RNA–Protein interactions for RNA: ENST00000321358.11

YBX1-201, Transcript of Y-box binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene YBX1, Length 1,514 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-201ENST00000321358 SULF1Q8IWU6 871 aa25.27■■□□□ 1.64
YBX1-201ENST00000321358 DCP1AQ9NPI6 582 aaPredicted RBP25.27■■□□□ 1.64
YBX1-201ENST00000321358 CTNNA3Q9UI47 895 aa25.27■■□□□ 1.64
YBX1-201ENST00000321358 SCN4AP35499 1836 aa25.26■■□□□ 1.63
YBX1-201ENST00000321358 ASTN2O75129 1339 aaPredicted RBP25.26■■□□□ 1.63
YBX1-201ENST00000321358 FLT1P17948 1338 aa25.26■■□□□ 1.63
YBX1-201ENST00000321358 VPS53Q5VIR6 699 aa25.26■■□□□ 1.63
YBX1-201ENST00000321358 ZSCAN29Q8IWY8 852 aaPredicted RBP25.26■■□□□ 1.63
YBX1-201ENST00000321358 IFNL3Q8IZI9 196 aa25.26■■□□□ 1.63
YBX1-201ENST00000321358 MCM9Q9NXL9 1143 aa25.26■■□□□ 1.63
YBX1-201ENST00000321358 LDHDQ86WU2 507 aa25.25■■□□□ 1.63
YBX1-201ENST00000321358 FAM151AQ8WW52 585 aa25.25■■□□□ 1.63
YBX1-201ENST00000321358 FAM198AQ9UFP1 575 aa25.25■■□□□ 1.63
YBX1-201ENST00000321358 PGAP2Q9UHJ9 254 aa25.25■■□□□ 1.63
YBX1-201ENST00000321358 POLR3DP05423 398 aaPredicted RBP25.24■■□□□ 1.63
YBX1-201ENST00000321358 ALX1Q15699 326 aa25.24■■□□□ 1.63
YBX1-201ENST00000321358 OSBPL5Q9H0X9 879 aaPredicted RBP25.24■■□□□ 1.63
YBX1-201ENST00000321358 DEFB129Q9H1M3 183 aa25.24■■□□□ 1.63
YBX1-201ENST00000321358 DHX36Q9H2U1 1008 aaKnown RBP25.24■■□□□ 1.63
YBX1-201ENST00000321358 DDX4Q9NQI0 724 aaKnown RBP25.24■■□□□ 1.63
YBX1-201ENST00000321358 RASA3Q14644 834 aa25.23■■□□□ 1.63
YBX1-201ENST00000321358 KRT26Q7Z3Y9 468 aa25.23■■□□□ 1.63
YBX1-201ENST00000321358 PPP2R3BQ9Y5P8 575 aa25.23■■□□□ 1.63
YBX1-201ENST00000321358 U3KPZ7 1027 aaPredicted RBP25.23■■□□□ 1.63
YBX1-201ENST00000321358 KIF3CO14782 793 aa25.22■■□□□ 1.63
YBX1-201ENST00000321358 FGAP02671 866 aa25.22■■□□□ 1.63
YBX1-201ENST00000321358 HLA-DOAP06340 250 aa25.22■■□□□ 1.63
YBX1-201ENST00000321358 TTC6Q86TZ1 520 aa25.22■■□□□ 1.63
YBX1-201ENST00000321358 ARPP21Q9UBL0 812 aaPredicted RBP25.22■■□□□ 1.63
YBX1-201ENST00000321358 SAP30BPQ9UHR5 308 aaKnown RBP25.22■■□□□ 1.63
YBX1-201ENST00000321358 PTH1RQ03431 593 aa25.22■■□□□ 1.63
YBX1-201ENST00000321358 CDC37L1Q7L3B6 337 aa25.22■■□□□ 1.63
YBX1-201ENST00000321358 MAP4K1Q92918 833 aa25.22■■□□□ 1.63
YBX1-201ENST00000321358 LSG1Q9H089 658 aaKnown RBP25.22■■□□□ 1.63
YBX1-201ENST00000321358 MKRN1Q9UHC7 482 aaKnown RBP25.22■■□□□ 1.63
YBX1-201ENST00000321358 USP17L12C9JPN9 530 aa25.21■■□□□ 1.63
YBX1-201ENST00000321358 USP17L21D6R901 530 aa25.21■■□□□ 1.63
YBX1-201ENST00000321358 EPB41L2O43491 1005 aaKnown RBP25.21■■□□□ 1.63
YBX1-201ENST00000321358 UPF2Q9HAU5 1272 aaKnown RBP25.21■■□□□ 1.63
YBX1-201ENST00000321358 EPB41L4AQ9HCS5 686 aaPredicted RBP25.21■■□□□ 1.63
YBX1-201ENST00000321358 PALD1Q9ULE6 856 aa25.21■■□□□ 1.63
YBX1-201ENST00000321358 ADAMTSL1Q8N6G6 1762 aa25.21■■□□□ 1.63
YBX1-201ENST00000321358 IMMTQ16891 758 aaKnown RBP25.2■■□□□ 1.62
YBX1-201ENST00000321358 HOOK2Q96ED9 719 aa25.2■■□□□ 1.62
YBX1-201ENST00000321358 TMEM39BQ9GZU3 492 aa25.2■■□□□ 1.62
YBX1-201ENST00000321358 SCAF8Q9UPN6 1271 aaKnown RBP25.2■■□□□ 1.62
YBX1-201ENST00000321358 ZMYM6O95789 1325 aa25.2■■□□□ 1.62
YBX1-201ENST00000321358 MINDY4BA8MYZ0 360 aa25.19■■□□□ 1.62
YBX1-201ENST00000321358 FOXP2O15409 715 aa25.19■■□□□ 1.62
YBX1-201ENST00000321358 POTEIP0CG38 1075 aa25.19■■□□□ 1.62
YBX1-201ENST00000321358 POTEJP0CG39 1038 aa25.19■■□□□ 1.62
YBX1-201ENST00000321358 SBK1Q52WX2 424 aa25.19■■□□□ 1.62
YBX1-201ENST00000321358 CTR9Q6PD62 1173 aa25.19■■□□□ 1.62
YBX1-201ENST00000321358 ZFPM1Q8IX07 1006 aa25.19■■□□□ 1.62
YBX1-201ENST00000321358 ZNF213O14771 459 aa25.18■■□□□ 1.62
YBX1-201ENST00000321358 SLC3A2P08195 630 aaKnown RBP25.18■■□□□ 1.62
YBX1-201ENST00000321358 MCCP23508 829 aa25.18■■□□□ 1.62
YBX1-201ENST00000321358 RNF20Q5VTR2 975 aa25.18■■□□□ 1.62
YBX1-201ENST00000321358 USP48Q86UV5 1035 aa25.18■■□□□ 1.62
YBX1-201ENST00000321358 CSRNP1Q96S65 589 aa25.18■■□□□ 1.62
YBX1-201ENST00000321358 TRIM34Q9BYJ4 488 aa25.18■■□□□ 1.62
YBX1-201ENST00000321358 PI4KBQ9UBF8 816 aa25.18■■□□□ 1.62
YBX1-201ENST00000321358 RBM8AQ9Y5S9 174 aaKnown RBP25.18■■□□□ 1.62
YBX1-201ENST00000321358 CNTNAP1P78357 1384 aa25.18■■□□□ 1.62
YBX1-201ENST00000321358 SUPT20HL1Q3ZLR7 823 aa25.17■■□□□ 1.62
YBX1-201ENST00000321358 MAP1SQ66K74 1059 aaPredicted RBP25.17■■□□□ 1.62
YBX1-201ENST00000321358 BACH2Q9BYV9 841 aa25.17■■□□□ 1.62
YBX1-201ENST00000321358 SLC4A8Q2Y0W8 1093 aa25.17■■□□□ 1.62
YBX1-201ENST00000321358 C12orf60Q5U649 245 aa25.17■■□□□ 1.62
YBX1-201ENST00000321358 CHADLQ6NUI6 762 aa25.17■■□□□ 1.62
YBX1-201ENST00000321358 CRACR2BQ8N4Y2 399 aaPredicted RBP25.17■■□□□ 1.62
YBX1-201ENST00000321358 DDTLA6NHG4 134 aaPredicted RBP25.16■■□□□ 1.62
YBX1-201ENST00000321358 USP26Q9BXU7 913 aa25.16■■□□□ 1.62
YBX1-201ENST00000321358 ATRNL1Q5VV63 1379 aa25.15■■□□□ 1.62
YBX1-201ENST00000321358 ADM5C9JUS6 153 aa25.15■■□□□ 1.62
YBX1-201ENST00000321358 SEC24BO95487 1268 aa25.15■■□□□ 1.62
YBX1-201ENST00000321358 NF2P35240 595 aa25.15■■□□□ 1.62
YBX1-201ENST00000321358 PPARAQ07869 468 aa25.15■■□□□ 1.62
YBX1-201ENST00000321358 FOXP4Q8IVH2 680 aaPredicted RBP25.15■■□□□ 1.62
YBX1-201ENST00000321358 GLIS2Q9BZE0 524 aaPredicted RBP25.15■■□□□ 1.62
YBX1-201ENST00000321358 ZNF287Q9HBT7 754 aa25.15■■□□□ 1.62
YBX1-201ENST00000321358 COL2A1P02458 1487 aaPredicted RBP25.14■■□□□ 1.62
YBX1-201ENST00000321358 ZKSCAN1P17029 563 aaPredicted RBP25.14■■□□□ 1.62
YBX1-201ENST00000321358 SERPINB13Q9UIV8 391 aa25.14■■□□□ 1.62
YBX1-201ENST00000321358 TAOK2Q9UL54 1235 aa25.14■■□□□ 1.62
YBX1-201ENST00000321358 CYP2D7A0A087X1C5 515 aa25.13■■□□□ 1.61
YBX1-201ENST00000321358 CYP2D6P10635 497 aa25.13■■□□□ 1.61
YBX1-201ENST00000321358 PLCD1P51178 756 aa25.13■■□□□ 1.61
YBX1-201ENST00000321358 SH3BP5LQ7L8J4 393 aa25.13■■□□□ 1.61
YBX1-201ENST00000321358 EHD4Q9H223 541 aa25.13■■□□□ 1.61
YBX1-201ENST00000321358 HAND2P61296 217 aa25.12■■□□□ 1.61
YBX1-201ENST00000321358 PRAMEF18Q5VWM3 479 aa25.12■■□□□ 1.61
YBX1-201ENST00000321358 DCAF15Q66K64 600 aa25.12■■□□□ 1.61
YBX1-201ENST00000321358 TEPSINQ96N21 525 aa25.12■■□□□ 1.61
YBX1-201ENST00000321358 HERC5Q9UII4 1024 aaKnown RBP25.12■■□□□ 1.61
YBX1-201ENST00000321358 ANAPC4Q9UJX5 808 aa25.12■■□□□ 1.61
YBX1-201ENST00000321358 PDE4BQ07343 736 aa25.12■■□□□ 1.61
YBX1-201ENST00000321358 NECTIN1Q15223 517 aa25.12■■□□□ 1.61
YBX1-201ENST00000321358 NBPF12Q5TAG4 269 aaPredicted RBP25.12■■□□□ 1.61
YBX1-201ENST00000321358 SMC1BQ8NDV3 1235 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms