1617 aa7.89□□□□□ -1.15
SMC1A-201ENST00000322213 PFDN1O60925 122 aa7.89□□□□□ -1.15
SMC1A-201ENST00000322213 CLTAP09496 248 aa7.89□□□□□ -1.15
SMC1A-201ENST00000322213 TMEM67Q5HYA8 995 aa7.89□□□□□ -1.15
SMC1A-201ENST00000322213 ZNF287Q9HBT7 754 aa7.89□□□□□ -1.15
SMC1A-201ENST00000322213 IRX4P78413 519 aa7.89□□□□□ -1.15
SMC1A-201ENST00000322213 TAF7Q15545 349 aaPredicted RBP7.89□□□□□ -1.15
SMC1A-201ENST00000322213 NUP58Q9BVL2 599 aa7.89□□□□□ -1.15
SMC1A-201ENST00000322213 ADAM21Q9UKJ8 722 aa7.89□□□□□ -1.15
SMC1A-201ENST00000322213 MIA3Q5JRA6 1907 aa7.89□□□□□ -1.15
SMC1A-201ENST00000322213 SHROOM3Q8TF72 1996 aa7.89□□□□□ -1.15
SMC1A-201ENST00000322213 NBPF14Q5TI25 921 aa7.88□□□□□ -1.15
SMC1A-201ENST00000322213 NAA16Q6N069 864 aaPredicted RBP7.88□□□□□ -1.15
SMC1A-201ENST00000322213 MEIS3Q99687 375 aa7.88□□□□□ -1.15
SMC1A-201ENST00000322213 WWC3Q9ULE0 1092 aa7.88□□□□□ -1.15
SMC1A-201ENST00000322213 MTX1Q13505 466 aa7.88□□□□□ -1.15
SMC1A-201ENST00000322213 CCDC110Q8TBZ0 833 aa7.88□□□□□ -1.15
SMC1A-201ENST00000322213 CLTCL1P53675 1640 aa7.88□□□□□ -1.15
SMC1A-201ENST00000322213 PPIP5K1Q6PFW1 1433 aa7.88□□□□□ -1.15
SMC1A-201ENST00000322213 SRGAP1Q7Z6B7 1085 aa7.88□□□□□ -1.15
SMC1A-201ENST00000322213 ZMAT2Q96NC0 199 aaKnown RBP7.88□□□□□ -1.15
SMC1A-201ENST00000322213 CENPKQ9BS16 269 aa7.88□□□□□ -1.15
SMC1A-201ENST00000322213 ARHGEF28Q8N1W1 1705 aaKnown RBP7.88□□□□□ -1.15
SMC1A-201ENST00000322213 ZNF518AQ6AHZ1 1483 aa7.88□□□□□ -1.15
SMC1A-201ENST00000322213 KMT5BQ4FZB7 885 aa7.88□□□□□ -1.15
SMC1A-201ENST00000322213 CCDC194A0A1B0GVG4 234 aa7.88□□□□□ -1.15
SMC1A-201ENST00000322213 NUTM2BA6NNL0 878 aaPredicted RBP7.88□□□□□ -1.15
SMC1A-201ENST00000322213 NUTM2EB1AL46 878 aaPredicted RBP7.88□□□□□ -1.15
SMC1A-201ENST00000322213 IFT88Q13099 833 aa7.88□□□□□ -1.15
SMC1A-201ENST00000322213 SRLQ86TD4 932 aa7.88□□□□□ -1.15
SMC1A-201ENST00000322213 THEGQ9P2T0 379 aa7.88□□□□□ -1.15
SMC1A-201ENST00000322213 CTIFO43310 598 aaKnown RBP7.88□□□□□ -1.15
SMC1A-201ENST00000322213 UBA7P41226 1012 aa7.88□□□□□ -1.15
SMC1A-201ENST00000322213 RBM6P78332 1123 aaKnown RBP7.88□□□□□ -1.15
SMC1A-201ENST00000322213 RAB3IL1Q8TBN0 382 aa7.88□□□□□ -1.15
SMC1A-201ENST00000322213 ARHGEF2Q92974 986 aaKnown RBP7.88□□□□□ -1.15
SMC1A-201ENST00000322213 KIAA1468Q9P260 1216 aa7.88□□□□□ -1.15
SMC1A-201ENST00000322213 DZIP1Q86YF9 867 aaKnown RBP7.88□□□□□ -1.15
SMC1A-201ENST00000322213 STAG1Q8WVM7 1258 aa7.88□□□□□ -1.15
SMC1A-201ENST00000322213 RAPGEF4Q8WZA2 1011 aa7.88□□□□□ -1.15
SMC1A-201ENST00000322213 PPANQ9NQ55 473 aaKnown RBP7.88□□□□□ -1.15
SMC1A-201ENST00000322213 GLI2P10070 1586 aa7.88□□□□□ -1.15
SMC1A-201ENST00000322213 MYL6BP14649 208 aa7.88□□□□□ -1.15
SMC1A-201ENST00000322213 POSTNQ15063 836 aa7.88□□□□□ -1.15
SMC1A-201ENST00000322213 NUTM2GQ5VZR2 741 aa7.88□□□□□ -1.15
SMC1A-201ENST00000322213 ALS2CLQ60I27 953 aa7.88□□□□□ -1.15
SMC1A-201ENST00000322213 MLKLQ8NB16 471 aa7.88□□□□□ -1.15
SMC1A-201ENST00000322213 SLC26A6Q9BXS9 759 aa7.88□□□□□ -1.15
SMC1A-201ENST00000322213 CNNM2Q9H8M5 875 aa7.88□□□□□ -1.15
SMC1A-201ENST00000322213 ARHGAP31Q2M1Z3 1444 aa7.88□□□□□ -1.15
SMC1A-201ENST00000322213 RHPN1Q8TCX5 695 aa7.87□□□□□ -1.15
SMC1A-201ENST00000322213 IFIH1Q9BYX4 1025 aaKnown RBP7.87□□□□□ -1.15
SMC1A-201ENST00000322213 FAM114A2Q9NRY5 505 aa7.87□□□□□ -1.15
SMC1A-201ENST00000322213 MIS18AQ9NYP9 233 aa7.87□□□□□ -1.15
SMC1A-201ENST00000322213 HDAC9Q9UKV0 1011 aa7.87□□□□□ -1.15
SMC1A-201ENST00000322213 PTPDC1A2A3K4 754 aa7.87□□□□□ -1.15
SMC1A-201ENST00000322213 STX10O60499 249 aa7.87□□□□□ -1.15
SMC1A-201ENST00000322213 VCX3AQ9NNX9 186 aa7.87□□□□□ -1.15
SMC1A-201ENST00000322213 FAN1Q9Y2M0 1017 aa7.87□□□□□ -1.15
SMC1A-201ENST00000322213 CEP104O60308 925 aa7.87□□□□□ -1.15
SMC1A-201ENST00000322213 EVI5O60447 810 aa7.87□□□□□ -1.15
SMC1A-201ENST00000322213 CCDC152Q4G0S7 254 aa7.87□□□□□ -1.15
SMC1A-201ENST00000322213 SF3B2Q13435 895 aaKnown RBP7.87□□□□□ -1.15
SMC1A-201ENST00000322213 PPP2R5EQ16537 467 aa7.87□□□□□ -1.15
SMC1A-201ENST00000322213 TEX11Q8IYF3 940 aa7.87□□□□□ -1.15
SMC1A-201ENST00000322213 ABTB2Q8N961 1025 aa7.87□□□□□ -1.15
SMC1A-201ENST00000322213 RAB17Q9H0T7 212 aa7.87□□□□□ -1.15
SMC1A-201ENST00000322213 CEP126Q9P2H0 1117 aa7.87□□□□□ -1.15
SMC1A-201ENST00000322213 PER1O15534 1290 aaPredicted RBP7.87□□□□□ -1.15
SMC1A-201ENST00000322213 SLFN14P0C7P3 912 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms