RNA–Protein interactions for RNA: ENST00000316534.8

NPHP1-201, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-201ENST00000316534 LARP1BQ659C4 914 aaKnown RBP8.43□□□□□ -1.06
NPHP1-201ENST00000316534 RPGRQ92834 1020 aaKnown RBP8.43□□□□□ -1.06
NPHP1-201ENST00000316534 MASTLQ96GX5 879 aa8.43□□□□□ -1.06
NPHP1-201ENST00000316534 GPHNQ9NQX3 736 aaPredicted RBP8.43□□□□□ -1.06
NPHP1-201ENST00000316534 FMNL1O95466 1100 aaPredicted RBP8.43□□□□□ -1.06
NPHP1-201ENST00000316534 IFNAR1P17181 557 aa8.43□□□□□ -1.06
NPHP1-201ENST00000316534 U2AF2P26368 475 aaKnown RBP eCLIP8.43□□□□□ -1.06
NPHP1-201ENST00000316534 ALDH1B1P30837 517 aa8.43□□□□□ -1.06
NPHP1-201ENST00000316534 SLC15A2Q16348 729 aa8.43□□□□□ -1.06
NPHP1-201ENST00000316534 L1TD1Q5T7N2 865 aaKnown RBP8.43□□□□□ -1.06
NPHP1-201ENST00000316534 TBC1D22AQ8WUA7 517 aa8.43□□□□□ -1.06
NPHP1-201ENST00000316534 NAPBQ9H115 298 aa8.43□□□□□ -1.06
NPHP1-201ENST00000316534 GGA1Q9UJY5 639 aa8.43□□□□□ -1.06
NPHP1-201ENST00000316534 LOC285556D6RIA3 1793 aa8.43□□□□□ -1.06
NPHP1-201ENST00000316534 DHX16O60231 1041 aaKnown RBP8.42□□□□□ -1.06
NPHP1-201ENST00000316534 RANBP6O60518 1105 aaKnown RBP8.42□□□□□ -1.06
NPHP1-201ENST00000316534 APBA3O96018 575 aa8.42□□□□□ -1.06
NPHP1-201ENST00000316534 NASPP49321 788 aaPredicted RBP8.42□□□□□ -1.06
NPHP1-201ENST00000316534 GRIK5Q16478 980 aa8.42□□□□□ -1.06
NPHP1-201ENST00000316534 CSPP1Q1MSJ5 1256 aa8.42□□□□□ -1.06
NPHP1-201ENST00000316534 C12orf60Q5U649 245 aa8.42□□□□□ -1.06
NPHP1-201ENST00000316534 SENP2Q9HC62 589 aa8.42□□□□□ -1.06
NPHP1-201ENST00000316534 LRP2BPQ9P2M1 347 aa8.42□□□□□ -1.06
NPHP1-201ENST00000316534 CNPY2Q9Y2B0 182 aa8.42□□□□□ -1.06
NPHP1-201ENST00000316534 MYH4Q9Y623 1939 aa8.42□□□□□ -1.06
NPHP1-201ENST00000316534 GADD45BO75293 160 aaPredicted RBP8.42□□□□□ -1.06
NPHP1-201ENST00000316534 PRPF40AO75400 957 aaKnown RBP8.42□□□□□ -1.06
NPHP1-201ENST00000316534 PRDX5P30044 214 aa8.42□□□□□ -1.06
NPHP1-201ENST00000316534 CDC27P30260 824 aa8.42□□□□□ -1.06
NPHP1-201ENST00000316534 MRE11P49959 708 aa8.42□□□□□ -1.06
NPHP1-201ENST00000316534 DYNLL1P63167 89 aaKnown RBP8.42□□□□□ -1.06
NPHP1-201ENST00000316534 ANO8Q9HCE9 1232 aaPredicted RBP8.42□□□□□ -1.06
NPHP1-201ENST00000316534 LRSAM1Q6UWE0 723 aa8.42□□□□□ -1.06
NPHP1-201ENST00000316534 TTC6Q86TZ1 520 aa8.42□□□□□ -1.06
NPHP1-201ENST00000316534 FBXO18Q8NFZ0 1043 aa8.42□□□□□ -1.06
NPHP1-201ENST00000316534 VPS33BQ9H267 617 aa8.42□□□□□ -1.06
NPHP1-201ENST00000316534 KLF18A0A0U1RQI7 1052 aa8.41□□□□□ -1.06
NPHP1-201ENST00000316534 GTF2E1P29083 439 aaPredicted RBP8.41□□□□□ -1.06
NPHP1-201ENST00000316534 HAND2P61296 217 aa8.41□□□□□ -1.06
NPHP1-201ENST00000316534 CTDSPL2Q05D32 466 aa8.41□□□□□ -1.06
NPHP1-201ENST00000316534 MFSD6Q6ZSS7 791 aa8.41□□□□□ -1.06
NPHP1-201ENST00000316534 METTL16Q86W50 562 aaKnown RBP8.41□□□□□ -1.06
NPHP1-201ENST00000316534 CHAMP1Q96JM3 812 aa8.41□□□□□ -1.06
NPHP1-201ENST00000316534 SCAND2PQ9GZW5 306 aaPredicted RBP8.41□□□□□ -1.06
NPHP1-201ENST00000316534 RTEL1Q9NZ71 1219 aa8.41□□□□□ -1.06
NPHP1-201ENST00000316534 TFCP2L1Q9NZI6 479 aa8.41□□□□□ -1.06
NPHP1-201ENST00000316534 IGKV6D-41A0A0C4DH26 115 aa8.41□□□□□ -1.06
NPHP1-201ENST00000316534 B4E1Z4 1266 aa8.41□□□□□ -1.06
NPHP1-201ENST00000316534 DDAH1O94760 285 aa8.41□□□□□ -1.06
NPHP1-201ENST00000316534 LETM1O95202 739 aaPredicted RBP8.41□□□□□ -1.06
NPHP1-201ENST00000316534 XRCC6P12956 609 aaKnown RBP eCLIP8.41□□□□□ -1.06
NPHP1-201ENST00000316534 NOL8Q76FK4 1167 aaKnown RBP8.41□□□□□ -1.06
NPHP1-201ENST00000316534 LRRC2Q9BYS8 371 aa8.41□□□□□ -1.06
NPHP1-201ENST00000316534 KIF3AQ9Y496 699 aa8.41□□□□□ -1.06
NPHP1-201ENST00000316534 ATAD5Q96QE3 1844 aa8.41□□□□□ -1.06
NPHP1-201ENST00000316534 HDLBPQ00341 1268 aaKnown RBP8.41□□□□□ -1.06
NPHP1-201ENST00000316534 DNM1Q05193 864 aaKnown RBP8.41□□□□□ -1.06
NPHP1-201ENST00000316534 GABPAQ06546 454 aa8.41□□□□□ -1.06
NPHP1-201ENST00000316534 RCSD1Q6JBY9 416 aa8.41□□□□□ -1.06
NPHP1-201ENST00000316534 BRAPQ7Z569 592 aa8.41□□□□□ -1.06
NPHP1-201ENST00000316534 RALYLQ86SE5 291 aaKnown RBP8.41□□□□□ -1.06
NPHP1-201ENST00000316534 ELOA2Q8IYF1 753 aaPredicted RBP8.41□□□□□ -1.06
NPHP1-201ENST00000316534 LEO1Q8WVC0 666 aaPredicted RBP8.41□□□□□ -1.06
NPHP1-201ENST00000316534 PPP1R9BQ96SB3 815 aa8.41□□□□□ -1.06
NPHP1-201ENST00000316534 CRNKL1Q9BZJ0 848 aaKnown RBP8.41□□□□□ -1.06
NPHP1-201ENST00000316534 POLR3EQ9NVU0 708 aa8.41□□□□□ -1.06
NPHP1-201ENST00000316534 TROAPQ12815 778 aa8.4□□□□□ -1.06
NPHP1-201ENST00000316534 SHISA4Q96DD7 197 aa8.4□□□□□ -1.06
NPHP1-201ENST00000316534 PARP14Q460N5 1801 aa8.4□□□□□ -1.06
NPHP1-201ENST00000316534 CDKL5O76039 1030 aa8.4□□□□□ -1.06
NPHP1-201ENST00000316534 C16orf86Q6ZW13 317 aa8.4□□□□□ -1.06
NPHP1-201ENST00000316534 PDLIM2Q96JY6 352 aa8.4□□□□□ -1.06
NPHP1-201ENST00000316534 ZSCAN10Q96SZ4 725 aaPredicted RBP8.4□□□□□ -1.06
NPHP1-201ENST00000316534 DDX49Q9Y6V7 483 aaKnown RBP8.4□□□□□ -1.06
NPHP1-201ENST00000316534 LDHBP07195 334 aaKnown RBP8.4□□□□□ -1.07
NPHP1-201ENST00000316534 KRT85P78386 507 aa8.4□□□□□ -1.07
NPHP1-201ENST00000316534 KIF23Q02241 960 aaPredicted RBP8.4□□□□□ -1.07
NPHP1-201ENST00000316534 TRDNQ13061 729 aa8.4□□□□□ -1.07
NPHP1-201ENST00000316534 HHIPL2Q6UWX4 724 aa8.4□□□□□ -1.07
NPHP1-201ENST00000316534 ENAHQ8N8S7 591 aaPredicted RBP8.4□□□□□ -1.07
NPHP1-201ENST00000316534 ENGASEQ8NFI3 743 aa8.4□□□□□ -1.07
NPHP1-201ENST00000316534 SDR42E1Q8WUS8 393 aa8.4□□□□□ -1.07
NPHP1-201ENST00000316534 PGBD1Q96JS3 809 aa8.4□□□□□ -1.07
NPHP1-201ENST00000316534 RAI14Q9P0K7 980 aa8.4□□□□□ -1.07
NPHP1-201ENST00000316534 RBBP6Q7Z6E9 1792 aaKnown RBP8.39□□□□□ -1.07
NPHP1-201ENST00000316534 CC2D2BQ6DHV5 1058 aa8.39□□□□□ -1.07
NPHP1-201ENST00000316534 CCDC24Q8N4L8 307 aa8.39□□□□□ -1.07
NPHP1-201ENST00000316534 MIGA1Q8NAN2 632 aa8.39□□□□□ -1.07
NPHP1-201ENST00000316534 ESR2Q92731 530 aa8.39□□□□□ -1.07
NPHP1-201ENST00000316534 TNFRSF25Q93038 417 aa8.39□□□□□ -1.07
NPHP1-201ENST00000316534 GRPEL1Q9HAV7 217 aa8.39□□□□□ -1.07
NPHP1-201ENST00000316534 NCOA5Q9HCD5 579 aaKnown RBP8.39□□□□□ -1.07
NPHP1-201ENST00000316534 ATRNL1Q5VV63 1379 aa8.39□□□□□ -1.07
NPHP1-201ENST00000316534 A0A1W2PQ27 194 aa8.39□□□□□ -1.07
NPHP1-201ENST00000316534 A0A1W2PQ64 194 aa8.39□□□□□ -1.07
NPHP1-201ENST00000316534 A0A1W2PQD8 194 aa8.39□□□□□ -1.07
NPHP1-201ENST00000316534 GOLGA8BA8MQT2 603 aa8.39□□□□□ -1.07
NPHP1-201ENST00000316534 UFL1O94874 794 aa8.39□□□□□ -1.07
NPHP1-201ENST00000316534 LDHCP07864 332 aa8.39□□□□□ -1.07
NPHP1-201ENST00000316534 KCNA3P22001 575 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms