RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 GOLGA8HP0CJ92 632 aa18.68■□□□□ 0.58
CLIP4-201ENST00000320081 AMPD3Q01432 767 aa18.68■□□□□ 0.58
CLIP4-201ENST00000320081 CUL4AQ13619 759 aa18.68■□□□□ 0.58
CLIP4-201ENST00000320081 CTR9Q6PD62 1173 aa18.68■□□□□ 0.58
CLIP4-201ENST00000320081 CTAGE6Q86UF2 777 aa18.68■□□□□ 0.58
CLIP4-201ENST00000320081 CTAGE4Q8IX94 777 aa18.68■□□□□ 0.58
CLIP4-201ENST00000320081 PUS7LQ9H0K6 701 aaKnown RBP18.68■□□□□ 0.58
CLIP4-201ENST00000320081 COPRSQ9NQ92 184 aa18.68■□□□□ 0.58
CLIP4-201ENST00000320081 HIBADHP31937 336 aaKnown RBP18.68■□□□□ 0.58
CLIP4-201ENST00000320081 ZYXQ15942 572 aaKnown RBP18.68■□□□□ 0.58
CLIP4-201ENST00000320081 DYMQ7RTS9 669 aa18.68■□□□□ 0.58
CLIP4-201ENST00000320081 SYCP3Q8IZU3 236 aa18.68■□□□□ 0.58
CLIP4-201ENST00000320081 PLCD4Q9BRC7 762 aa18.68■□□□□ 0.58
CLIP4-201ENST00000320081 RGS12O14924 1447 aa18.67■□□□□ 0.58
CLIP4-201ENST00000320081 PPP1R12BO60237 982 aaPredicted RBP18.67■□□□□ 0.58
CLIP4-201ENST00000320081 GRAMD1CQ8IYS0 662 aa18.67■□□□□ 0.58
CLIP4-201ENST00000320081 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.67■□□□□ 0.58
CLIP4-201ENST00000320081 RILPL1Q5EBL4 403 aa18.67■□□□□ 0.58
CLIP4-201ENST00000320081 C11orf57Q6ZUT1 292 aaPredicted RBP18.67■□□□□ 0.58
CLIP4-201ENST00000320081 KIAA1468Q9P260 1216 aa18.67■□□□□ 0.58
CLIP4-201ENST00000320081 ERLIN2O94905 339 aa18.67■□□□□ 0.58
CLIP4-201ENST00000320081 TEX11Q8IYF3 940 aa18.67■□□□□ 0.58
CLIP4-201ENST00000320081 CCDC42Q96M95 316 aa18.67■□□□□ 0.58
CLIP4-201ENST00000320081 LLPHQ9BRT6 129 aaKnown RBP18.67■□□□□ 0.58
CLIP4-201ENST00000320081 MAST3O60307 1309 aa18.67■□□□□ 0.58
CLIP4-201ENST00000320081 CYP2D7A0A087X1C5 515 aa18.66■□□□□ 0.58
CLIP4-201ENST00000320081 TCP10Q12799 353 aa18.66■□□□□ 0.58
CLIP4-201ENST00000320081 PTPROQ16827 1216 aa18.66■□□□□ 0.58
CLIP4-201ENST00000320081 DPCR1Q3MIW9 517 aa18.66■□□□□ 0.58
CLIP4-201ENST00000320081 IQCEQ6IPM2 695 aa18.66■□□□□ 0.58
CLIP4-201ENST00000320081 ZNF215Q9UL58 517 aaPredicted RBP18.66■□□□□ 0.58
CLIP4-201ENST00000320081 MAATS1Q7Z4T9 603 aa18.66■□□□□ 0.58
CLIP4-201ENST00000320081 FCHSD1Q86WN1 690 aa18.66■□□□□ 0.58
CLIP4-201ENST00000320081 FANCLQ9NW38 375 aa18.66■□□□□ 0.58
CLIP4-201ENST00000320081 HLA-DOAP06340 250 aa18.66■□□□□ 0.58
CLIP4-201ENST00000320081 ERCC6LQ2NKX8 1250 aa18.66■□□□□ 0.58
CLIP4-201ENST00000320081 MYRIPQ8NFW9 859 aa18.66■□□□□ 0.58
CLIP4-201ENST00000320081 TMEM87BQ96K49 555 aa18.66■□□□□ 0.58
CLIP4-201ENST00000320081 GBP3Q9H0R5 595 aa18.66■□□□□ 0.58
CLIP4-201ENST00000320081 MRVI1Q9Y6F6 885 aa18.66■□□□□ 0.58
CLIP4-201ENST00000320081 CDC42BPAQ5VT25 1732 aa18.66■□□□□ 0.58
CLIP4-201ENST00000320081 PLXNC1O60486 1568 aa18.66■□□□□ 0.58
CLIP4-201ENST00000320081 M0R2C6 588 aa18.66■□□□□ 0.58
CLIP4-201ENST00000320081 UFL1O94874 794 aa18.66■□□□□ 0.58
CLIP4-201ENST00000320081 DEXIO95424 95 aa18.66■□□□□ 0.58
CLIP4-201ENST00000320081 SF3A3Q12874 501 aaKnown RBP eCLIP18.66■□□□□ 0.58
CLIP4-201ENST00000320081 SMYD4Q8IYR2 804 aaPredicted RBP18.66■□□□□ 0.58
CLIP4-201ENST00000320081 FNBP4Q8N3X1 1017 aaPredicted RBP18.66■□□□□ 0.58
CLIP4-201ENST00000320081 VEZTQ9HBM0 779 aa18.66■□□□□ 0.58
CLIP4-201ENST00000320081 LUC7L2Q9Y383 392 aaKnown RBP18.66■□□□□ 0.58
CLIP4-201ENST00000320081 TFAP4Q01664 338 aa18.65■□□□□ 0.58
CLIP4-201ENST00000320081 DSCC1Q9BVC3 393 aa18.65■□□□□ 0.58
CLIP4-201ENST00000320081 CCDC94Q9BW85 323 aaPredicted RBP18.65■□□□□ 0.58
CLIP4-201ENST00000320081 GNAT2P19087 354 aa18.65■□□□□ 0.58
CLIP4-201ENST00000320081 CTSWP56202 376 aa18.65■□□□□ 0.58
CLIP4-201ENST00000320081 IFFO1Q0D2I5 559 aa18.65■□□□□ 0.58
CLIP4-201ENST00000320081 IFNL3Q8IZI9 196 aa18.65■□□□□ 0.58
CLIP4-201ENST00000320081 ZNF654Q8IZM8 581 aa18.65■□□□□ 0.58
CLIP4-201ENST00000320081 TGFBRAP1Q8WUH2 860 aa18.65■□□□□ 0.58
CLIP4-201ENST00000320081 ERBB3P21860 1342 aa18.65■□□□□ 0.58
CLIP4-201ENST00000320081 CUL5Q93034 780 aa18.65■□□□□ 0.58
CLIP4-201ENST00000320081 CYP27B1O15528 508 aa18.64■□□□□ 0.58
CLIP4-201ENST00000320081 TBC1D8BQ0IIM8 1120 aa18.64■□□□□ 0.58
CLIP4-201ENST00000320081 NR5A1Q13285 461 aa18.64■□□□□ 0.58
CLIP4-201ENST00000320081 RGS22Q8NE09 1264 aa18.64■□□□□ 0.58
CLIP4-201ENST00000320081 NSUN7Q8NE18 718 aaKnown RBP18.64■□□□□ 0.58
CLIP4-201ENST00000320081 GPKOWQ92917 476 aaPredicted RBP eCLIP18.64■□□□□ 0.58
CLIP4-201ENST00000320081 CTAGE9A4FU28 777 aa18.64■□□□□ 0.57
CLIP4-201ENST00000320081 SF3B2Q13435 895 aaKnown RBP18.64■□□□□ 0.57
CLIP4-201ENST00000320081 CACTINQ8WUQ7 758 aaKnown RBP18.64■□□□□ 0.57
CLIP4-201ENST00000320081 TTC38Q5R3I4 469 aa18.64■□□□□ 0.57
CLIP4-201ENST00000320081 CCDC122Q5T0U0 273 aa18.64■□□□□ 0.57
CLIP4-201ENST00000320081 FBXO18Q8NFZ0 1043 aa18.64■□□□□ 0.57
CLIP4-201ENST00000320081 SLF1Q9BQI6 1058 aa18.64■□□□□ 0.57
CLIP4-201ENST00000320081 PFKFB2O60825 505 aa18.63■□□□□ 0.57
CLIP4-201ENST00000320081 KRT9P35527 623 aa18.63■□□□□ 0.57
CLIP4-201ENST00000320081 RNF187Q5TA31 235 aaPredicted RBP18.63■□□□□ 0.57
CLIP4-201ENST00000320081 MYO6Q9UM54 1294 aa18.63■□□□□ 0.57
CLIP4-201ENST00000320081 CLTCL1P53675 1640 aa18.63■□□□□ 0.57
CLIP4-201ENST00000320081 KIF24Q5T7B8 1368 aa18.63■□□□□ 0.57
CLIP4-201ENST00000320081 GSTTP1A0A1W2PQM5 241 aa18.63■□□□□ 0.57
CLIP4-201ENST00000320081 PPP2R3AQ06190 1150 aa18.63■□□□□ 0.57
CLIP4-201ENST00000320081 POSTNQ15063 836 aa18.63■□□□□ 0.57
CLIP4-201ENST00000320081 NECTIN1Q15223 517 aa18.63■□□□□ 0.57
CLIP4-201ENST00000320081 RASGRP4Q8TDF6 673 aa18.63■□□□□ 0.57
CLIP4-201ENST00000320081 CNKSR2Q8WXI2 1034 aa18.63■□□□□ 0.57
CLIP4-201ENST00000320081 CCNL1Q9UK58 526 aaPredicted RBP18.63■□□□□ 0.57
CLIP4-201ENST00000320081 GOLGA6L9A6NEM1 432 aa18.63■□□□□ 0.57
CLIP4-201ENST00000320081 AKR1B15C9JRZ8 316 aaPredicted RBP18.63■□□□□ 0.57
CLIP4-201ENST00000320081 SMIM5Q71RC9 77 aa18.63■□□□□ 0.57
CLIP4-201ENST00000320081 CCDC87Q9NVE4 849 aa18.63■□□□□ 0.57
CLIP4-201ENST00000320081 PCDHA5Q9Y5H7 936 aa18.63■□□□□ 0.57
CLIP4-201ENST00000320081 PDE4DQ08499 809 aa18.63■□□□□ 0.57
CLIP4-201ENST00000320081 KRT79Q5XKE5 535 aa18.63■□□□□ 0.57
CLIP4-201ENST00000320081 MAEAQ7L5Y9 396 aa18.63■□□□□ 0.57
CLIP4-201ENST00000320081 RMND1Q9NWS8 449 aa18.63■□□□□ 0.57
CLIP4-201ENST00000320081 VPS18Q9P253 973 aa18.63■□□□□ 0.57
CLIP4-201ENST00000320081 RSPH14Q9UHP6 348 aa18.63■□□□□ 0.57
CLIP4-201ENST00000320081 CCNT1O60563 726 aaKnown RBP18.62■□□□□ 0.57
CLIP4-201ENST00000320081 ADALQ6DHV7 355 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 208.7 ms