RNA–Protein interactions for RNA: ENST00000321110.1

RTL3-201, Transcript of retrotransposon Gag like 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RTL3, Length 2,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3-201ENST00000321110 SHTN1A0MZ66 631 aa9.04□□□□□ -0.96
RTL3-201ENST00000321110 GOLGA6CA6NDK9 693 aa9.04□□□□□ -0.96
RTL3-201ENST00000321110 CHUKO15111 745 aa9.04□□□□□ -0.96
RTL3-201ENST00000321110 NEBLO76041 1014 aa9.04□□□□□ -0.96
RTL3-201ENST00000321110 GOLGA6DP0CG33 693 aa9.04□□□□□ -0.96
RTL3-201ENST00000321110 MARCKSP29966 332 aaPredicted RBP9.04□□□□□ -0.96
RTL3-201ENST00000321110 SYKP43405 635 aa9.04□□□□□ -0.96
RTL3-201ENST00000321110 USP14P54578 494 aa9.04□□□□□ -0.96
RTL3-201ENST00000321110 INHBEP58166 350 aa9.04□□□□□ -0.96
RTL3-201ENST00000321110 GNGT1P63211 74 aa9.04□□□□□ -0.96
RTL3-201ENST00000321110 FMR1Q06787 632 aaKnown RBP eCLIP9.04□□□□□ -0.96
RTL3-201ENST00000321110 PPFIA1Q13136 1202 aa9.04□□□□□ -0.96
RTL3-201ENST00000321110 HDGFL1Q5TGJ6 251 aa9.04□□□□□ -0.96
RTL3-201ENST00000321110 MYSM1Q5VVJ2 828 aa9.04□□□□□ -0.96
RTL3-201ENST00000321110 NAIF1Q69YI7 327 aaPredicted RBP9.04□□□□□ -0.96
RTL3-201ENST00000321110 METTL16Q86W50 562 aaKnown RBP9.04□□□□□ -0.96
RTL3-201ENST00000321110 GSPT2Q8IYD1 628 aaKnown RBP9.04□□□□□ -0.96
RTL3-201ENST00000321110 CAPS2Q9BXY5 557 aa9.04□□□□□ -0.96
RTL3-201ENST00000321110 VEZTQ9HBM0 779 aa9.04□□□□□ -0.96
RTL3-201ENST00000321110 GJB4Q9NTQ9 266 aa9.04□□□□□ -0.96
RTL3-201ENST00000321110 GOLGA6AQ9NYA3 693 aa9.04□□□□□ -0.96
RTL3-201ENST00000321110 KIF28PB7ZC32 967 aa9.03□□□□□ -0.96
RTL3-201ENST00000321110 AKR1B15C9JRZ8 316 aaPredicted RBP9.03□□□□□ -0.96
RTL3-201ENST00000321110 H0YHG0 523 aa9.03□□□□□ -0.96
RTL3-201ENST00000321110 IRF6O14896 467 aa9.03□□□□□ -0.96
RTL3-201ENST00000321110 ZMYND10O75800 440 aa9.03□□□□□ -0.96
RTL3-201ENST00000321110 MYBL2P10244 700 aa9.03□□□□□ -0.96
RTL3-201ENST00000321110 GCFC2P16383 781 aaKnown RBP9.03□□□□□ -0.96
RTL3-201ENST00000321110 OLFM4Q6UX06 510 aa9.03□□□□□ -0.96
RTL3-201ENST00000321110 RASGRP2Q7LDG7 609 aa9.03□□□□□ -0.96
RTL3-201ENST00000321110 JMYQ8N9B5 988 aa9.03□□□□□ -0.96
RTL3-201ENST00000321110 PANX2Q96RD6 677 aa9.03□□□□□ -0.96
RTL3-201ENST00000321110 HPSEQ9Y251 543 aa9.03□□□□□ -0.96
RTL3-201ENST00000321110 NFE2L3Q9Y4A8 694 aa9.03□□□□□ -0.96
RTL3-201ENST00000321110 PI4KAP2A4QPH2 592 aa9.03□□□□□ -0.96
RTL3-201ENST00000321110 MAP2K1Q02750 393 aaPredicted RBP9.03□□□□□ -0.96
RTL3-201ENST00000321110 BIRC2Q13490 618 aa9.03□□□□□ -0.96
RTL3-201ENST00000321110 WLSQ5T9L3 541 aa9.03□□□□□ -0.96
RTL3-201ENST00000321110 DHX32Q7L7V1 743 aaKnown RBP9.03□□□□□ -0.96
RTL3-201ENST00000321110 TRMT44Q8IYL2 757 aaKnown RBP9.03□□□□□ -0.96
RTL3-201ENST00000321110 PI4KAP1Q8N8J0 262 aa9.03□□□□□ -0.96
RTL3-201ENST00000321110 ACRBPQ8NEB7 543 aa9.03□□□□□ -0.96
RTL3-201ENST00000321110 CCDC148Q8NFR7 591 aa9.03□□□□□ -0.96
RTL3-201ENST00000321110 ESF1Q9H501 851 aaKnown RBP9.03□□□□□ -0.96
RTL3-201ENST00000321110 ODF2LQ9ULJ1 636 aa9.03□□□□□ -0.96
RTL3-201ENST00000321110 PCDHA5Q9Y5H7 936 aa9.03□□□□□ -0.96
RTL3-201ENST00000321110 SBNO1A3KN83 1393 aa9.03□□□□□ -0.96
RTL3-201ENST00000321110 RGPD1P0DJD0 1748 aa9.03□□□□□ -0.96
RTL3-201ENST00000321110 TEX33O43247 280 aa9.02□□□□□ -0.96
RTL3-201ENST00000321110 IBSPP21815 317 aaPredicted RBP9.02□□□□□ -0.96
RTL3-201ENST00000321110 PDIA3P30101 505 aaKnown RBP9.02□□□□□ -0.96
RTL3-201ENST00000321110 NF2P35240 595 aa9.02□□□□□ -0.96
RTL3-201ENST00000321110 RDXP35241 583 aaKnown RBP9.02□□□□□ -0.96
RTL3-201ENST00000321110 RBL2Q08999 1139 aa9.02□□□□□ -0.96
RTL3-201ENST00000321110 NR1I3Q14994 352 aa9.02□□□□□ -0.96
RTL3-201ENST00000321110 ANO1Q5XXA6 986 aa9.02□□□□□ -0.96
RTL3-201ENST00000321110 SHC4Q6S5L8 630 aa9.02□□□□□ -0.96
RTL3-201ENST00000321110 TEX11Q8IYF3 940 aa9.02□□□□□ -0.96
RTL3-201ENST00000321110 MED15Q96RN5 788 aa9.02□□□□□ -0.96
RTL3-201ENST00000321110 SH3GL2Q99962 352 aa9.02□□□□□ -0.96
RTL3-201ENST00000321110 CRACR2AQ9BSW2 395 aa9.02□□□□□ -0.96
RTL3-201ENST00000321110 NBPF3Q9H094 633 aa9.02□□□□□ -0.96
RTL3-201ENST00000321110 MYO6Q9UM54 1294 aa9.02□□□□□ -0.96
RTL3-201ENST00000321110 ATXN2Q99700 1313 aaKnown RBP9.02□□□□□ -0.97
RTL3-201ENST00000321110 FOXN1O15353 648 aa9.02□□□□□ -0.97
RTL3-201ENST00000321110 ARHGAP25P42331 645 aa9.02□□□□□ -0.97
RTL3-201ENST00000321110 EXOSC10Q01780 885 aaKnown RBP9.02□□□□□ -0.97
RTL3-201ENST00000321110 ACTN3Q08043 901 aaPredicted RBP9.02□□□□□ -0.97
RTL3-201ENST00000321110 TMED8Q6PL24 325 aaPredicted RBP9.02□□□□□ -0.97
RTL3-201ENST00000321110 OTUD6BQ8N6M0 293 aa9.02□□□□□ -0.97
RTL3-201ENST00000321110 CPLX3Q8WVH0 158 aa9.02□□□□□ -0.97
RTL3-201ENST00000321110 NUDT16Q96DE0 195 aaKnown RBP9.02□□□□□ -0.97
RTL3-201ENST00000321110 SELENOOQ9BVL4 669 aa9.02□□□□□ -0.97
RTL3-201ENST00000321110 AGXT2Q9BYV1 514 aa9.02□□□□□ -0.97
RTL3-201ENST00000321110 SAMSN1Q9NSI8 373 aaKnown RBP9.02□□□□□ -0.97
RTL3-201ENST00000321110 U3KPZ7 1027 aaPredicted RBP9.02□□□□□ -0.97
RTL3-201ENST00000321110 ZNF609O15014 1411 aa9.02□□□□□ -0.97
RTL3-201ENST00000321110 A0A0G2JLW4 131 aa9.01□□□□□ -0.97
RTL3-201ENST00000321110 KIF3CO14782 793 aa9.01□□□□□ -0.97
RTL3-201ENST00000321110 MEFVO15553 781 aaPredicted RBP9.01□□□□□ -0.97
RTL3-201ENST00000321110 AMPHP49418 695 aa9.01□□□□□ -0.97
RTL3-201ENST00000321110 LONRF3Q496Y0 759 aa9.01□□□□□ -0.97
RTL3-201ENST00000321110 IQCA1Q86XH1 822 aa9.01□□□□□ -0.97
RTL3-201ENST00000321110 NDUFB9Q9Y6M9 179 aa9.01□□□□□ -0.97
RTL3-201ENST00000321110 NCAPD2Q15021 1401 aa9.01□□□□□ -0.97
RTL3-201ENST00000321110 PEAK1Q9H792 1746 aa9.01□□□□□ -0.97
RTL3-201ENST00000321110 GOLGA6BA6NDN3 693 aa9.01□□□□□ -0.97
RTL3-201ENST00000321110 RTN2O75298 545 aa9.01□□□□□ -0.97
RTL3-201ENST00000321110 A1BGP04217 495 aa9.01□□□□□ -0.97
RTL3-201ENST00000321110 MRPL12P52815 198 aaKnown RBP9.01□□□□□ -0.97
RTL3-201ENST00000321110 CHST3Q7LGC8 479 aa9.01□□□□□ -0.97
RTL3-201ENST00000321110 C8orf76Q96K31 380 aa9.01□□□□□ -0.97
RTL3-201ENST00000321110 MMS19Q96T76 1030 aa9.01□□□□□ -0.97
RTL3-201ENST00000321110 KLC4Q9NSK0 619 aa9.01□□□□□ -0.97
RTL3-201ENST00000321110 RBM28Q9NW13 759 aaKnown RBP9.01□□□□□ -0.97
RTL3-201ENST00000321110 A0A1B0GTH6 734 aa9.01□□□□□ -0.97
RTL3-201ENST00000321110 NDUFAB1O14561 156 aa9.01□□□□□ -0.97
RTL3-201ENST00000321110 RASSF9O75901 435 aa9.01□□□□□ -0.97
RTL3-201ENST00000321110 KIAA0754O94854 1291 aa9.01□□□□□ -0.97
RTL3-201ENST00000321110 EIF2S2P20042 333 aaKnown RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms