RNA–Protein interactions for RNA: ENST00000316105.6

PCDHB9-201, Transcript of protocadherin beta 9, humanhuman

APPRIS P1 BASIC

Gene PCDHB9, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-201ENST00000316105 ZNF174Q15697 407 aa15.32■□□□□ 0.04
PCDHB9-201ENST00000316105 RRAGBQ5VZM2 374 aa15.32■□□□□ 0.04
PCDHB9-201ENST00000316105 ZNF654Q8IZM8 581 aa15.32■□□□□ 0.04
PCDHB9-201ENST00000316105 PYM1Q9BRP8 204 aaKnown RBP15.32■□□□□ 0.04
PCDHB9-201ENST00000316105 PIH1D3Q9NQM4 214 aaKnown RBP15.32■□□□□ 0.04
PCDHB9-201ENST00000316105 RBM28Q9NW13 759 aaKnown RBP15.32■□□□□ 0.04
PCDHB9-201ENST00000316105 CUTAO60888 179 aa15.31■□□□□ 0.04
PCDHB9-201ENST00000316105 PDE4CQ08493 712 aa15.31■□□□□ 0.04
PCDHB9-201ENST00000316105 TRAPPC3LQ5T215 181 aa15.31■□□□□ 0.04
PCDHB9-201ENST00000316105 CNBD1Q8NA66 436 aa15.31■□□□□ 0.04
PCDHB9-201ENST00000316105 ERVV-1B6SEH8 477 aa15.31■□□□□ 0.04
PCDHB9-201ENST00000316105 SNAP23O00161 211 aa15.31■□□□□ 0.04
PCDHB9-201ENST00000316105 POLR2DO15514 142 aaKnown RBP15.31■□□□□ 0.04
PCDHB9-201ENST00000316105 CALML3P27482 149 aa15.31■□□□□ 0.04
PCDHB9-201ENST00000316105 APOA5Q6Q788 366 aa15.31■□□□□ 0.04
PCDHB9-201ENST00000316105 KLHL34Q8N239 644 aa15.31■□□□□ 0.04
PCDHB9-201ENST00000316105 CCDC148Q8NFR7 591 aa15.31■□□□□ 0.04
PCDHB9-201ENST00000316105 VWA3AA6NCI4 1184 aa15.31■□□□□ 0.04
PCDHB9-201ENST00000316105 N4BP3O15049 544 aa15.31■□□□□ 0.04
PCDHB9-201ENST00000316105 PFKFB1P16118 471 aa15.31■□□□□ 0.04
PCDHB9-201ENST00000316105 STAT6P42226 847 aa15.31■□□□□ 0.04
PCDHB9-201ENST00000316105 KCNQ4P56696 695 aa15.31■□□□□ 0.04
PCDHB9-201ENST00000316105 CBX1P83916 185 aa15.31■□□□□ 0.04
PCDHB9-201ENST00000316105 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.31■□□□□ 0.04
PCDHB9-201ENST00000316105 RPAP1Q9BWH6 1393 aaPredicted RBP15.31■□□□□ 0.04
PCDHB9-201ENST00000316105 PICALMQ13492 652 aa15.31■□□□□ 0.04
PCDHB9-201ENST00000316105 TAF6LQ9Y6J9 622 aa15.31■□□□□ 0.04
PCDHB9-201ENST00000316105 MAPK8IP2Q13387 824 aaPredicted RBP15.3■□□□□ 0.04
PCDHB9-201ENST00000316105 TMEM266Q2M3C6 531 aa15.3■□□□□ 0.04
PCDHB9-201ENST00000316105 KIAA1468Q9P260 1216 aa15.3■□□□□ 0.04
PCDHB9-201ENST00000316105 MED23Q9ULK4 1368 aa15.3■□□□□ 0.04
PCDHB9-201ENST00000316105 RFX5P48382 616 aaPredicted RBP15.3■□□□□ 0.04
PCDHB9-201ENST00000316105 NDUFA8P51970 172 aa15.3■□□□□ 0.04
PCDHB9-201ENST00000316105 CCDC178Q5BJE1 867 aa15.3■□□□□ 0.04
PCDHB9-201ENST00000316105 SUSD4Q5VX71 490 aa15.3■□□□□ 0.04
PCDHB9-201ENST00000316105 RAB34Q9BZG1 259 aa15.3■□□□□ 0.04
PCDHB9-201ENST00000316105 MON2Q7Z3U7 1717 aa15.3■□□□□ 0.04
PCDHB9-201ENST00000316105 USP17L12C9JPN9 530 aa15.3■□□□□ 0.04
PCDHB9-201ENST00000316105 USP17L21D6R901 530 aa15.3■□□□□ 0.04
PCDHB9-201ENST00000316105 VPS54Q9P1Q0 977 aa15.3■□□□□ 0.04
PCDHB9-201ENST00000316105 C3P01024 1663 aa15.3■□□□□ 0.04
PCDHB9-201ENST00000316105 IDEP14735 1019 aa15.29■□□□□ 0.04
PCDHB9-201ENST00000316105 CASQ1P31415 396 aa15.29■□□□□ 0.04
PCDHB9-201ENST00000316105 NAPAP54920 295 aa15.29■□□□□ 0.04
PCDHB9-201ENST00000316105 HSP90B2PQ58FF3 399 aa15.29■□□□□ 0.04
PCDHB9-201ENST00000316105 RCOR1Q9UKL0 485 aa15.29■□□□□ 0.04
PCDHB9-201ENST00000316105 RFX7Q2KHR2 1363 aa15.29■□□□□ 0.04
PCDHB9-201ENST00000316105 KIF5CO60282 957 aa15.29■□□□□ 0.04
PCDHB9-201ENST00000316105 SAP30BPQ9UHR5 308 aaKnown RBP15.29■□□□□ 0.04
PCDHB9-201ENST00000316105 ZNF609O15014 1411 aa15.29■□□□□ 0.04
PCDHB9-201ENST00000316105 A0A087WWV3 80 aa15.29■□□□□ 0.04
PCDHB9-201ENST00000316105 PRKAB2O43741 272 aa15.29■□□□□ 0.04
PCDHB9-201ENST00000316105 NLRP12P59046 1061 aa15.29■□□□□ 0.04
PCDHB9-201ENST00000316105 GNG11P61952 73 aa15.29■□□□□ 0.04
PCDHB9-201ENST00000316105 SCARF1Q14162 830 aa15.29■□□□□ 0.04
PCDHB9-201ENST00000316105 KIAA1328Q86T90 577 aa15.29■□□□□ 0.04
PCDHB9-201ENST00000316105 RTEL1Q9NZ71 1219 aa15.29■□□□□ 0.04
PCDHB9-201ENST00000316105 DNAI1Q9UI46 699 aa15.29■□□□□ 0.04
PCDHB9-201ENST00000316105 BTBD18B2RXH4 712 aa15.29■□□□□ 0.04
PCDHB9-201ENST00000316105 LRMPQ12912 555 aa15.29■□□□□ 0.04
PCDHB9-201ENST00000316105 RASGRF1Q13972 1273 aa15.29■□□□□ 0.04
PCDHB9-201ENST00000316105 KIF4BQ2VIQ3 1234 aa15.29■□□□□ 0.04
PCDHB9-201ENST00000316105 PPP4R3BQ5MIZ7 849 aa15.29■□□□□ 0.04
PCDHB9-201ENST00000316105 STOX1Q6ZVD7 989 aa15.29■□□□□ 0.04
PCDHB9-201ENST00000316105 TNKSO95271 1327 aa15.29■□□□□ 0.04
PCDHB9-201ENST00000316105 AK9Q5TCS8 1911 aa15.28■□□□□ 0.04
PCDHB9-201ENST00000316105 MEGF6O75095 1541 aa15.28■□□□□ 0.04
PCDHB9-201ENST00000316105 TSGA10IPQ3SY00 556 aa15.28■□□□□ 0.04
PCDHB9-201ENST00000316105 CALML4Q96GE6 196 aa15.28■□□□□ 0.04
PCDHB9-201ENST00000316105 FAM47AQ5JRC9 791 aa15.28■□□□□ 0.04
PCDHB9-201ENST00000316105 FANCBQ8NB91 859 aa15.28■□□□□ 0.04
PCDHB9-201ENST00000316105 CEP89Q96ST8 783 aa15.28■□□□□ 0.04
PCDHB9-201ENST00000316105 CYP19A1P11511 503 aaPredicted RBP15.28■□□□□ 0.04
PCDHB9-201ENST00000316105 ZNF76P36508 570 aa15.28■□□□□ 0.04
PCDHB9-201ENST00000316105 FANCCQ00597 558 aa15.28■□□□□ 0.04
PCDHB9-201ENST00000316105 NOM1Q5C9Z4 860 aaKnown RBP15.28■□□□□ 0.04
PCDHB9-201ENST00000316105 NOSTRINQ8IVI9 506 aa15.28■□□□□ 0.04
PCDHB9-201ENST00000316105 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.28■□□□□ 0.04
PCDHB9-201ENST00000316105 V9GYY5 206 aaPredicted RBP15.28■□□□□ 0.04
PCDHB9-201ENST00000316105 UFL1O94874 794 aa15.27■□□□□ 0.04
PCDHB9-201ENST00000316105 PIK3AP1Q6ZUJ8 805 aa15.27■□□□□ 0.04
PCDHB9-201ENST00000316105 ZNF622Q969S3 477 aaKnown RBP eCLIP15.27■□□□□ 0.04
PCDHB9-201ENST00000316105 TRIM47Q96LD4 638 aa15.27■□□□□ 0.04
PCDHB9-201ENST00000316105 RMND1Q9NWS8 449 aa15.27■□□□□ 0.04
PCDHB9-201ENST00000316105 TRIM28Q13263 835 aaKnown RBP15.27■□□□□ 0.04
PCDHB9-201ENST00000316105 IQUBQ8NA54 791 aa15.27■□□□□ 0.04
PCDHB9-201ENST00000316105 AIFM3Q96NN9 605 aa15.27■□□□□ 0.04
PCDHB9-201ENST00000316105 GJB4Q9NTQ9 266 aa15.27■□□□□ 0.04
PCDHB9-201ENST00000316105 MTIF2P46199 727 aaKnown RBP15.27■□□□□ 0.03
PCDHB9-201ENST00000316105 PNOCQ13519 176 aa15.27■□□□□ 0.03
PCDHB9-201ENST00000316105 USPL1Q5W0Q7 1092 aa15.27■□□□□ 0.03
PCDHB9-201ENST00000316105 ACBD3Q9H3P7 528 aa15.27■□□□□ 0.03
PCDHB9-201ENST00000316105 TMOD2Q9NZR1 351 aa15.27■□□□□ 0.03
PCDHB9-201ENST00000316105 CGNQ9P2M7 1197 aaKnown RBP15.27■□□□□ 0.03
PCDHB9-201ENST00000316105 HLA-DOAP06340 250 aa15.27■□□□□ 0.03
PCDHB9-201ENST00000316105 CMA1P23946 247 aa15.27■□□□□ 0.03
PCDHB9-201ENST00000316105 LCORLQ8N3X6 602 aa15.27■□□□□ 0.03
PCDHB9-201ENST00000316105 CLIC6Q96NY7 704 aa15.27■□□□□ 0.03
PCDHB9-201ENST00000316105 RIMBP2O15034 1052 aa15.26■□□□□ 0.03
PCDHB9-201ENST00000316105 PPP2R5BQ15173 497 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms