RNA–Protein interactions for RNA: ENST00000318524.6

NFX1-201, Transcript of nuclear transcription factor, X-box binding 1, humanhuman

TSL 1 (best) BASIC

Gene NFX1, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFX1-201ENST00000318524 TNRC6CQ9HCJ0 1690 aaKnown RBP7.56□□□□□ -1.2
NFX1-201ENST00000318524 H3BQV1 296 aa7.56□□□□□ -1.2
NFX1-201ENST00000318524 FMR1Q06787 632 aaKnown RBP eCLIP7.56□□□□□ -1.2
NFX1-201ENST00000318524 ZRSR1Q15695 479 aaKnown RBP7.56□□□□□ -1.2
NFX1-201ENST00000318524 EAPPQ56P03 285 aaPredicted RBP7.56□□□□□ -1.2
NFX1-201ENST00000318524 IFFO2Q5TF58 517 aa7.56□□□□□ -1.2
NFX1-201ENST00000318524 PRMT6Q96LA8 375 aaPredicted RBP7.56□□□□□ -1.2
NFX1-201ENST00000318524 RBM27Q9P2N5 1060 aaKnown RBP7.56□□□□□ -1.2
NFX1-201ENST00000318524 NUP188Q5SRE5 1749 aa7.56□□□□□ -1.2
NFX1-201ENST00000318524 ATP2B4P23634 1241 aa7.56□□□□□ -1.2
NFX1-201ENST00000318524 CRY2Q49AN0 593 aa7.56□□□□□ -1.2
NFX1-201ENST00000318524 ERCC4Q92889 916 aaPredicted RBP7.56□□□□□ -1.2
NFX1-201ENST00000318524 CNKSR1Q969H4 720 aa7.56□□□□□ -1.2
NFX1-201ENST00000318524 NBPF3Q9H094 633 aa7.56□□□□□ -1.2
NFX1-201ENST00000318524 DDX4Q9NQI0 724 aaKnown RBP7.56□□□□□ -1.2
NFX1-201ENST00000318524 BRPF3Q9ULD4 1205 aa7.56□□□□□ -1.2
NFX1-201ENST00000318524 WNK3Q9BYP7 1800 aa7.56□□□□□ -1.2
NFX1-201ENST00000318524 MYH13Q9UKX3 1938 aa7.55□□□□□ -1.2
NFX1-201ENST00000318524 FRMPD2Q68DX3 1309 aaPredicted RBP7.55□□□□□ -1.2
NFX1-201ENST00000318524 A0A087WWV3 80 aa7.55□□□□□ -1.2
NFX1-201ENST00000318524 RPS6KB1P23443 525 aa7.55□□□□□ -1.2
NFX1-201ENST00000318524 PPARAQ07869 468 aa7.55□□□□□ -1.2
NFX1-201ENST00000318524 GNL2Q13823 731 aaKnown RBP7.55□□□□□ -1.2
NFX1-201ENST00000318524 LARP1BQ659C4 914 aaKnown RBP7.55□□□□□ -1.2
NFX1-201ENST00000318524 ZSCAN25Q6NSZ9 544 aa7.55□□□□□ -1.2
NFX1-201ENST00000318524 TRIM34Q9BYJ4 488 aa7.55□□□□□ -1.2
NFX1-201ENST00000318524 LIMCH1Q9UPQ0 1083 aa7.55□□□□□ -1.2
NFX1-201ENST00000318524 DAGLAQ9Y4D2 1042 aa7.55□□□□□ -1.2
NFX1-201ENST00000318524 CICQ96RK0 1608 aaPredicted RBP7.55□□□□□ -1.2
NFX1-201ENST00000318524 PAPPAQ13219 1627 aa7.55□□□□□ -1.2
NFX1-201ENST00000318524 DDNO94850 711 aaPredicted RBP7.55□□□□□ -1.2
NFX1-201ENST00000318524 TFAP4Q01664 338 aa7.55□□□□□ -1.2
NFX1-201ENST00000318524 MAPK8IP2Q13387 824 aaPredicted RBP7.55□□□□□ -1.2
NFX1-201ENST00000318524 TOB2Q14106 344 aaPredicted RBP7.55□□□□□ -1.2
NFX1-201ENST00000318524 PANK2Q9BZ23 570 aa7.55□□□□□ -1.2
NFX1-201ENST00000318524 UBA5Q9GZZ9 404 aa7.55□□□□□ -1.2
NFX1-201ENST00000318524 MTFR1LQ9H019 292 aa7.55□□□□□ -1.2
NFX1-201ENST00000318524 GPR108Q9NPR9 543 aa7.55□□□□□ -1.2
NFX1-201ENST00000318524 TCRBV5S4A2TA0A5A2 114 aa7.55□□□□□ -1.2
NFX1-201ENST00000318524 SP8Q8IXZ3 490 aa7.55□□□□□ -1.2
NFX1-201ENST00000318524 NIM1KQ8IY84 436 aa7.55□□□□□ -1.2
NFX1-201ENST00000318524 SLC26A6Q9BXS9 759 aa7.55□□□□□ -1.2
NFX1-201ENST00000318524 CRNKL1Q9BZJ0 848 aaKnown RBP7.55□□□□□ -1.2
NFX1-201ENST00000318524 TMEM39BQ9GZU3 492 aa7.55□□□□□ -1.2
NFX1-201ENST00000318524 DCP1AQ9NPI6 582 aaPredicted RBP7.55□□□□□ -1.2
NFX1-201ENST00000318524 KCNJ14Q9UNX9 436 aa7.55□□□□□ -1.2
NFX1-201ENST00000318524 LEMD3Q9Y2U8 911 aa7.55□□□□□ -1.2
NFX1-201ENST00000318524 BAZ2AQ9UIF9 1905 aaKnown RBP7.54□□□□□ -1.2
NFX1-201ENST00000318524 CCDC69A6NI79 296 aa7.54□□□□□ -1.2
NFX1-201ENST00000318524 VEGFAP15692 232 aaPredicted RBP7.54□□□□□ -1.2
NFX1-201ENST00000318524 SLC16A2P36021 539 aa7.54□□□□□ -1.2
NFX1-201ENST00000318524 SCRN1Q12765 414 aa7.54□□□□□ -1.2
NFX1-201ENST00000318524 CDC37L1Q7L3B6 337 aa7.54□□□□□ -1.2
NFX1-201ENST00000318524 OGFOD1Q8N543 542 aa7.54□□□□□ -1.2
NFX1-201ENST00000318524 NCOA7Q8NI08 942 aa7.54□□□□□ -1.2
NFX1-201ENST00000318524 NUP88Q99567 741 aaPredicted RBP7.54□□□□□ -1.2
NFX1-201ENST00000318524 TAOK3Q9H2K8 898 aa7.54□□□□□ -1.2
NFX1-201ENST00000318524 SPON1Q9HCB6 807 aa7.54□□□□□ -1.2
NFX1-201ENST00000318524 HELLSQ9NRZ9 838 aa7.54□□□□□ -1.2
NFX1-201ENST00000318524 RNF181Q9P0P0 153 aa7.54□□□□□ -1.2
NFX1-201ENST00000318524 NHSQ6T4R5 1651 aa7.54□□□□□ -1.2
NFX1-201ENST00000318524 PATL2C9JE40 543 aaKnown RBP7.54□□□□□ -1.2
NFX1-201ENST00000318524 ANTXR2P58335 489 aa7.54□□□□□ -1.2
NFX1-201ENST00000318524 CXCL9Q07325 125 aa7.54□□□□□ -1.2
NFX1-201ENST00000318524 LRRFIP1Q32MZ4 808 aaKnown RBP7.54□□□□□ -1.2
NFX1-201ENST00000318524 TDRD7Q8NHU6 1098 aaKnown RBP7.54□□□□□ -1.2
NFX1-201ENST00000318524 GPCPD1Q9NPB8 672 aa7.54□□□□□ -1.2
NFX1-201ENST00000318524 CNPY2Q9Y2B0 182 aa7.54□□□□□ -1.2
NFX1-201ENST00000318524 MED23Q9ULK4 1368 aa7.54□□□□□ -1.2
NFX1-201ENST00000318524 SLX4Q8IY92 1834 aa7.54□□□□□ -1.2
NFX1-201ENST00000318524 TSPY3P0CV98 308 aa7.53□□□□□ -1.2
NFX1-201ENST00000318524 TSPY8P0CW00 308 aa7.53□□□□□ -1.2
NFX1-201ENST00000318524 KCNA3P22001 575 aa7.53□□□□□ -1.2
NFX1-201ENST00000318524 PSMA5P28066 241 aa7.53□□□□□ -1.2
NFX1-201ENST00000318524 CRKP46108 304 aa7.53□□□□□ -1.2
NFX1-201ENST00000318524 ST3GAL1Q11201 340 aa7.53□□□□□ -1.2
NFX1-201ENST00000318524 CFAP100Q494V2 611 aa7.53□□□□□ -1.2
NFX1-201ENST00000318524 CTR9Q6PD62 1173 aa7.53□□□□□ -1.2
NFX1-201ENST00000318524 WDR66Q8TBY9 1149 aa7.53□□□□□ -1.2
NFX1-201ENST00000318524 CLEC11AQ9Y240 323 aa7.53□□□□□ -1.2
NFX1-201ENST00000318524 MYH3P11055 1940 aa7.53□□□□□ -1.2
NFX1-201ENST00000318524 ERICH2A1L162 156 aa7.53□□□□□ -1.2
NFX1-201ENST00000318524 PEX10O60683 326 aa7.53□□□□□ -1.2
NFX1-201ENST00000318524 ZFYP08048 801 aaPredicted RBP7.53□□□□□ -1.2
NFX1-201ENST00000318524 DNM1Q05193 864 aaKnown RBP7.53□□□□□ -1.2
NFX1-201ENST00000318524 CCDC93Q567U6 631 aa7.53□□□□□ -1.2
NFX1-201ENST00000318524 DHX32Q7L7V1 743 aaKnown RBP7.53□□□□□ -1.2
NFX1-201ENST00000318524 ZNF444Q8N0Y2 327 aaPredicted RBP7.53□□□□□ -1.2
NFX1-201ENST00000318524 CRAMP1Q96RY5 1269 aa7.53□□□□□ -1.2
NFX1-201ENST00000318524 RIOK1Q9BRS2 568 aaKnown RBP7.53□□□□□ -1.2
NFX1-201ENST00000318524 TNKSO95271 1327 aa7.53□□□□□ -1.2
NFX1-201ENST00000318524 DDTLA6NHG4 134 aaPredicted RBP7.53□□□□□ -1.2
NFX1-201ENST00000318524 GOLGA8AA7E2F4 631 aa7.53□□□□□ -1.2
NFX1-201ENST00000318524 BAG3O95817 575 aa7.53□□□□□ -1.2
NFX1-201ENST00000318524 SYT1P21579 422 aa7.53□□□□□ -1.2
NFX1-201ENST00000318524 GUCY1A2P33402 732 aa7.53□□□□□ -1.2
NFX1-201ENST00000318524 MCM5P33992 734 aa7.53□□□□□ -1.2
NFX1-201ENST00000318524 SPECC1Q5M775 1068 aa7.53□□□□□ -1.2
NFX1-201ENST00000318524 GPKOWQ92917 476 aaPredicted RBP eCLIP7.53□□□□□ -1.2
NFX1-201ENST00000318524 SLC12A7Q9Y666 1083 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms