RNA–Protein interactions for RNA: ENST00000321143.8

HCCS-201, Transcript of holocytochrome c synthase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HCCS, Length 2,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCCS-201ENST00000321143 ERCC4Q92889 916 aaPredicted RBP22.03■■□□□ 1.12
HCCS-201ENST00000321143 SENP2Q9HC62 589 aa22.03■■□□□ 1.12
HCCS-201ENST00000321143 COL4A1P02462 1669 aa22.03■■□□□ 1.12
HCCS-201ENST00000321143 ZPR1O75312 459 aa22.03■■□□□ 1.12
HCCS-201ENST00000321143 MBD4O95243 580 aa22.03■■□□□ 1.12
HCCS-201ENST00000321143 LRMPQ12912 555 aa22.03■■□□□ 1.12
HCCS-201ENST00000321143 ERFEQ4G0M1 354 aa22.03■■□□□ 1.12
HCCS-201ENST00000321143 TRAPPC3LQ5T215 181 aa22.03■■□□□ 1.12
HCCS-201ENST00000321143 CLEC4GQ6UXB4 293 aa22.03■■□□□ 1.12
HCCS-201ENST00000321143 NAPBQ9H115 298 aa22.03■■□□□ 1.12
HCCS-201ENST00000321143 EPB41L4AQ9HCS5 686 aaPredicted RBP22.03■■□□□ 1.12
HCCS-201ENST00000321143 SCN7AQ01118 1682 aa22.02■■□□□ 1.12
HCCS-201ENST00000321143 ZBTB43O43298 467 aa22.02■■□□□ 1.12
HCCS-201ENST00000321143 CDC27P30260 824 aa22.02■■□□□ 1.12
HCCS-201ENST00000321143 NFXL1Q6ZNB6 911 aa22.02■■□□□ 1.12
HCCS-201ENST00000321143 MICU3Q86XE3 530 aa22.02■■□□□ 1.12
HCCS-201ENST00000321143 AIFM3Q96NN9 605 aa22.02■■□□□ 1.12
HCCS-201ENST00000321143 MRFAP1L1Q96HT8 127 aa22.01■■□□□ 1.11
HCCS-201ENST00000321143 NAT10Q9H0A0 1025 aaKnown RBP22.01■■□□□ 1.11
HCCS-201ENST00000321143 LY9Q9HBG7 655 aa22.01■■□□□ 1.11
HCCS-201ENST00000321143 ZNF652Q9Y2D9 606 aa22.01■■□□□ 1.11
HCCS-201ENST00000321143 RFC4P35249 363 aa22.01■■□□□ 1.11
HCCS-201ENST00000321143 PARP10Q53GL7 1025 aa22.01■■□□□ 1.11
HCCS-201ENST00000321143 TMEM67Q5HYA8 995 aa22.01■■□□□ 1.11
HCCS-201ENST00000321143 SGMS1Q86VZ5 419 aa22.01■■□□□ 1.11
HCCS-201ENST00000321143 ARMT1Q9H993 441 aa22.01■■□□□ 1.11
HCCS-201ENST00000321143 INCENPQ9NQS7 918 aa22.01■■□□□ 1.11
HCCS-201ENST00000321143 CCDC152Q4G0S7 254 aa22■■□□□ 1.11
HCCS-201ENST00000321143 KRT40Q6A162 431 aa22■■□□□ 1.11
HCCS-201ENST00000321143 PHKBQ93100 1093 aa22■■□□□ 1.11
HCCS-201ENST00000321143 KIAA1468Q9P260 1216 aa22■■□□□ 1.11
HCCS-201ENST00000321143 CTDSPL2Q05D32 466 aa22■■□□□ 1.11
HCCS-201ENST00000321143 CCDC144BQ3MJ40 725 aa22■■□□□ 1.11
HCCS-201ENST00000321143 CCDC144CPQ8IYA2 1237 aa22■■□□□ 1.11
HCCS-201ENST00000321143 GOLGA8AA7E2F4 631 aa21.99■■□□□ 1.11
HCCS-201ENST00000321143 IGHMBP2P38935 993 aaKnown RBP21.99■■□□□ 1.11
HCCS-201ENST00000321143 ZNF827Q17R98 1081 aa21.99■■□□□ 1.11
HCCS-201ENST00000321143 SLC27A3Q5K4L6 730 aa21.99■■□□□ 1.11
HCCS-201ENST00000321143 AXDND1Q5T1B0 1012 aaPredicted RBP21.99■■□□□ 1.11
HCCS-201ENST00000321143 VPS37DQ86XT2 251 aa21.99■■□□□ 1.11
HCCS-201ENST00000321143 MAP7D2Q96T17 732 aa21.99■■□□□ 1.11
HCCS-201ENST00000321143 DOCK2Q92608 1830 aa21.99■■□□□ 1.11
HCCS-201ENST00000321143 CMA1P23946 247 aa21.99■■□□□ 1.11
HCCS-201ENST00000321143 GTF2F1P35269 517 aaKnown RBP eCLIP21.99■■□□□ 1.11
HCCS-201ENST00000321143 IARSP41252 1262 aaKnown RBP21.99■■□□□ 1.11
HCCS-201ENST00000321143 LIFRP42702 1097 aa21.99■■□□□ 1.11
HCCS-201ENST00000321143 SLC39A14Q15043 492 aa21.99■■□□□ 1.11
HCCS-201ENST00000321143 NTRK3Q16288 839 aa21.99■■□□□ 1.11
HCCS-201ENST00000321143 AOPEPQ8N6M6 819 aa21.99■■□□□ 1.11
HCCS-201ENST00000321143 CACTINQ8WUQ7 758 aaKnown RBP21.99■■□□□ 1.11
HCCS-201ENST00000321143 FBXW7Q969H0 707 aa21.99■■□□□ 1.11
HCCS-201ENST00000321143 ZSWIM5Q9P217 1185 aa21.99■■□□□ 1.11
HCCS-201ENST00000321143 CASZ1Q86V15 1759 aa21.98■■□□□ 1.11
HCCS-201ENST00000321143 GSG1L2A8MUP6 293 aa21.98■■□□□ 1.11
HCCS-201ENST00000321143 IFIT3O14879 490 aaKnown RBP21.98■■□□□ 1.11
HCCS-201ENST00000321143 ZNF202O95125 648 aa21.98■■□□□ 1.11
HCCS-201ENST00000321143 BCAMP50895 628 aa21.98■■□□□ 1.11
HCCS-201ENST00000321143 CNNM2Q9H8M5 875 aa21.98■■□□□ 1.11
HCCS-201ENST00000321143 FAM217BQ9NTX9 383 aaPredicted RBP21.98■■□□□ 1.11
HCCS-201ENST00000321143 CHAF1AQ13111 956 aaPredicted RBP21.97■■□□□ 1.11
HCCS-201ENST00000321143 ZRSR1Q15695 479 aaKnown RBP21.97■■□□□ 1.11
HCCS-201ENST00000321143 AKNAD1Q5T1N1 836 aa21.97■■□□□ 1.11
HCCS-201ENST00000321143 MYL10Q9BUA6 226 aa21.97■■□□□ 1.11
HCCS-201ENST00000321143 PFKFB1P16118 471 aa21.97■■□□□ 1.11
HCCS-201ENST00000321143 GNL2Q13823 731 aaKnown RBP21.97■■□□□ 1.11
HCCS-201ENST00000321143 SETDB2Q96T68 719 aa21.97■■□□□ 1.11
HCCS-201ENST00000321143 KRT23Q9C075 422 aa21.97■■□□□ 1.11
HCCS-201ENST00000321143 SLC12A7Q9Y666 1083 aa21.97■■□□□ 1.11
HCCS-201ENST00000321143 TACC3Q9Y6A5 838 aa21.97■■□□□ 1.11
HCCS-201ENST00000321143 RTL9Q8NET4 1388 aa21.97■■□□□ 1.11
HCCS-201ENST00000321143 CCDC69A6NI79 296 aa21.96■■□□□ 1.11
HCCS-201ENST00000321143 RANBP6O60518 1105 aaKnown RBP21.96■■□□□ 1.11
HCCS-201ENST00000321143 WDHD1O75717 1129 aaPredicted RBP21.96■■□□□ 1.11
HCCS-201ENST00000321143 SLC3A2P08195 630 aaKnown RBP21.96■■□□□ 1.11
HCCS-201ENST00000321143 GNAT2P19087 354 aa21.96■■□□□ 1.11
HCCS-201ENST00000321143 MARCKSP29966 332 aaPredicted RBP21.96■■□□□ 1.11
HCCS-201ENST00000321143 TAOK2Q9UL54 1235 aa21.96■■□□□ 1.11
HCCS-201ENST00000321143 PRKAB2O43741 272 aa21.96■■□□□ 1.11
HCCS-201ENST00000321143 TRIM29Q14134 588 aa21.96■■□□□ 1.11
HCCS-201ENST00000321143 MFSD6Q6ZSS7 791 aa21.96■■□□□ 1.11
HCCS-201ENST00000321143 LCORLQ8N3X6 602 aa21.96■■□□□ 1.11
HCCS-201ENST00000321143 NACAP1Q9BZK3 213 aa21.96■■□□□ 1.11
HCCS-201ENST00000321143 PNPLA7Q6ZV29 1317 aa21.95■■□□□ 1.11
HCCS-201ENST00000321143 PLSCR1O15162 318 aa21.95■■□□□ 1.1
HCCS-201ENST00000321143 TDO2P48775 406 aa21.95■■□□□ 1.1
HCCS-201ENST00000321143 NFIXQ14938 502 aa21.95■■□□□ 1.1
HCCS-201ENST00000321143 SLC4A4Q9Y6R1 1079 aa21.95■■□□□ 1.1
HCCS-201ENST00000321143 PPP6R2O75170 966 aa21.95■■□□□ 1.1
HCCS-201ENST00000321143 DPCR1Q3MIW9 517 aa21.95■■□□□ 1.1
HCCS-201ENST00000321143 MTERF4Q7Z6M4 381 aaKnown RBP21.95■■□□□ 1.1
HCCS-201ENST00000321143 LRRC8AQ8IWT6 810 aa21.95■■□□□ 1.1
HCCS-201ENST00000321143 BPIFA3Q9BQP9 254 aa21.95■■□□□ 1.1
HCCS-201ENST00000321143 TIAM2Q8IVF5 1701 aa21.95■■□□□ 1.1
HCCS-201ENST00000321143 TNS1Q9HBL0 1735 aaKnown RBP21.95■■□□□ 1.1
HCCS-201ENST00000321143 MROH7-TTC4A0A0A0MT08 1334 aa21.94■■□□□ 1.1
HCCS-201ENST00000321143 STK36Q9NRP7 1315 aa21.94■■□□□ 1.1
HCCS-201ENST00000321143 GYS1P13807 737 aa21.94■■□□□ 1.1
HCCS-201ENST00000321143 U2AF2P26368 475 aaKnown RBP eCLIP21.94■■□□□ 1.1
HCCS-201ENST00000321143 CHRNDQ07001 517 aa21.94■■□□□ 1.1
HCCS-201ENST00000321143 SSRP1Q08945 709 aaKnown RBP21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms