RNA–Protein interactions for RNA: ENST00000320672.8

SSBP2-201, Transcript of single stranded DNA binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP2, Length 8,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-201ENST00000320672 HMG20BQ9P0W2 317 aa9.92□□□□□ -0.82
SSBP2-201ENST00000320672 SPOPO43791 374 aa9.92□□□□□ -0.82
SSBP2-201ENST00000320672 SLU7O95391 586 aaKnown RBP9.92□□□□□ -0.82
SSBP2-201ENST00000320672 GUCY2FP51841 1108 aa9.92□□□□□ -0.82
SSBP2-201ENST00000320672 CKAP4Q07065 602 aaKnown RBP9.92□□□□□ -0.82
SSBP2-201ENST00000320672 HDAC1Q13547 482 aaPredicted RBP9.92□□□□□ -0.82
SSBP2-201ENST00000320672 CPLX4Q7Z7G2 160 aa9.92□□□□□ -0.82
SSBP2-201ENST00000320672 NOP9Q86U38 636 aaKnown RBP9.92□□□□□ -0.82
SSBP2-201ENST00000320672 PUS3Q9BZE2 481 aaKnown RBP9.92□□□□□ -0.82
SSBP2-201ENST00000320672 CLRN2A0PK11 232 aa9.92□□□□□ -0.82
SSBP2-201ENST00000320672 RASGRP4Q8TDF6 673 aa9.92□□□□□ -0.82
SSBP2-201ENST00000320672 Q3C1V9 767 aa9.92□□□□□ -0.82
SSBP2-201ENST00000320672 DCLK2Q8N568 766 aa9.92□□□□□ -0.82
SSBP2-201ENST00000320672 JDP2Q8WYK2 163 aa9.92□□□□□ -0.82
SSBP2-201ENST00000320672 BCAMP50895 628 aa9.92□□□□□ -0.82
SSBP2-201ENST00000320672 APOL6Q9BWW8 343 aa9.92□□□□□ -0.82
SSBP2-201ENST00000320672 RMND1Q9NWS8 449 aa9.92□□□□□ -0.82
SSBP2-201ENST00000320672 SSX2IPQ9Y2D8 614 aa9.92□□□□□ -0.82
SSBP2-201ENST00000320672 PCDHB13Q9Y5F0 798 aa9.92□□□□□ -0.82
SSBP2-201ENST00000320672 ZNF532Q9HCE3 1301 aa9.92□□□□□ -0.82
SSBP2-201ENST00000320672 STXBP4Q6ZWJ1 553 aa9.92□□□□□ -0.82
SSBP2-201ENST00000320672 BCS1LQ9Y276 419 aa9.92□□□□□ -0.82
SSBP2-201ENST00000320672 TNFAIP3P21580 790 aa9.91□□□□□ -0.82
SSBP2-201ENST00000320672 SAT1P21673 171 aa9.91□□□□□ -0.82
SSBP2-201ENST00000320672 RPS6KB1P23443 525 aa9.91□□□□□ -0.82
SSBP2-201ENST00000320672 PPP2R3AQ06190 1150 aa9.91□□□□□ -0.82
SSBP2-201ENST00000320672 TPH2Q8IWU9 490 aa9.91□□□□□ -0.82
SSBP2-201ENST00000320672 BAG1Q99933 345 aaPredicted RBP9.91□□□□□ -0.82
SSBP2-201ENST00000320672 FAM169AQ9Y6X4 670 aa9.91□□□□□ -0.82
SSBP2-201ENST00000320672 SEPT14Q6ZU15 432 aa9.91□□□□□ -0.82
SSBP2-201ENST00000320672 SPICE1Q8N0Z3 855 aa9.91□□□□□ -0.82
SSBP2-201ENST00000320672 ZNF653Q96CK0 615 aa9.91□□□□□ -0.82
SSBP2-201ENST00000320672 TLR7Q9NYK1 1049 aaKnown RBP9.91□□□□□ -0.82
SSBP2-201ENST00000320672 KRT222Q8N1A0 295 aa9.91□□□□□ -0.82
SSBP2-201ENST00000320672 TACO1Q9BSH4 297 aaKnown RBP9.91□□□□□ -0.82
SSBP2-201ENST00000320672 FTOQ9C0B1 505 aaKnown RBP eCLIP9.91□□□□□ -0.824e-11■■■■■ 28.4
SSBP2-201ENST00000320672 CEP104O60308 925 aa9.91□□□□□ -0.82
SSBP2-201ENST00000320672 CNGA1P29973 690 aa9.91□□□□□ -0.82
SSBP2-201ENST00000320672 SMAD1Q15797 465 aaKnown RBP9.91□□□□□ -0.82
SSBP2-201ENST00000320672 FAM47CQ5HY64 1035 aa9.91□□□□□ -0.82
SSBP2-201ENST00000320672 DCTPP1Q9H773 170 aa9.91□□□□□ -0.82
SSBP2-201ENST00000320672 RTEL1Q9NZ71 1219 aa9.91□□□□□ -0.82
SSBP2-201ENST00000320672 ZKSCAN5Q9Y2L8 839 aa9.91□□□□□ -0.82
SSBP2-201ENST00000320672 TYW1BQ6NUM6 668 aa9.91□□□□□ -0.82
SSBP2-201ENST00000320672 LINS1Q8NG48 757 aa9.91□□□□□ -0.82
SSBP2-201ENST00000320672 FNBP1Q96RU3 617 aa9.91□□□□□ -0.82
SSBP2-201ENST00000320672 CYP2J2P51589 502 aa9.91□□□□□ -0.82
SSBP2-201ENST00000320672 GTF2A1P52655 376 aaPredicted RBP9.91□□□□□ -0.82
SSBP2-201ENST00000320672 ABCF3Q9NUQ8 709 aa9.91□□□□□ -0.82
SSBP2-201ENST00000320672 CDC25AP30304 524 aa9.91□□□□□ -0.82
SSBP2-201ENST00000320672 KIAA0825Q8IV33 1275 aa9.91□□□□□ -0.82
SSBP2-201ENST00000320672 MYCT1Q8N699 235 aa9.91□□□□□ -0.82
SSBP2-201ENST00000320672 GOLGA1Q92805 767 aa9.91□□□□□ -0.82
SSBP2-201ENST00000320672 TFAP4Q01664 338 aa9.9□□□□□ -0.82
SSBP2-201ENST00000320672 KANK3Q6NY19 840 aa9.9□□□□□ -0.82
SSBP2-201ENST00000320672 PI16Q6UXB8 463 aa9.9□□□□□ -0.82
SSBP2-201ENST00000320672 SV2BQ7L1I2 683 aa9.9□□□□□ -0.82
SSBP2-201ENST00000320672 SNX29Q8TEQ0 813 aa9.9□□□□□ -0.82
SSBP2-201ENST00000320672 DDX23Q9BUQ8 820 aaKnown RBP9.9□□□□□ -0.82
SSBP2-201ENST00000320672 SELENOOQ9BVL4 669 aa9.9□□□□□ -0.82
SSBP2-201ENST00000320672 HSPA1LP34931 641 aa9.9□□□□□ -0.82
SSBP2-201ENST00000320672 TECP42680 631 aa9.9□□□□□ -0.82
SSBP2-201ENST00000320672 FANCCQ00597 558 aa9.9□□□□□ -0.82
SSBP2-201ENST00000320672 TEX13AQ9BXU3 409 aaPredicted RBP9.9□□□□□ -0.82
SSBP2-201ENST00000320672 IMPG2Q9BZV3 1241 aa9.9□□□□□ -0.82
SSBP2-201ENST00000320672 LUC7L2Q9Y383 392 aaKnown RBP9.9□□□□□ -0.82
SSBP2-201ENST00000320672 ZMYND10O75800 440 aa9.9□□□□□ -0.82
SSBP2-201ENST00000320672 CD19P15391 556 aa9.9□□□□□ -0.82
SSBP2-201ENST00000320672 ADD1P35611 737 aaKnown RBP9.9□□□□□ -0.82
SSBP2-201ENST00000320672 TPD52P55327 224 aaPredicted RBP9.9□□□□□ -0.82
SSBP2-201ENST00000320672 SOS1Q07889 1333 aaPredicted RBP9.9□□□□□ -0.82
SSBP2-201ENST00000320672 ABCC11Q96J66 1382 aa9.9□□□□□ -0.82
SSBP2-201ENST00000320672 PFDN4Q9NQP4 134 aa9.9□□□□□ -0.82
SSBP2-201ENST00000320672 NOD1Q9Y239 953 aa9.9□□□□□ -0.82
SSBP2-201ENST00000320672 APBA3O96018 575 aa9.9□□□□□ -0.82
SSBP2-201ENST00000320672 HERC4Q5GLZ8 1057 aaPredicted RBP9.9□□□□□ -0.82
SSBP2-201ENST00000320672 SCYL2Q6P3W7 929 aa9.9□□□□□ -0.82
SSBP2-201ENST00000320672 CNBD1Q8NA66 436 aa9.9□□□□□ -0.82
SSBP2-201ENST00000320672 HAUS7Q99871 368 aa9.9□□□□□ -0.82
SSBP2-201ENST00000320672 GRAMD1CQ8IYS0 662 aa9.9□□□□□ -0.83
SSBP2-201ENST00000320672 CSGALNACT2Q8N6G5 542 aa9.9□□□□□ -0.83
SSBP2-201ENST00000320672 CNNM2Q9H8M5 875 aa9.9□□□□□ -0.83
SSBP2-201ENST00000320672 ST7Q9NRC1 585 aa9.9□□□□□ -0.83
SSBP2-201ENST00000320672 FNDC3AQ9Y2H6 1198 aaKnown RBP9.9□□□□□ -0.83
SSBP2-201ENST00000320672 BZW2Q9Y6E2 419 aaKnown RBP9.9□□□□□ -0.83
SSBP2-201ENST00000320672 KIF2AO00139 706 aaPredicted RBP9.89□□□□□ -0.83
SSBP2-201ENST00000320672 LARGE2Q8N3Y3 721 aa9.89□□□□□ -0.83
SSBP2-201ENST00000320672 TRIM35Q9UPQ4 493 aa9.89□□□□□ -0.83
SSBP2-201ENST00000320672 SULF1Q8IWU6 871 aa9.89□□□□□ -0.83
SSBP2-201ENST00000320672 SMYD4Q8IYR2 804 aaPredicted RBP9.89□□□□□ -0.83
SSBP2-201ENST00000320672 CALCOCO1Q9P1Z2 691 aa9.89□□□□□ -0.83
SSBP2-201ENST00000320672 GCNT3O95395 438 aa9.89□□□□□ -0.83
SSBP2-201ENST00000320672 SPOUT1Q5T280 376 aaKnown RBP9.89□□□□□ -0.83
SSBP2-201ENST00000320672 SPECC1LQ69YQ0 1117 aa9.89□□□□□ -0.83
SSBP2-201ENST00000320672 ZNF790Q6PG37 636 aa9.89□□□□□ -0.83
SSBP2-201ENST00000320672 C4orf50Q6ZRC1 276 aa9.89□□□□□ -0.83
SSBP2-201ENST00000320672 MAK16Q9BXY0 300 aaKnown RBP9.89□□□□□ -0.83
SSBP2-201ENST00000320672 MICALCLQ6ZW33 695 aa9.89□□□□□ -0.83
SSBP2-201ENST00000320672 EEPD1Q7L9B9 569 aa9.89□□□□□ -0.83
SSBP2-201ENST00000320672 RAB3IL1Q8TBN0 382 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms