RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 TUBE1Q9UJT0 475 aa11.05□□□□□ -0.64
PTPRA-202ENST00000318266 HPS5Q9UPZ3 1129 aa11.05□□□□□ -0.64
PTPRA-202ENST00000318266 UTYO14607 1347 aa11.05□□□□□ -0.64
PTPRA-202ENST00000318266 SH3TC1Q8TE82 1336 aa11.05□□□□□ -0.64
PTPRA-202ENST00000318266 NOP2P46087 812 aaKnown RBP11.05□□□□□ -0.64
PTPRA-202ENST00000318266 OSBP2Q969R2 916 aa11.05□□□□□ -0.64
PTPRA-202ENST00000318266 ZNF594Q96JF6 807 aaPredicted RBP11.05□□□□□ -0.64
PTPRA-202ENST00000318266 GDAP1L1Q96MZ0 367 aa11.05□□□□□ -0.64
PTPRA-202ENST00000318266 ALG1Q9BT22 464 aa11.05□□□□□ -0.64
PTPRA-202ENST00000318266 STX10O60499 249 aa11.05□□□□□ -0.64
PTPRA-202ENST00000318266 CUTAO60888 179 aa11.05□□□□□ -0.64
PTPRA-202ENST00000318266 IFIT1P09914 478 aaKnown RBP11.05□□□□□ -0.64
PTPRA-202ENST00000318266 ZMYM1Q5SVZ6 1142 aa11.05□□□□□ -0.64
PTPRA-202ENST00000318266 BEND6Q5SZJ8 279 aaPredicted RBP11.05□□□□□ -0.64
PTPRA-202ENST00000318266 CCDC102BQ68D86 513 aa11.05□□□□□ -0.64
PTPRA-202ENST00000318266 RALYLQ86SE5 291 aaKnown RBP11.05□□□□□ -0.64
PTPRA-202ENST00000318266 FCHSD1Q86WN1 690 aa11.05□□□□□ -0.64
PTPRA-202ENST00000318266 RGS22Q8NE09 1264 aa11.05□□□□□ -0.64
PTPRA-202ENST00000318266 KCNH3Q9ULD8 1083 aa11.05□□□□□ -0.64
PTPRA-202ENST00000318266 ABCC6O95255 1503 aa11.04□□□□□ -0.64
PTPRA-202ENST00000318266 COBLO75128 1261 aa11.04□□□□□ -0.64
PTPRA-202ENST00000318266 ABL1P00519 1130 aa11.04□□□□□ -0.64
PTPRA-202ENST00000318266 CCDC175P0C221 793 aa11.04□□□□□ -0.64
PTPRA-202ENST00000318266 STX17P56962 302 aa11.04□□□□□ -0.64
PTPRA-202ENST00000318266 HDXQ7Z353 690 aa11.04□□□□□ -0.64
PTPRA-202ENST00000318266 SRGAP1Q7Z6B7 1085 aa11.04□□□□□ -0.64
PTPRA-202ENST00000318266 MICU3Q86XE3 530 aa11.04□□□□□ -0.64
PTPRA-202ENST00000318266 IP6K1Q92551 441 aa11.04□□□□□ -0.64
PTPRA-202ENST00000318266 CDC5LQ99459 802 aaKnown RBP11.04□□□□□ -0.64
PTPRA-202ENST00000318266 MYL10Q9BUA6 226 aa11.04□□□□□ -0.64
PTPRA-202ENST00000318266 GOLGA6L9A6NEM1 432 aa11.04□□□□□ -0.64
PTPRA-202ENST00000318266 TEX33O43247 280 aa11.04□□□□□ -0.64
PTPRA-202ENST00000318266 PRR29P0C7W0 189 aa11.04□□□□□ -0.64
PTPRA-202ENST00000318266 VSNL1P62760 191 aa11.04□□□□□ -0.64
PTPRA-202ENST00000318266 HSP90B2PQ58FF3 399 aa11.04□□□□□ -0.64
PTPRA-202ENST00000318266 ANKRD13DQ6ZTN6 518 aa11.04□□□□□ -0.64
PTPRA-202ENST00000318266 PACS2Q86VP3 889 aa11.04□□□□□ -0.64
PTPRA-202ENST00000318266 DRC1Q96MC2 740 aa11.04□□□□□ -0.64
PTPRA-202ENST00000318266 HELLSQ9NRZ9 838 aa11.04□□□□□ -0.64
PTPRA-202ENST00000318266 PXDNQ92626 1479 aa11.03□□□□□ -0.64
PTPRA-202ENST00000318266 PALLDQ8WX93 1383 aa11.03□□□□□ -0.64
PTPRA-202ENST00000318266 MAP2K7O14733 419 aa11.03□□□□□ -0.64
PTPRA-202ENST00000318266 GRIN1Q05586 938 aa11.03□□□□□ -0.64
PTPRA-202ENST00000318266 BRD3Q15059 726 aa11.03□□□□□ -0.64
PTPRA-202ENST00000318266 KRT40Q6A162 431 aa11.03□□□□□ -0.64
PTPRA-202ENST00000318266 RAD9BQ6WBX8 426 aa11.03□□□□□ -0.64
PTPRA-202ENST00000318266 GOLGA6L1Q8N7Z2 621 aa11.03□□□□□ -0.64
PTPRA-202ENST00000318266 CCDC85AQ96PX6 553 aaPredicted RBP11.03□□□□□ -0.64
PTPRA-202ENST00000318266 METTL22Q9BUU2 404 aaPredicted RBP11.03□□□□□ -0.64
PTPRA-202ENST00000318266 TEX13AQ9BXU3 409 aaPredicted RBP11.03□□□□□ -0.64
PTPRA-202ENST00000318266 RABEP2Q9H5N1 569 aa11.03□□□□□ -0.64
PTPRA-202ENST00000318266 AKAP2Q9Y2D5 859 aa11.03□□□□□ -0.64
PTPRA-202ENST00000318266 SLIT2O94813 1529 aa11.03□□□□□ -0.64
PTPRA-202ENST00000318266 EIF3CLB5ME19 914 aaKnown RBP11.03□□□□□ -0.64
PTPRA-202ENST00000318266 KIF5CO60282 957 aa11.03□□□□□ -0.64
PTPRA-202ENST00000318266 PAXIP1Q6ZW49 1069 aaPredicted RBP11.03□□□□□ -0.64
PTPRA-202ENST00000318266 CCDC82Q8N4S0 544 aa11.03□□□□□ -0.64
PTPRA-202ENST00000318266 EIF3CQ99613 913 aaKnown RBP11.03□□□□□ -0.64
PTPRA-202ENST00000318266 EFCC1Q9HA90 598 aa11.03□□□□□ -0.64
PTPRA-202ENST00000318266 PIK3C2AO00443 1686 aa11.03□□□□□ -0.64
PTPRA-202ENST00000318266 RNF113AO15541 343 aaKnown RBP11.03□□□□□ -0.64
PTPRA-202ENST00000318266 FGAP02671 866 aa11.03□□□□□ -0.64
PTPRA-202ENST00000318266 TBX2Q13207 712 aaPredicted RBP11.03□□□□□ -0.64
PTPRA-202ENST00000318266 IMMTQ16891 758 aaKnown RBP11.03□□□□□ -0.64
PTPRA-202ENST00000318266 TTC31Q49AM3 519 aaPredicted RBP11.03□□□□□ -0.64
PTPRA-202ENST00000318266 LRRC24Q50LG9 513 aa11.03□□□□□ -0.64
PTPRA-202ENST00000318266 RAI14Q9P0K7 980 aa11.03□□□□□ -0.64
PTPRA-202ENST00000318266 EIF3JO75822 258 aaKnown RBP11.02□□□□□ -0.64
PTPRA-202ENST00000318266 ANTXR2P58335 489 aa11.02□□□□□ -0.64
PTPRA-202ENST00000318266 SLC35F6Q8N357 371 aa11.02□□□□□ -0.64
PTPRA-202ENST00000318266 JMYQ8N9B5 988 aa11.02□□□□□ -0.64
PTPRA-202ENST00000318266 ACRBPQ8NEB7 543 aa11.02□□□□□ -0.64
PTPRA-202ENST00000318266 NKX2-3Q8TAU0 364 aa11.02□□□□□ -0.64
PTPRA-202ENST00000318266 HINFPQ9BQA5 517 aa11.02□□□□□ -0.64
PTPRA-202ENST00000318266 SENP2Q9HC62 589 aa11.02□□□□□ -0.64
PTPRA-202ENST00000318266 MAN1B1Q9UKM7 699 aa11.02□□□□□ -0.64
PTPRA-202ENST00000318266 POLR2DO15514 142 aaKnown RBP11.02□□□□□ -0.65
PTPRA-202ENST00000318266 CASP8Q14790 479 aa11.02□□□□□ -0.65
PTPRA-202ENST00000318266 SART3Q15020 963 aaKnown RBP11.02□□□□□ -0.65
PTPRA-202ENST00000318266 E2F4Q16254 413 aa11.02□□□□□ -0.65
PTPRA-202ENST00000318266 NOM1Q5C9Z4 860 aaKnown RBP11.02□□□□□ -0.65
PTPRA-202ENST00000318266 PI16Q6UXB8 463 aa11.02□□□□□ -0.65
PTPRA-202ENST00000318266 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.02□□□□□ -0.65
PTPRA-202ENST00000318266 FAM204AQ9H8W3 233 aa11.02□□□□□ -0.65
PTPRA-202ENST00000318266 HPSEQ9Y251 543 aa11.02□□□□□ -0.65
PTPRA-202ENST00000318266 AKR1B15C9JRZ8 316 aaPredicted RBP11.01□□□□□ -0.65
PTPRA-202ENST00000318266 ERLIN1O75477 346 aa11.01□□□□□ -0.65
PTPRA-202ENST00000318266 IVLP07476 585 aa11.01□□□□□ -0.65
PTPRA-202ENST00000318266 CASP1P29466 404 aa11.01□□□□□ -0.65
PTPRA-202ENST00000318266 AKAP17AQ02040 695 aaKnown RBP11.01□□□□□ -0.65
PTPRA-202ENST00000318266 RBL2Q08999 1139 aa11.01□□□□□ -0.65
PTPRA-202ENST00000318266 NOA1Q8NC60 698 aaKnown RBP11.01□□□□□ -0.65
PTPRA-202ENST00000318266 PSD3Q9NYI0 1048 aa11.01□□□□□ -0.65
PTPRA-202ENST00000318266 SERTAD1Q9UHV2 236 aa11.01□□□□□ -0.65
PTPRA-202ENST00000318266 CDC23Q9UJX2 597 aa11.01□□□□□ -0.65
PTPRA-202ENST00000318266 L1RE1Q9UN81 338 aa11.01□□□□□ -0.65
PTPRA-202ENST00000318266 A0A1B0GUL7 405 aa11.01□□□□□ -0.65
PTPRA-202ENST00000318266 PTPAQ15257 358 aa11.01□□□□□ -0.65
PTPRA-202ENST00000318266 TTC39AQ5SRH9 613 aa11.01□□□□□ -0.65
PTPRA-202ENST00000318266 ICE2Q659A1 982 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms